| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is ilvB [H]
Identifier: 86748123
GI number: 86748123
Start: 1141411
End: 1143090
Strand: Direct
Name: ilvB [H]
Synonym: RPB_0998
Alternate gene names: 86748123
Gene position: 1141411-1143090 (Clockwise)
Preceding gene: 86748122
Following gene: 86748126
Centisome position: 21.41
GC content: 68.69
Gene sequence:
>1680_bases ATGCATCACATGCTCGAGAGCCGCACCGCCGCCGAGGCGCTGGTCGATCAACTGGCGATCAACGGCGTCAAGCACGTGTT CTGCGTGCCGGGAGAGAGCTTCCTGCCGGTGCTGGACGCGCTGCGCGATCGCGACATCACCATCACCGTCTGCCGCCATG AGGGCGGCGCGGCGATGATGGCGGAGGCGATCGGCAAGGCGACCGGCCAGCCCGGCGTCTGTTTCGTCACCCGCGGGCCG GGGGCGACCAATGCGTCGGCGGGCATTCACGTCGCGCGGCAGGACTCGACGCCGATGATCCTGTTCGTCGGCCAGGTCGA ACGCGCGGTCAAGGAGCGCGAGGCGTTTCAGGAGCTCGACTATCGCGCCGTGTTCGGCAGCATGACGAAATGGACCACCG AGATCGACGATGCCGATCGCGTCACCGAGCTGGTGTCGCGCGCGTTCTACACCGCGACCAGCGGCCGGCCGGGGCCGGTG GTGATCGCGCTGCCGAAGGACGTGCTGAGCGAACGCGTCACCGTCGGCCATGCCCCGGCGTTCAGACCGGTCGAAACCTC GCCCGGCGACGAGGAGATGGACGAACTCGCGGCGCTGCTCGCCGGCGCCGAGCGACCGCTGATCGTGCTCGGCGGCAGCC GCTGGAGCCTGAAGGCGCGCGAGCAGATCGAACAGATCGCGACTCGCACCGGGCTGCCGGTCGCGACCAGCTATCGCCGC GGCACGCTGTTCGACGTGATGCATCCGCGCTATGCGGGTGATCTCGGCCTCGGACCCAATCCGAAGCTGGTGGCGCGCGC CAAGGCAGCCGATCTCGTGGTGCTGATCGGCGGACGGCTGGGCGAAATTCCGTCGCAGGGCTACACCCTGCTCGACAGTC CCGCGCCGCAGACCAAGCTGGTGCACATCCATCCCGGCGCCGAGGAACTCGGCCGGGTGTATCGTCCGCAACTCGCGATC CACGCCTCGCCGGCGCGCTTCGTCGCGGCGCTGGCGAAACGCGACATCGTCGCGCGACCGGAGTGGCGGGACGCCGCCGA CGCGGCGCATGCCGACTATCTCGCCTGGACCGAGACCGCGACGCCGCAGCCCGGCGACGTCAATCTCGGCGAGGTGATGA TTTGGCTGCGCGACAACGTGCCGGCCGACACCATCCTGTGCAACGGCGCCGGCAACTACGCGTCGTGGATTCACCGGTTC TATCGTTTCCGTCACTACATGACCCACATCGCGCCGACCTCGGCCTCGATGGGCTACGGCATGCCGGCCGCGATCGCGAT GCAGCGGCTGCATCCGGAGCGGTTGGTGCTGTCGGTCAATGGCGACGGCGATTTCCTGATGAGCGGTCAGGAATTCGCCA TCGCCGTGCAGTATCGGCTGCCGATCGTCGTGGTGGTCTGCGACAACGGCATGTACGGCACCATCCGGATGCATCAGGAG CGCGAGTTTCCGGGACGCGTCGCCGCCACCGAGCTGCACAATCCGGATTTCGCCGCCTATGCGCGCGCCTTCGGCGGCTT CGGCGCCAATGTCGAGAAGACGGCCGACTTCCCGGCGGCGTTCACCGCGGCGCGCGCCTCCGGCCTGCCGTCGATCATCC ATCTGAAGATCGACCCCGACGCGATCCTCCCCGGCGCGACGCTGTCCGGCATCCGCGCGGCGGCGCTGGAAAAGGCGTAG
Upstream 100 bases:
>100_bases CGAACCCGCCGCGGCTCGCCGACCTCACCGAAACCGAACTCGTGCTCTACGGGCCGTGACGGACACCCGGCCAACGCGAA AGATCATTCAGGGAAACGCC
Downstream 100 bases:
>100_bases GACCGATCGGCTTTGATGGGCTGCTCGCCGCCGGCCGCAGCGTCATCCTGAGGTGCACGACGTGCCGCGCCCTGCGCGGC GCGGCGGGCCTCGAAGGACG
Product: thiamine pyrophosphate protein
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MHHMLESRTAAEALVDQLAINGVKHVFCVPGESFLPVLDALRDRDITITVCRHEGGAAMMAEAIGKATGQPGVCFVTRGP GATNASAGIHVARQDSTPMILFVGQVERAVKEREAFQELDYRAVFGSMTKWTTEIDDADRVTELVSRAFYTATSGRPGPV VIALPKDVLSERVTVGHAPAFRPVETSPGDEEMDELAALLAGAERPLIVLGGSRWSLKAREQIEQIATRTGLPVATSYRR GTLFDVMHPRYAGDLGLGPNPKLVARAKAADLVVLIGGRLGEIPSQGYTLLDSPAPQTKLVHIHPGAEELGRVYRPQLAI HASPARFVAALAKRDIVARPEWRDAADAAHADYLAWTETATPQPGDVNLGEVMIWLRDNVPADTILCNGAGNYASWIHRF YRFRHYMTHIAPTSASMGYGMPAAIAMQRLHPERLVLSVNGDGDFLMSGQEFAIAVQYRLPIVVVVCDNGMYGTIRMHQE REFPGRVAATELHNPDFAAYARAFGGFGANVEKTADFPAAFTAARASGLPSIIHLKIDPDAILPGATLSGIRAAALEKA
Sequences:
>Translated_559_residues MHHMLESRTAAEALVDQLAINGVKHVFCVPGESFLPVLDALRDRDITITVCRHEGGAAMMAEAIGKATGQPGVCFVTRGP GATNASAGIHVARQDSTPMILFVGQVERAVKEREAFQELDYRAVFGSMTKWTTEIDDADRVTELVSRAFYTATSGRPGPV VIALPKDVLSERVTVGHAPAFRPVETSPGDEEMDELAALLAGAERPLIVLGGSRWSLKAREQIEQIATRTGLPVATSYRR GTLFDVMHPRYAGDLGLGPNPKLVARAKAADLVVLIGGRLGEIPSQGYTLLDSPAPQTKLVHIHPGAEELGRVYRPQLAI HASPARFVAALAKRDIVARPEWRDAADAAHADYLAWTETATPQPGDVNLGEVMIWLRDNVPADTILCNGAGNYASWIHRF YRFRHYMTHIAPTSASMGYGMPAAIAMQRLHPERLVLSVNGDGDFLMSGQEFAIAVQYRLPIVVVVCDNGMYGTIRMHQE REFPGRVAATELHNPDFAAYARAFGGFGANVEKTADFPAAFTAARASGLPSIIHLKIDPDAILPGATLSGIRAAALEKA >Mature_559_residues MHHMLESRTAAEALVDQLAINGVKHVFCVPGESFLPVLDALRDRDITITVCRHEGGAAMMAEAIGKATGQPGVCFVTRGP GATNASAGIHVARQDSTPMILFVGQVERAVKEREAFQELDYRAVFGSMTKWTTEIDDADRVTELVSRAFYTATSGRPGPV VIALPKDVLSERVTVGHAPAFRPVETSPGDEEMDELAALLAGAERPLIVLGGSRWSLKAREQIEQIATRTGLPVATSYRR GTLFDVMHPRYAGDLGLGPNPKLVARAKAADLVVLIGGRLGEIPSQGYTLLDSPAPQTKLVHIHPGAEELGRVYRPQLAI HASPARFVAALAKRDIVARPEWRDAADAAHADYLAWTETATPQPGDVNLGEVMIWLRDNVPADTILCNGAGNYASWIHRF YRFRHYMTHIAPTSASMGYGMPAAIAMQRLHPERLVLSVNGDGDFLMSGQEFAIAVQYRLPIVVVVCDNGMYGTIRMHQE REFPGRVAATELHNPDFAAYARAFGGFGANVEKTADFPAAFTAARASGLPSIIHLKIDPDAILPGATLSGIRAAALEKA
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=571, Percent_Identity=25.9194395796848, Blast_Score=152, Evalue=9e-37, Organism=Homo sapiens, GI21361361, Length=548, Percent_Identity=22.8102189781022, Blast_Score=113, Evalue=6e-25, Organism=Escherichia coli, GI1790104, Length=539, Percent_Identity=29.8701298701299, Blast_Score=210, Evalue=2e-55, Organism=Escherichia coli, GI87081685, Length=547, Percent_Identity=27.2394881170018, Blast_Score=196, Evalue=4e-51, Organism=Escherichia coli, GI1786717, Length=545, Percent_Identity=26.4220183486239, Blast_Score=153, Evalue=3e-38, Organism=Escherichia coli, GI1788716, Length=572, Percent_Identity=27.0979020979021, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1787096, Length=544, Percent_Identity=24.4485294117647, Blast_Score=107, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17531299, Length=555, Percent_Identity=25.5855855855856, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17531301, Length=555, Percent_Identity=25.7657657657658, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17542570, Length=565, Percent_Identity=23.1858407079646, Blast_Score=110, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6323755, Length=564, Percent_Identity=27.4822695035461, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6320816, Length=574, Percent_Identity=23.5191637630662, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI19922626, Length=570, Percent_Identity=24.9122807017544, Blast_Score=125, Evalue=6e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 60344; Mature: 60344
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHMLESRTAAEALVDQLAINGVKHVFCVPGESFLPVLDALRDRDITITVCRHEGGAAMM CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCHHHH AEAIGKATGQPGVCFVTRGPGATNASAGIHVARQDSTPMILFVGQVERAVKEREAFQELD HHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHCC YRAVFGSMTKWTTEIDDADRVTELVSRAFYTATSGRPGPVVIALPKDVLSERVTVGHAPA HHHHHCCHHHEECCCCCHHHHHHHHHHHHHEECCCCCCCEEEECCHHHHHCCEEECCCCC FRPVETSPGDEEMDELAALLAGAERPLIVLGGSRWSLKAREQIEQIATRTGLPVATSYRR CCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEECCCC GTLFDVMHPRYAGDLGLGPNPKLVARAKAADLVVLIGGRLGEIPSQGYTLLDSPAPQTKL CCEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCEEECCCCCCCEE VHIHPGAEELGRVYRPQLAIHASPARFVAALAKRDIVARPEWRDAADAAHADYLAWTETA EEECCCHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEECCC TPQPGDVNLGEVMIWLRDNVPADTILCNGAGNYASWIHRFYRFRHYMTHIAPTSASMGYG CCCCCCCCHHHEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC MPAAIAMQRLHPERLVLSVNGDGDFLMSGQEFAIAVQYRLPIVVVVCDNGMYGTIRMHQE CHHHHHHHHCCCEEEEEEECCCCCEEECCCEEEEEEEEECCEEEEEECCCCEEEEEEECC REFPGRVAATELHNPDFAAYARAFGGFGANVEKTADFPAAFTAARASGLPSIIHLKIDPD CCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCC AILPGATLSGIRAAALEKA CCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MHHMLESRTAAEALVDQLAINGVKHVFCVPGESFLPVLDALRDRDITITVCRHEGGAAMM CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCHHHH AEAIGKATGQPGVCFVTRGPGATNASAGIHVARQDSTPMILFVGQVERAVKEREAFQELD HHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHCC YRAVFGSMTKWTTEIDDADRVTELVSRAFYTATSGRPGPVVIALPKDVLSERVTVGHAPA HHHHHCCHHHEECCCCCHHHHHHHHHHHHHEECCCCCCCEEEECCHHHHHCCEEECCCCC FRPVETSPGDEEMDELAALLAGAERPLIVLGGSRWSLKAREQIEQIATRTGLPVATSYRR CCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEECCCC GTLFDVMHPRYAGDLGLGPNPKLVARAKAADLVVLIGGRLGEIPSQGYTLLDSPAPQTKL CCEEECCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCEEECCCCCCCEE VHIHPGAEELGRVYRPQLAIHASPARFVAALAKRDIVARPEWRDAADAAHADYLAWTETA EEECCCHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEECCC TPQPGDVNLGEVMIWLRDNVPADTILCNGAGNYASWIHRFYRFRHYMTHIAPTSASMGYG CCCCCCCCHHHEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC MPAAIAMQRLHPERLVLSVNGDGDFLMSGQEFAIAVQYRLPIVVVVCDNGMYGTIRMHQE CHHHHHHHHCCCEEEEEEECCCCCEEECCCEEEEEEEEECCEEEEEECCCCEEEEEEECC REFPGRVAATELHNPDFAAYARAFGGFGANVEKTADFPAAFTAARASGLPSIIHLKIDPD CCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCC AILPGATLSGIRAAALEKA CCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8366043; 12948626 [H]