| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is fbp [H]
Identifier: 86748072
GI number: 86748072
Start: 1094940
End: 1095971
Strand: Direct
Name: fbp [H]
Synonym: RPB_0947
Alternate gene names: 86748072
Gene position: 1094940-1095971 (Clockwise)
Preceding gene: 86748071
Following gene: 86748073
Centisome position: 20.54
GC content: 67.54
Gene sequence:
>1032_bases ATGGATCAGGGTCAGACGTTATCGCGTCTTTTGGACTCTTACGGGACGGACGCGCGCACGCGCGCGGTTGCCGCGGCTGT CGGCGCGATCGCCGAGGCGTCGATCGAAATCTCCGACCTGATCGGGCAGGGCGCGCTGGCCGGGATCACCGGCGCGGCCC ATGGCGCGAGCAATGCGGACGGCGACGTCCAGAAGGATCTCGACGTCCGCGCCGAGGCCGCCATCGTCGCGGCGCTGAAG AACGTTCCCTATGCGGCATTGGCCTCCGAGGAGTCCGACACGCTGCTGATGGGCGATCCGCAGGCACCGATCTCGATCGC CTACGATCCGCTCGACGGCTCGTCGAATATCGACACCAATATGACGGTCGGGACGATCTTCTCGGTCATTCCGAACGAGC CCGGGGTGGCGCCGTTCACCGCACCGGGCAGCTGCCAGCTCGCCGCCGGCTTCGTGGTCTACGGGCCGCAGACCTCGCTG GTGCTGACGCTCGGCGACGGCGTCGACATCTTTACGCTCGACCGCGCCGCGAAGACCTATCGACTGATCCGCGAGCGCGT CCAGGTGCCGGCCGACACCGCCGAATACGCTATCAACGCCTCCAACCATCGCCACTGGGAGCAGCCGGTGCGCGATTTCG TCGACGAGTGTCTGGCCGGGACCGACGGTCCGCGCGCCAAGAACTTCAACATGCGCTGGATCGGTTCGCTGGTGGCGGAG GCCTATCGCATTCTCACCCGCGGTGGCGTGTTCCTGTATCCGGCGGATTCGCGGCCCGGCTACGGCGAAGGCCGGCTGCG TGTTCTCTACGAGACCCATCCGATGGCATTCGTGATGGAGCAGGCCGGCGGGGCCGCCTCCACCGGCCGCGAACGCGTTC TCGACGTCGTCGCGAGCACGACCCACCAGCGCTCGCCGCTGATCATGGGGTCGAGTGACAAGGTCCATCGTATCGTCGAG CTGCACCTCGATCCGGCCGCGGCCTCACGCACAGCGCCGTTGTTCGGGCGCCGCGGCCTGTTCCGGACCTGA
Upstream 100 bases:
>100_bases GAAAATGAAATTTCTCTTATGCCGTGGTTGAGCCCACAACCCCCGGGTGATGGGCTCGCTGCGACAATTTGGCCGGACGG CGTGGTTGGGGGTTTAAGGG
Downstream 100 bases:
>100_bases ACCAAGTCCCCAATTGTTGGAAATGTGAATCCATGTCCCGTAAGCATCCGATCATCTCGATCACCGGCTCCTCCGGCGCC GGAACGACCTCCGTCAAGCG
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 [H]
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MDQGQTLSRLLDSYGTDARTRAVAAAVGAIAEASIEISDLIGQGALAGITGAAHGASNADGDVQKDLDVRAEAAIVAALK NVPYAALASEESDTLLMGDPQAPISIAYDPLDGSSNIDTNMTVGTIFSVIPNEPGVAPFTAPGSCQLAAGFVVYGPQTSL VLTLGDGVDIFTLDRAAKTYRLIRERVQVPADTAEYAINASNHRHWEQPVRDFVDECLAGTDGPRAKNFNMRWIGSLVAE AYRILTRGGVFLYPADSRPGYGEGRLRVLYETHPMAFVMEQAGGAASTGRERVLDVVASTTHQRSPLIMGSSDKVHRIVE LHLDPAAASRTAPLFGRRGLFRT
Sequences:
>Translated_343_residues MDQGQTLSRLLDSYGTDARTRAVAAAVGAIAEASIEISDLIGQGALAGITGAAHGASNADGDVQKDLDVRAEAAIVAALK NVPYAALASEESDTLLMGDPQAPISIAYDPLDGSSNIDTNMTVGTIFSVIPNEPGVAPFTAPGSCQLAAGFVVYGPQTSL VLTLGDGVDIFTLDRAAKTYRLIRERVQVPADTAEYAINASNHRHWEQPVRDFVDECLAGTDGPRAKNFNMRWIGSLVAE AYRILTRGGVFLYPADSRPGYGEGRLRVLYETHPMAFVMEQAGGAASTGRERVLDVVASTTHQRSPLIMGSSDKVHRIVE LHLDPAAASRTAPLFGRRGLFRT >Mature_343_residues MDQGQTLSRLLDSYGTDARTRAVAAAVGAIAEASIEISDLIGQGALAGITGAAHGASNADGDVQKDLDVRAEAAIVAALK NVPYAALASEESDTLLMGDPQAPISIAYDPLDGSSNIDTNMTVGTIFSVIPNEPGVAPFTAPGSCQLAAGFVVYGPQTSL VLTLGDGVDIFTLDRAAKTYRLIRERVQVPADTAEYAINASNHRHWEQPVRDFVDECLAGTDGPRAKNFNMRWIGSLVAE AYRILTRGGVFLYPADSRPGYGEGRLRVLYETHPMAFVMEQAGGAASTGRERVLDVVASTTHQRSPLIMGSSDKVHRIVE LHLDPAAASRTAPLFGRRGLFRT
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family [H]
Homologues:
Organism=Homo sapiens, GI189083692, Length=326, Percent_Identity=35.2760736196319, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI16579888, Length=326, Percent_Identity=35.2760736196319, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI22907028, Length=320, Percent_Identity=33.4375, Blast_Score=170, Evalue=2e-42, Organism=Escherichia coli, GI1790679, Length=308, Percent_Identity=40.2597402597403, Blast_Score=207, Evalue=9e-55, Organism=Caenorhabditis elegans, GI17508131, Length=304, Percent_Identity=36.8421052631579, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6323409, Length=302, Percent_Identity=36.0927152317881, Blast_Score=191, Evalue=2e-49, Organism=Drosophila melanogaster, GI19921562, Length=319, Percent_Identity=35.1097178683386, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI45550998, Length=319, Percent_Identity=35.1097178683386, Blast_Score=166, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000146 - InterPro: IPR020548 [H]
Pfam domain/function: PF00316 FBPase [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 36410; Mature: 36410
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00124 FBPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQGQTLSRLLDSYGTDARTRAVAAAVGAIAEASIEISDLIGQGALAGITGAAHGASNAD CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEHHHHHCCCHHHHCCCCCCCCCCCC GDVQKDLDVRAEAAIVAALKNVPYAALASEESDTLLMGDPQAPISIAYDPLDGSSNIDTN CCCHHCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCCCCC MTVGTIFSVIPNEPGVAPFTAPGSCQLAAGFVVYGPQTSLVLTLGDGVDIFTLDRAAKTY CCHHHHHEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCEEEEEHHHHHHH RLIRERVQVPADTAEYAINASNHRHWEQPVRDFVDECLAGTDGPRAKNFNMRWIGSLVAE HHHHHHHCCCCCCHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AYRILTRGGVFLYPADSRPGYGEGRLRVLYETHPMAFVMEQAGGAASTGRERVLDVVAST HHHHHHCCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHC THQRSPLIMGSSDKVHRIVELHLDPAAASRTAPLFGRRGLFRT CCCCCCEEECCCCHHEEEEEEEECCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MDQGQTLSRLLDSYGTDARTRAVAAAVGAIAEASIEISDLIGQGALAGITGAAHGASNAD CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEHHHHHCCCHHHHCCCCCCCCCCCC GDVQKDLDVRAEAAIVAALKNVPYAALASEESDTLLMGDPQAPISIAYDPLDGSSNIDTN CCCHHCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCCCCC MTVGTIFSVIPNEPGVAPFTAPGSCQLAAGFVVYGPQTSLVLTLGDGVDIFTLDRAAKTY CCHHHHHEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCEEEEEHHHHHHH RLIRERVQVPADTAEYAINASNHRHWEQPVRDFVDECLAGTDGPRAKNFNMRWIGSLVAE HHHHHHHCCCCCCHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AYRILTRGGVFLYPADSRPGYGEGRLRVLYETHPMAFVMEQAGGAASTGRERVLDVVAST HHHHHHCCCEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHC THQRSPLIMGSSDKVHRIVELHLDPAAASRTAPLFGRRGLFRT CCCCCCEEECCCCHHEEEEEEEECCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA