| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cutM [H]
Identifier: 86748037
GI number: 86748037
Start: 1049511
End: 1050311
Strand: Reverse
Name: cutM [H]
Synonym: RPB_0911
Alternate gene names: 86748037
Gene position: 1050311-1049511 (Counterclockwise)
Preceding gene: 86748038
Following gene: 86748036
Centisome position: 19.7
GC content: 66.54
Gene sequence:
>801_bases ATGTATTCCACCAACTATCACCGCCCCTCGTCGGTCGAGGAAGCCGTCGCGCTGTTCGGCAAGGGCAGCGATCCGAAATA TCTCGCCGGCGGCCACACGCTGCTGCCGGTGATGAAGCAGCGGCTCGCCGGGCCGAGCGACGTCATCGACATCGCCCGCA TCCCGGGGTTGATCGGCATCGAGGCCAGTGCCGACGCGCTGACCATCAAGGCGGCGACCACCTATTACGACATCATGCAC AATGCCGATGTGAAGCGCACGATTCCGGCGATCGCGTATCTCACCTCGGTGCTCGGCGATCCGGCCGTGCGCTATCGCGG CACGATCGGCGGCTCGGTCGCGACCAACGACCCGGCCGCGGACTATCCGGCCGCGGTGCTGGCGCTCAACGCCACGGTGA AGACCAACAAGCGCGAGATCCCGGCCGACCAGTTCTTCAACGGACTGTTCATGACCGCGCTCGAGGACAACGAGATCATC ACGGCGATCTCGTTCCCGATCCCCGAGAAGGCCGGCTATGCCAAGATGCGCAATCCGGCGTCGCGCTTCGCGCTGACCGC GGTGTTCGTCGCCCGGCTGAAGTCCGGCGAGATCCGCGTCGCCGCCACCGGCGCATCGCAGAACGGCGTGATGCGGGTCG GCGTGATCGAGGACGCGCTGAAGGCGAACTGGTCGGCGGCGGCGCTGGACAATGTGAAGGTCTCCGACGACGGCCTGATG GCCGACATCCACGGCAGCTCGGACTATCGCGCCAATCTGATCCGCGTGATGGCGCAACGCGCGGTCGACGCCGCGGGCTG A
Upstream 100 bases:
>100_bases AACGCCATCACCGACGCGATCGGCAACAACAAGCTCGAAATGCCGGCGACGCCCGACCGGGTGTGGCACGCGATCCAAGC GGCCTGAGGGAGGACACAGC
Downstream 100 bases:
>100_bases GCTTCGAGGGCTGTCGCACCGGCGCCCTCTTCACCCTCCCCTGGAGGGGGAGGGTCGGGACGCAGCCCGCGGAAGCGGGG ATGCGGGACGGGGTGGGGTG
Product: carbon-monoxide dehydrogenase
Products: NA
Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MYSTNYHRPSSVEEAVALFGKGSDPKYLAGGHTLLPVMKQRLAGPSDVIDIARIPGLIGIEASADALTIKAATTYYDIMH NADVKRTIPAIAYLTSVLGDPAVRYRGTIGGSVATNDPAADYPAAVLALNATVKTNKREIPADQFFNGLFMTALEDNEII TAISFPIPEKAGYAKMRNPASRFALTAVFVARLKSGEIRVAATGASQNGVMRVGVIEDALKANWSAAALDNVKVSDDGLM ADIHGSSDYRANLIRVMAQRAVDAAG
Sequences:
>Translated_266_residues MYSTNYHRPSSVEEAVALFGKGSDPKYLAGGHTLLPVMKQRLAGPSDVIDIARIPGLIGIEASADALTIKAATTYYDIMH NADVKRTIPAIAYLTSVLGDPAVRYRGTIGGSVATNDPAADYPAAVLALNATVKTNKREIPADQFFNGLFMTALEDNEII TAISFPIPEKAGYAKMRNPASRFALTAVFVARLKSGEIRVAATGASQNGVMRVGVIEDALKANWSAAALDNVKVSDDGLM ADIHGSSDYRANLIRVMAQRAVDAAG >Mature_266_residues MYSTNYHRPSSVEEAVALFGKGSDPKYLAGGHTLLPVMKQRLAGPSDVIDIARIPGLIGIEASADALTIKAATTYYDIMH NADVKRTIPAIAYLTSVLGDPAVRYRGTIGGSVATNDPAADYPAAVLALNATVKTNKREIPADQFFNGLFMTALEDNEII TAISFPIPEKAGYAKMRNPASRFALTAVFVARLKSGEIRVAATGASQNGVMRVGVIEDALKANWSAAALDNVKVSDDGLM ADIHGSSDYRANLIRVMAQRAVDAAG
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1789231, Length=278, Percent_Identity=24.8201438848921, Blast_Score=76, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 28184; Mature: 28184
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSTNYHRPSSVEEAVALFGKGSDPKYLAGGHTLLPVMKQRLAGPSDVIDIARIPGLIGI CCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHCCCEEEE EASADALTIKAATTYYDIMHNADVKRTIPAIAYLTSVLGDPAVRYRGTIGGSVATNDPAA ECCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC DYPAAVLALNATVKTNKREIPADQFFNGLFMTALEDNEIITAISFPIPEKAGYAKMRNPA CCCEEEEEEECEEECCCCCCCHHHHHCCEEEEEECCCCEEEEEECCCCCCCCCHHHCCHH SRFALTAVFVARLKSGEIRVAATGASQNGVMRVGVIEDALKANWSAAALDNVKVSDDGLM HHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEHHHHHHCCCCHHEECCEEECCCCEE ADIHGSSDYRANLIRVMAQRAVDAAG EEECCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYSTNYHRPSSVEEAVALFGKGSDPKYLAGGHTLLPVMKQRLAGPSDVIDIARIPGLIGI CCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHCCCEEEE EASADALTIKAATTYYDIMHNADVKRTIPAIAYLTSVLGDPAVRYRGTIGGSVATNDPAA ECCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC DYPAAVLALNATVKTNKREIPADQFFNGLFMTALEDNEIITAISFPIPEKAGYAKMRNPA CCCEEEEEEECEEECCCCCCCHHHHHCCEEEEEECCCCEEEEEECCCCCCCCCHHHCCHH SRFALTAVFVARLKSGEIRVAATGASQNGVMRVGVIEDALKANWSAAALDNVKVSDDGLM HHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEHHHHHHCCCCHHEECCEEECCCCEE ADIHGSSDYRANLIRVMAQRAVDAAG EEECCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]