| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is cutL [H]
Identifier: 86748038
GI number: 86748038
Start: 1050325
End: 1052667
Strand: Reverse
Name: cutL [H]
Synonym: RPB_0912
Alternate gene names: 86748038
Gene position: 1052667-1050325 (Counterclockwise)
Preceding gene: 86748039
Following gene: 86748037
Centisome position: 19.74
GC content: 66.79
Gene sequence:
>2343_bases ATGGGCATCGAGGGCATCGGCGCGAGCGTCGTGCGCAAGGAAGACCGTCGCTTCATCACCGGCAAGGGCCGCTATGTCGA CGACATCAAGATCATCGGCATGACGCATGCGTATTTCCTGCGCAGCCCGCATGCCCACGCCAGGATCAAGCGCATCGACG TCGAGGCCGCCAAGGCGATGCCTGGGGTGGTCGACGTGCTGACCGGGCAGCAGATCGTCGACGACAAGGTCGGCAATCTG ATCTGCGGCTGGGCGATCCACTCCAAGGACGGCTCGGCGATGAAGATGGGCGCGTGGCCGGCGATGGCGCCGGAGACGGT GCGCTTCGTCGGCCAGGCGGTCGCGGTGGTGATCGCCGAGACCCGAAACCTCGCCCGCGACGCCGCCGAGGCGATCGTGG TGGAGTACGAAGAGCTGCCTGCCGTCGCCGATGTCAAGGCCGCGATCGCGCCCGGCGCGCCGCAGCTTCATCCCGAGGCC CCCGGCAACATCGTCTATGACTGGGAGATCGGCGACCAGAAGGCGGTCGACGAGGCCTTCGGCAAGGCCGCCAATGTGGT GTCGTTCGAACTGACCAACAACCGGCTGGTGCCGAACGCGATGGAGCCGCGCGCCGCACTCGCCGACTACAACGAGGCGG AAGAGCACTTCACGCTGTACACCACGTCGCAAAATCCGCACGTCGCCCGGCTGGTGCTGTCGGCGTTCTACAACATCGCG CCCGAGCACAAGCTGCGGGTGGTGGCGCCCGACGTCGGCGGCGGCTTCGGCTCCAAGATCTTCATCTATCCGGAAGAGAT GGTGGCGCTGTGGGCCTCCAAGAAGGTCGGCCGCCCGGTGAAATGGACCGGCGACCGCAACGAGGCGTTCCTGACCGACG CCCACGGCCGCGACCACGTCTCCAAGGCCGAGATGGCGTTCGACAAGGACAACAAGATGCTGGCGCTGCGGGTGACGACC CACGCCAATTTCGGCGCCTACATGTCGCTGTTCTCGTCCTCGGTACCGACTTATCTCTACGCCACGCTGCTGTCGGGCCA GTACAACATCCCGGCGATCTACACCGAGGTGATCGGCGTCTACACCAACACCACGCCGGTCGACGCCTATCGCGGCGCCG GGCGGCCCGAGGCGTGCTACCTGCTGGAGCGGCTGGTCGAGACCGCGGCGCGGCAGCTCAAGGTCGACCCGGCCGAGCTG CGGCGCAAGAACTTCATCACCCAGTTCCCGCATCAGACCCCGGTGATCATGGCCTACGACATCGGCGACTTCAACGCGTC GCTCGACGCCGCGCTGAAGGCCGCCGACTATGCCGGCTTCCCGGCGCGCAAGGCCAAGGCCAAGGCCGAGGGCAAGCTGC GCGGGCTCGGCTTCTCCTGCTACATCGAGGCCTGCGGCATCGCGCCCTCGAAAGCGGTGGGCTCGCTCGGCGCCGGCGTC GGTCTGTGGGAATCCGCGGAGGTGCGCGTCAACCCGGTCGGCACCATCGAGATCCTGACCGGTTCGCACAGCCACGGCCA GGGCCACGAGACCACCTTCGCCCAATTGGTCGCCGATCGCCTCGGCATTCCGATCAACCAGGTGTCGATCGTGCACGGCG ACACCGACAAGGTGCAGTTCGGCATGGGCACCTACGGCTCGCGCTCCGCCGCGGTCGGCATGTCGGCGATCTTCAAGGCG ATGGAGAAGGTCGAGGCCAAGGCCAAGAAGATCGCGGCGCATCAGCTCGAGGCCAGCGAGGGCGACATCGTCATCGAGAA CGGCGAGTTCAAGGTCACCGGCACCGACAAGTCGATCGCGCTGCCGATGGTGGCGCTGGCCGCCTACACGGCGCACAATC TGCCCGACGGCATGGAGCCCGGCCTGAAGGAGAGCGCGTTCTACGATCCGACCAACTTCACGTTCCCGGCCGGCTCCTAC ATCTGCGAGCTCGAAGTCGATCCCGGCACCGGCAAGACCTCGTTCGTCAATTTCGTCGCGGTCGATGATTTCGGCCGGCT GATCAATCCGATGATCGTCGAAGGCCAGGTCCATGGCGGCCTCGTCCAGGGCATCGGCCAGGCGCTGCTGGAGCAGGCGA TCTACGACGACACCGGCCAGCTCGTCACCGCGTCGTTCATGGACTACGCGATGCCGCGCGCCGACGACGTGCCGTCGTTC AAGGTGTCGCACACCGAGACGCTGTGTCCGGGCAATCCGCTCGGCGTCAAGGGCTGCGGCGAGGCCGGCGCGATCGGCGC CTCGGCGGCGGTGATCAACGCCATCACCGACGCGATCGGCAACAACAAGCTCGAAATGCCGGCGACGCCCGACCGGGTGT GGCACGCGATCCAAGCGGCCTGA
Upstream 100 bases:
>100_bases GCGCTGCCGCCTCCGCCGTTTTCGTCACGTATCAACTCAATCGAGCTGCGCCCGCGTCGTCGACGTCGCGGCCGACGCAG TCGGACAGGGAGCAAACACA
Downstream 100 bases:
>100_bases GGGAGGACACAGCATGTATTCCACCAACTATCACCGCCCCTCGTCGGTCGAGGAAGCCGTCGCGCTGTTCGGCAAGGGCA GCGATCCGAAATATCTCGCC
Product: carbon-monoxide dehydrogenase large subunit
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 780; Mature: 779
Protein sequence:
>780_residues MGIEGIGASVVRKEDRRFITGKGRYVDDIKIIGMTHAYFLRSPHAHARIKRIDVEAAKAMPGVVDVLTGQQIVDDKVGNL ICGWAIHSKDGSAMKMGAWPAMAPETVRFVGQAVAVVIAETRNLARDAAEAIVVEYEELPAVADVKAAIAPGAPQLHPEA PGNIVYDWEIGDQKAVDEAFGKAANVVSFELTNNRLVPNAMEPRAALADYNEAEEHFTLYTTSQNPHVARLVLSAFYNIA PEHKLRVVAPDVGGGFGSKIFIYPEEMVALWASKKVGRPVKWTGDRNEAFLTDAHGRDHVSKAEMAFDKDNKMLALRVTT HANFGAYMSLFSSSVPTYLYATLLSGQYNIPAIYTEVIGVYTNTTPVDAYRGAGRPEACYLLERLVETAARQLKVDPAEL RRKNFITQFPHQTPVIMAYDIGDFNASLDAALKAADYAGFPARKAKAKAEGKLRGLGFSCYIEACGIAPSKAVGSLGAGV GLWESAEVRVNPVGTIEILTGSHSHGQGHETTFAQLVADRLGIPINQVSIVHGDTDKVQFGMGTYGSRSAAVGMSAIFKA MEKVEAKAKKIAAHQLEASEGDIVIENGEFKVTGTDKSIALPMVALAAYTAHNLPDGMEPGLKESAFYDPTNFTFPAGSY ICELEVDPGTGKTSFVNFVAVDDFGRLINPMIVEGQVHGGLVQGIGQALLEQAIYDDTGQLVTASFMDYAMPRADDVPSF KVSHTETLCPGNPLGVKGCGEAGAIGASAAVINAITDAIGNNKLEMPATPDRVWHAIQAA
Sequences:
>Translated_780_residues MGIEGIGASVVRKEDRRFITGKGRYVDDIKIIGMTHAYFLRSPHAHARIKRIDVEAAKAMPGVVDVLTGQQIVDDKVGNL ICGWAIHSKDGSAMKMGAWPAMAPETVRFVGQAVAVVIAETRNLARDAAEAIVVEYEELPAVADVKAAIAPGAPQLHPEA PGNIVYDWEIGDQKAVDEAFGKAANVVSFELTNNRLVPNAMEPRAALADYNEAEEHFTLYTTSQNPHVARLVLSAFYNIA PEHKLRVVAPDVGGGFGSKIFIYPEEMVALWASKKVGRPVKWTGDRNEAFLTDAHGRDHVSKAEMAFDKDNKMLALRVTT HANFGAYMSLFSSSVPTYLYATLLSGQYNIPAIYTEVIGVYTNTTPVDAYRGAGRPEACYLLERLVETAARQLKVDPAEL RRKNFITQFPHQTPVIMAYDIGDFNASLDAALKAADYAGFPARKAKAKAEGKLRGLGFSCYIEACGIAPSKAVGSLGAGV GLWESAEVRVNPVGTIEILTGSHSHGQGHETTFAQLVADRLGIPINQVSIVHGDTDKVQFGMGTYGSRSAAVGMSAIFKA MEKVEAKAKKIAAHQLEASEGDIVIENGEFKVTGTDKSIALPMVALAAYTAHNLPDGMEPGLKESAFYDPTNFTFPAGSY ICELEVDPGTGKTSFVNFVAVDDFGRLINPMIVEGQVHGGLVQGIGQALLEQAIYDDTGQLVTASFMDYAMPRADDVPSF KVSHTETLCPGNPLGVKGCGEAGAIGASAAVINAITDAIGNNKLEMPATPDRVWHAIQAA >Mature_779_residues GIEGIGASVVRKEDRRFITGKGRYVDDIKIIGMTHAYFLRSPHAHARIKRIDVEAAKAMPGVVDVLTGQQIVDDKVGNLI CGWAIHSKDGSAMKMGAWPAMAPETVRFVGQAVAVVIAETRNLARDAAEAIVVEYEELPAVADVKAAIAPGAPQLHPEAP GNIVYDWEIGDQKAVDEAFGKAANVVSFELTNNRLVPNAMEPRAALADYNEAEEHFTLYTTSQNPHVARLVLSAFYNIAP EHKLRVVAPDVGGGFGSKIFIYPEEMVALWASKKVGRPVKWTGDRNEAFLTDAHGRDHVSKAEMAFDKDNKMLALRVTTH ANFGAYMSLFSSSVPTYLYATLLSGQYNIPAIYTEVIGVYTNTTPVDAYRGAGRPEACYLLERLVETAARQLKVDPAELR RKNFITQFPHQTPVIMAYDIGDFNASLDAALKAADYAGFPARKAKAKAEGKLRGLGFSCYIEACGIAPSKAVGSLGAGVG LWESAEVRVNPVGTIEILTGSHSHGQGHETTFAQLVADRLGIPINQVSIVHGDTDKVQFGMGTYGSRSAAVGMSAIFKAM EKVEAKAKKIAAHQLEASEGDIVIENGEFKVTGTDKSIALPMVALAAYTAHNLPDGMEPGLKESAFYDPTNFTFPAGSYI CELEVDPGTGKTSFVNFVAVDDFGRLINPMIVEGQVHGGLVQGIGQALLEQAIYDDTGQLVTASFMDYAMPRADDVPSFK VSHTETLCPGNPLGVKGCGEAGAIGASAAVINAITDAIGNNKLEMPATPDRVWHAIQAA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=790, Percent_Identity=24.6835443037975, Blast_Score=163, Evalue=5e-40, Organism=Homo sapiens, GI91823271, Length=791, Percent_Identity=25.6637168141593, Blast_Score=160, Evalue=5e-39, Organism=Escherichia coli, GI1789230, Length=791, Percent_Identity=28.4450063211125, Blast_Score=262, Evalue=5e-71, Organism=Escherichia coli, GI1789246, Length=827, Percent_Identity=25.7557436517533, Blast_Score=205, Evalue=1e-53, Organism=Escherichia coli, GI1786478, Length=747, Percent_Identity=25.3012048192771, Blast_Score=133, Evalue=4e-32, Organism=Caenorhabditis elegans, GI17540638, Length=799, Percent_Identity=24.0300375469337, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17539860, Length=753, Percent_Identity=25.7636122177955, Blast_Score=145, Evalue=6e-35, Organism=Caenorhabditis elegans, GI32566215, Length=616, Percent_Identity=25.3246753246753, Blast_Score=108, Evalue=9e-24, Organism=Drosophila melanogaster, GI17737937, Length=785, Percent_Identity=27.0063694267516, Blast_Score=147, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 83570; Mature: 83439
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS00969 ANTENNA_COMP_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIEGIGASVVRKEDRRFITGKGRYVDDIKIIGMTHAYFLRSPHAHARIKRIDVEAAKAM CCCCCCCHHHHHHCCCEEEECCCCEECCEEEEEEEHHHHHCCCCCHHEEEEEEHHHHHCC PGVVDVLTGQQIVDDKVGNLICGWAIHSKDGSAMKMGAWPAMAPETVRFVGQAVAVVIAE CCHHHHHCCCHHHHHHHCCEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH TRNLARDAAEAIVVEYEELPAVADVKAAIAPGAPQLHPEAPGNIVYDWEIGDQKAVDEAF HHHHHHHHHHHEEEEHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH GKAANVVSFELTNNRLVPNAMEPRAALADYNEAEEHFTLYTTSQNPHVARLVLSAFYNIA CCCCCEEEEEECCCEECCCCCCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCC PEHKLRVVAPDVGGGFGSKIFIYPEEMVALWASKKVGRPVKWTGDRNEAFLTDAHGRDHV CCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCCCC SKAEMAFDKDNKMLALRVTTHANFGAYMSLFSSSVPTYLYATLLSGQYNIPAIYTEVIGV HHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHEEHHHH YTNTTPVDAYRGAGRPEACYLLERLVETAARQLKVDPAELRRKNFITQFPHQTPVIMAYD CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEE IGDFNASLDAALKAADYAGFPARKAKAKAEGKLRGLGFSCYIEACGIAPSKAVGSLGAGV CCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCEECCCEEEEEEECCCCCHHHHHHCCCCC GLWESAEVRVNPVGTIEILTGSHSHGQGHETTFAQLVADRLGIPINQVSIVHGDTDKVQF CCCCCCCEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEE GMGTYGSRSAAVGMSAIFKAMEKVEAKAKKIAAHQLEASEGDIVIENGEFKVTGTDKSIA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEECCCCCHH LPMVALAAYTAHNLPDGMEPGLKESAFYDPTNFTFPAGSYICELEVDPGTGKTSFVNFVA HHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEE VDDFGRLINPMIVEGQVHGGLVQGIGQALLEQAIYDDTGQLVTASFMDYAMPRADDVPSF ECCHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCE KVSHTETLCPGNPLGVKGCGEAGAIGASAAVINAITDAIGNNKLEMPATPDRVWHAIQAA EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHCC >Mature Secondary Structure GIEGIGASVVRKEDRRFITGKGRYVDDIKIIGMTHAYFLRSPHAHARIKRIDVEAAKAM CCCCCCHHHHHHCCCEEEECCCCEECCEEEEEEEHHHHHCCCCCHHEEEEEEHHHHHCC PGVVDVLTGQQIVDDKVGNLICGWAIHSKDGSAMKMGAWPAMAPETVRFVGQAVAVVIAE CCHHHHHCCCHHHHHHHCCEEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH TRNLARDAAEAIVVEYEELPAVADVKAAIAPGAPQLHPEAPGNIVYDWEIGDQKAVDEAF HHHHHHHHHHHEEEEHHHCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH GKAANVVSFELTNNRLVPNAMEPRAALADYNEAEEHFTLYTTSQNPHVARLVLSAFYNIA CCCCCEEEEEECCCEECCCCCCCHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCC PEHKLRVVAPDVGGGFGSKIFIYPEEMVALWASKKVGRPVKWTGDRNEAFLTDAHGRDHV CCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCCCC SKAEMAFDKDNKMLALRVTTHANFGAYMSLFSSSVPTYLYATLLSGQYNIPAIYTEVIGV HHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHEEHHHH YTNTTPVDAYRGAGRPEACYLLERLVETAARQLKVDPAELRRKNFITQFPHQTPVIMAYD CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEE IGDFNASLDAALKAADYAGFPARKAKAKAEGKLRGLGFSCYIEACGIAPSKAVGSLGAGV CCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCEECCCEEEEEEECCCCCHHHHHHCCCCC GLWESAEVRVNPVGTIEILTGSHSHGQGHETTFAQLVADRLGIPINQVSIVHGDTDKVQF CCCCCCCEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEE GMGTYGSRSAAVGMSAIFKAMEKVEAKAKKIAAHQLEASEGDIVIENGEFKVTGTDKSIA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEEEEECCCCCHH LPMVALAAYTAHNLPDGMEPGLKESAFYDPTNFTFPAGSYICELEVDPGTGKTSFVNFVA HHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEE VDDFGRLINPMIVEGQVHGGLVQGIGQALLEQAIYDDTGQLVTASFMDYAMPRADDVPSF ECCHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCCE KVSHTETLCPGNPLGVKGCGEAGAIGASAAVINAITDAIGNNKLEMPATPDRVWHAIQAA EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]