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The map label for this gene is 86747814

Identifier: 86747814

GI number: 86747814

Start: 772699

End: 773031

Strand: Reverse

Name: 86747814

Synonym: RPB_0688

Alternate gene names: NA

Gene position: 773031-772699 (Counterclockwise)

Preceding gene: 86747815

Following gene: 86747813

Centisome position: 14.5

GC content: 60.66

Gene sequence:

>333_bases
ATGATCCGAAAACATATCATGTCACTCCATCCAGATCCCCTGCTCAAAGAGCTTGGCCTGAGCTTCCGGACAGCGCGGCT
GGCCGCCGGCTTGTCCCAGGAGGAAATCGCTCTTCGAGCAAACATTAGCAGACCCCGCTATCGCGATATTGAAACCGGCG
CCGCGGCTGCTCGCGCAACGACCCTCATCAACATCGCCCGCGCCCTCGGCTTGGAAATGATGTTGATCCCGCAGGCGATG
GTGCCCGCCATCCAGTCGATGCTGCAGCCCGCGGCCGATGATGATGATCGCCCGGCGTTCACGTCGGATGCCGAAGAGGA
AGAACGGCCATGA

Upstream 100 bases:

>100_bases
GTGATCAAGATCTGATTACAGATCATTTCTATAAGAAAGATCTGTAAACGCATCAATTGACAAAGCGATATGATCCGCCT
AGGTGTCATTTCGATCAAAA

Downstream 100 bases:

>100_bases
CTCAGGCTGTCCTCGCGGCCGAGCGAATCCAGTCACTCGATATCTCATTGAACGACCTTCCCGTCGGCACCCTCGTCCGG
ACGCCGGGTGACTACAACGC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: HTH-Type Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Hth-Type Transcriptional Regulator; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MIRKHIMSLHPDPLLKELGLSFRTARLAAGLSQEEIALRANISRPRYRDIETGAAAARATTLINIARALGLEMMLIPQAM
VPAIQSMLQPAADDDDRPAFTSDAEEEERP

Sequences:

>Translated_110_residues
MIRKHIMSLHPDPLLKELGLSFRTARLAAGLSQEEIALRANISRPRYRDIETGAAAARATTLINIARALGLEMMLIPQAM
VPAIQSMLQPAADDDDRPAFTSDAEEEERP
>Mature_110_residues
MIRKHIMSLHPDPLLKELGLSFRTARLAAGLSQEEIALRANISRPRYRDIETGAAAARATTLINIARALGLEMMLIPQAM
VPAIQSMLQPAADDDDRPAFTSDAEEEERP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12121; Mature: 12121

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKHIMSLHPDPLLKELGLSFRTARLAAGLSQEEIALRANISRPRYRDIETGAAAARAT
CCHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHH
TLINIARALGLEMMLIPQAMVPAIQSMLQPAADDDDRPAFTSDAEEEERP
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRKHIMSLHPDPLLKELGLSFRTARLAAGLSQEEIALRANISRPRYRDIETGAAAARAT
CCHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHH
TLINIARALGLEMMLIPQAMVPAIQSMLQPAADDDDRPAFTSDAEEEERP
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA