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The map label for this gene is recR

Identifier: 86747792

GI number: 86747792

Start: 750696

End: 751301

Strand: Reverse

Name: recR

Synonym: RPB_0666

Alternate gene names: 86747792

Gene position: 751301-750696 (Counterclockwise)

Preceding gene: 86747793

Following gene: 86747791

Centisome position: 14.09

GC content: 68.65

Gene sequence:

>606_bases
ATGGCCATTGCGGTCGCAGGCCCCGAGATCGAACGTCTGATCCAGCTTTTGGCGCGGCTGCCGGGGCTCGGCCCGCGCTC
GGCGCGGCGCGCCGCGCTGCATCTGATCAAGAAGCGCGACGCGCTGATGACGCCGCTCGCCTCGGCGCTGCAGGTCGCGA
TCGACAAGATCGAGGTGTGCAAGACCTGCGGCAACATCGATACGCAGAATCCCTGCACGGTGTGCACCGATCCGCGCCGC
GATCCGTCGATCATCGTGGTGGTCGCCGACGTCGCCGATCTGTGGGCGCTCGAACGCGCTTCCGCCACCAATGGCCGCTA
TCACGTGCTCGGCGCGACGCTGTCGCCGCTCGACGGCGTCGGCCCCGACGATCTGACCATCGACGCGCTGGTGGCGCGGG
CCCATGATCCCGCGGTCGGCGAGATCATTTTGGCGCTCAACGCCACGGTCGACGGCCAGACCACGGCGCACTACGTCACC
GACCTGCTGCAGGACGCGAACGTCAAGGTGACACGGCTGGCCCACGGCGTCCCGGTCGGCGGCGAACTCGACTATCTCGA
CGAAGGCACGCTGTCGGCCGCGATGCGGCAGCGGACCCTGTTCTGA

Upstream 100 bases:

>100_bases
CTTCCAGAAATACCGATTCGCAATTTCTCGCCGGCGGGCCGGCGGGCGTCTCCCAACGCCTGCCGTCGCTCTGATTCACC
GAAACGGATAAGCTGTCCCG

Downstream 100 bases:

>100_bases
ACCACCGGAAATGGACCTGATGATCGAACGACTGCTGAAATCCTCGCTGATTGTCGCCGCGCTGATGGTGCTCCCGGTCC
CGCCAGCGCTTGCGCAGGCC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MAIAVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKRDALMTPLASALQVAIDKIEVCKTCGNIDTQNPCTVCTDPRR
DPSIIVVVADVADLWALERASATNGRYHVLGATLSPLDGVGPDDLTIDALVARAHDPAVGEIILALNATVDGQTTAHYVT
DLLQDANVKVTRLAHGVPVGGELDYLDEGTLSAAMRQRTLF

Sequences:

>Translated_201_residues
MAIAVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKRDALMTPLASALQVAIDKIEVCKTCGNIDTQNPCTVCTDPRR
DPSIIVVVADVADLWALERASATNGRYHVLGATLSPLDGVGPDDLTIDALVARAHDPAVGEIILALNATVDGQTTAHYVT
DLLQDANVKVTRLAHGVPVGGELDYLDEGTLSAAMRQRTLF
>Mature_200_residues
AIAVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKRDALMTPLASALQVAIDKIEVCKTCGNIDTQNPCTVCTDPRRD
PSIIVVVADVADLWALERASATNGRYHVLGATLSPLDGVGPDDLTIDALVARAHDPAVGEIILALNATVDGQTTAHYVTD
LLQDANVKVTRLAHGVPVGGELDYLDEGTLSAAMRQRTLF

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=192, Percent_Identity=42.1875, Blast_Score=157, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_RHOP2 (Q2J2D3)

Other databases:

- EMBL:   CP000250
- RefSeq:   YP_484288.1
- ProteinModelPortal:   Q2J2D3
- SMR:   Q2J2D3
- STRING:   Q2J2D3
- GeneID:   3908593
- GenomeReviews:   CP000250_GR
- KEGG:   rpb:RPB_0666
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   RPAL316058:RPB_0666-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21341; Mature: 21210

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIAVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKRDALMTPLASALQVAIDKIEVC
CEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTCGNIDTQNPCTVCTDPRRDPSIIVVVADVADLWALERASATNGRYHVLGATLSPLDGV
HHHCCCCCCCCEEECCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
GPDDLTIDALVARAHDPAVGEIILALNATVDGQTTAHYVTDLLQDANVKVTRLAHGVPVG
CCCCHHHHHHHHHCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCC
GELDYLDEGTLSAAMRQRTLF
CCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AIAVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKRDALMTPLASALQVAIDKIEVC
EEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTCGNIDTQNPCTVCTDPRRDPSIIVVVADVADLWALERASATNGRYHVLGATLSPLDGV
HHHCCCCCCCCEEECCCCCCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCCCCCC
GPDDLTIDALVARAHDPAVGEIILALNATVDGQTTAHYVTDLLQDANVKVTRLAHGVPVG
CCCCHHHHHHHHHCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCC
GELDYLDEGTLSAAMRQRTLF
CCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA