| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is ybaB [C]
Identifier: 86747793
GI number: 86747793
Start: 751403
End: 751723
Strand: Reverse
Name: ybaB [C]
Synonym: RPB_0667
Alternate gene names: 86747793
Gene position: 751723-751403 (Counterclockwise)
Preceding gene: 86747794
Following gene: 86747792
Centisome position: 14.1
GC content: 66.98
Gene sequence:
>321_bases ATGGCTGATTTCCTCGGCATGATGAAACAGGCGGCGCAGCTGCAGTCGAAGATGAAGGCGATGCAGGCGGAGCTCGATCA GATCGAGGTCGAAGGCCTGTCCGGCGGCGGCCTGGTCAAGATCCGGATGAGCGCCAAGATGGAAGTGCGCGGCGTTTCGA TCGACCCGTCGCTGCTGAAGGCGGACGAAGGCGAGGTGCTGGAGGATCTGCTGGTCGCGGCGCTCGCCGACGCGCATCGC AAGGCGGAAGCGGCGATGCAGGAGAAGATGCAGGCGCTGACCGGCGGGCTCGGCCTGCCGCCCGGCCTCGGGCTGGGCTA G
Upstream 100 bases:
>100_bases GAGCCGGCCCAGACCGATGCTGGTATCGAAGGCGCCGTCGATCCGGTCGACGACGACGACGATTCTTGAGAATTCTGGCT CTTTCGAGAAGGAACAGATC
Downstream 100 bases:
>100_bases TCTTCCAGAAATACCGATTCGCAATTTCTCGCCGGCGGGCCGGCGGGCGTCTCCCAACGCCTGCCGTCGCTCTGATTCAC CGAAACGGATAAGCTGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MADFLGMMKQAAQLQSKMKAMQAELDQIEVEGLSGGGLVKIRMSAKMEVRGVSIDPSLLKADEGEVLEDLLVAALADAHR KAEAAMQEKMQALTGGLGLPPGLGLG
Sequences:
>Translated_106_residues MADFLGMMKQAAQLQSKMKAMQAELDQIEVEGLSGGGLVKIRMSAKMEVRGVSIDPSLLKADEGEVLEDLLVAALADAHR KAEAAMQEKMQALTGGLGLPPGLGLG >Mature_105_residues ADFLGMMKQAAQLQSKMKAMQAELDQIEVEGLSGGGLVKIRMSAKMEVRGVSIDPSLLKADEGEVLEDLLVAALADAHRK AEAAMQEKMQALTGGLGLPPGLGLG
Specific function: Unknown
COG id: COG0718
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0133 family [H]
Homologues:
Organism=Escherichia coli, GI1786677, Length=100, Percent_Identity=49, Blast_Score=96, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004401 [H]
Pfam domain/function: PF02575 DUF149 [H]
EC number: NA
Molecular weight: Translated: 11107; Mature: 10976
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.5 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.6 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFLGMMKQAAQLQSKMKAMQAELDQIEVEGLSGGGLVKIRMSAKMEVRGVSIDPSLLK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCHHHHC ADEGEVLEDLLVAALADAHRKAEAAMQEKMQALTGGLGLPPGLGLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure ADFLGMMKQAAQLQSKMKAMQAELDQIEVEGLSGGGLVKIRMSAKMEVRGVSIDPSLLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCHHHHC ADEGEVLEDLLVAALADAHRKAEAAMQEKMQALTGGLGLPPGLGLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA