| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747791
Identifier: 86747791
GI number: 86747791
Start: 750251
End: 750685
Strand: Reverse
Name: 86747791
Synonym: RPB_0665
Alternate gene names: NA
Gene position: 750685-750251 (Counterclockwise)
Preceding gene: 86747792
Following gene: 86747787
Centisome position: 14.08
GC content: 67.13
Gene sequence:
>435_bases ATGGACCTGATGATCGAACGACTGCTGAAATCCTCGCTGATTGTCGCCGCGCTGATGGTGCTCCCGGTCCCGCCAGCGCT TGCGCAGGCCGCCGAAAGTCAGGCGGCGCTGCCGAAGCCGAAGGCGATGAAGGTGGGCGACGTGCTCAGCGGCGAACTCA CCGCGATGCGCTCGCGCGCCAGGGCCAAGGGCAAGAAGGTGCCGGTGTATCAGCTCGTCAGCGAGCCGCGCCGGCTGCCG CCGCCGTCCGGCCTGTGCAATCTCGAGAACGGGCCGGAAACCTTCCAGATCGTGCCGGCCAGCGACGCCCAGGCGGCGCA GCTCAAATCGCATCTCGGCAAGAACGTGGCGCTGAAGGTCGAATCCGTCGCCTGCGCCGAGGAGGCCGGGCAGTACAGCG AGGCCGTGGTGACGAAGTGGAGCCTGGTGAACTAA
Upstream 100 bases:
>100_bases CTGGCCCACGGCGTCCCGGTCGGCGGCGAACTCGACTATCTCGACGAAGGCACGCTGTCGGCCGCGATGCGGCAGCGGAC CCTGTTCTGAACCACCGGAA
Downstream 100 bases:
>100_bases GCAGTTCTGCTTTTGATGGGATCAGCGCTCGCGATCCAGTTGCCGCCGTCATCCTGAGGTGCCCGCTGGGCCGCGCTGTG CGCGGCGCGGCGGGCCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MDLMIERLLKSSLIVAALMVLPVPPALAQAAESQAALPKPKAMKVGDVLSGELTAMRSRARAKGKKVPVYQLVSEPRRLP PPSGLCNLENGPETFQIVPASDAQAAQLKSHLGKNVALKVESVACAEEAGQYSEAVVTKWSLVN
Sequences:
>Translated_144_residues MDLMIERLLKSSLIVAALMVLPVPPALAQAAESQAALPKPKAMKVGDVLSGELTAMRSRARAKGKKVPVYQLVSEPRRLP PPSGLCNLENGPETFQIVPASDAQAAQLKSHLGKNVALKVESVACAEEAGQYSEAVVTKWSLVN >Mature_144_residues MDLMIERLLKSSLIVAALMVLPVPPALAQAAESQAALPKPKAMKVGDVLSGELTAMRSRARAKGKKVPVYQLVSEPRRLP PPSGLCNLENGPETFQIVPASDAQAAQLKSHLGKNVALKVESVACAEEAGQYSEAVVTKWSLVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15283; Mature: 15283
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLMIERLLKSSLIVAALMVLPVPPALAQAAESQAALPKPKAMKVGDVLSGELTAMRSRA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH RAKGKKVPVYQLVSEPRRLPPPSGLCNLENGPETFQIVPASDAQAAQLKSHLGKNVALKV HHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEH ESVACAEEAGQYSEAVVTKWSLVN HHHHHHHHHCCHHHHHHHHHCCCC >Mature Secondary Structure MDLMIERLLKSSLIVAALMVLPVPPALAQAAESQAALPKPKAMKVGDVLSGELTAMRSRA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH RAKGKKVPVYQLVSEPRRLPPPSGLCNLENGPETFQIVPASDAQAAQLKSHLGKNVALKV HHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEH ESVACAEEAGQYSEAVVTKWSLVN HHHHHHHHHCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA