| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86747591
Identifier: 86747591
GI number: 86747591
Start: 513420
End: 513947
Strand: Direct
Name: 86747591
Synonym: RPB_0465
Alternate gene names: NA
Gene position: 513420-513947 (Clockwise)
Preceding gene: 86747590
Following gene: 86747592
Centisome position: 9.63
GC content: 70.64
Gene sequence:
>528_bases ATGACCGCGCCGGGCGCGCCCAGCATTCACGCCTCCGCCGTCCGGGTCGGCGACCGCGCGGTGCTGATCCGCGGGCCCTC CGGCTCCGGTAAATCCCGCCTCGCCTTCGGGCTGATCGTCGCAGGACGGGCGGGGCAGATCCCGCCGGTGGAACTGATCG GCGACGATCGGGTCTTTCTGGAACAGCGCGACGGCCGGCTGCGGGTCCGCCCGGTGCCGGGTCTCGCGGGGATGATCGAG GTCCGGGGCCTCGGCCTCCGCCGGGTTCCGGCCGCCCCGGAGGCGGTCGTCGGCCTGGTCGTCGACCTCGCCGCGGAGGA CGCCGCCCGCCTTCCCGAAGCGGCCGCGTTGCGTATGATGCTGGAGGGCGTCGAATTGCCGCGGGTGCCGGTCGGTCCCG GCTATGATCCGCTACCACTGGTCGTCGCGGCGCTGACGACCGGCGACGCCATCGCACCTGGGACACAGTTGGATGATTGC CGGAAGGATTTTGGTAACCATATGAGCCACACAATCGTCACTGAATAG
Upstream 100 bases:
>100_bases ATGGTGGCAAAATCCGCGCCGAGAATCGCCCCGGCCCGCGCGATGCGGAGGGCGAGCCGACCATCGCCGGCGCCCGCTTC GTGGTCCGGCTGCCGTCGAC
Downstream 100 bases:
>100_bases ACCCGCCCCGGTTCCCGATTTGCCCCCGTCTTCGAGGGTGAATCGCGAAAACCCCCTTGCATAGGGGCTCTGGATGGTCA AAGTGACCCGTTCGCGCGGT
Product: HPr kinase
Products: NA
Alternate protein names: PTS System Hpr Kinase; HPr Kinase/Phosphorylase
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTAPGAPSIHASAVRVGDRAVLIRGPSGSGKSRLAFGLIVAGRAGQIPPVELIGDDRVFLEQRDGRLRVRPVPGLAGMIE VRGLGLRRVPAAPEAVVGLVVDLAAEDAARLPEAAALRMMLEGVELPRVPVGPGYDPLPLVVAALTTGDAIAPGTQLDDC RKDFGNHMSHTIVTE
Sequences:
>Translated_175_residues MTAPGAPSIHASAVRVGDRAVLIRGPSGSGKSRLAFGLIVAGRAGQIPPVELIGDDRVFLEQRDGRLRVRPVPGLAGMIE VRGLGLRRVPAAPEAVVGLVVDLAAEDAARLPEAAALRMMLEGVELPRVPVGPGYDPLPLVVAALTTGDAIAPGTQLDDC RKDFGNHMSHTIVTE >Mature_174_residues TAPGAPSIHASAVRVGDRAVLIRGPSGSGKSRLAFGLIVAGRAGQIPPVELIGDDRVFLEQRDGRLRVRPVPGLAGMIEV RGLGLRRVPAAPEAVVGLVVDLAAEDAARLPEAAALRMMLEGVELPRVPVGPGYDPLPLVVAALTTGDAIAPGTQLDDCR KDFGNHMSHTIVTE
Specific function: Unknown
COG id: COG1493
COG function: function code T; Serine kinase of the HPr protein, regulates carbohydrate metabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18185; Mature: 18054
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPGAPSIHASAVRVGDRAVLIRGPSGSGKSRLAFGLIVAGRAGQIPPVELIGDDRVFL CCCCCCCCCCCEEEEECCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEECCCEEEE EQRDGRLRVRPVPGLAGMIEVRGLGLRRVPAAPEAVVGLVVDLAAEDAARLPEAAALRMM EECCCEEEEEECCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH LEGVELPRVPVGPGYDPLPLVVAALTTGDAIAPGTQLDDCRKDFGNHMSHTIVTE HHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEECC >Mature Secondary Structure TAPGAPSIHASAVRVGDRAVLIRGPSGSGKSRLAFGLIVAGRAGQIPPVELIGDDRVFL CCCCCCCCCCEEEEECCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEEECCCEEEE EQRDGRLRVRPVPGLAGMIEVRGLGLRRVPAAPEAVVGLVVDLAAEDAARLPEAAALRMM EECCCEEEEEECCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH LEGVELPRVPVGPGYDPLPLVVAALTTGDAIAPGTQLDDCRKDFGNHMSHTIVTE HHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA