| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747399
Identifier: 86747399
GI number: 86747399
Start: 307937
End: 308476
Strand: Reverse
Name: 86747399
Synonym: RPB_0273
Alternate gene names: NA
Gene position: 308476-307937 (Counterclockwise)
Preceding gene: 86747400
Following gene: 86747396
Centisome position: 5.79
GC content: 67.22
Gene sequence:
>540_bases ATGAAGCGCCGCCTGCTGCAACCGCTGTGGTTCATCCTCGCCGTCCTCTTTCTGGTCGAGGCATGGCTGTGGGAGCATCT CGAGCCGTGGGTGGAGCGCATCGTCGCGGCACTCCCGCTGCGCGAGCTGAAAGCGTGGACGGCGGAGCGCGTCGCGCATC TGTCGCCGCCGCTGGCGCTGGTGGTGTTCGCGGTGCCGCTGATCCCGCTGTATCCGTTCAAGCTGTTCGCGCTGTGGCTG ATGGCGACGCAGCACTTCATCGCCGGCCTTCTCGCCTTCGTGCTGGCGCAGTTCGTCGGCCTCGGGCTGATCGCCTTCAT CTTCGACGTCACCAAGCCGAAGCTGATGCAGATGGCGTGGTTCGTGCGCGCCTATCAGTTCGTGCTGGCGATCAAGGCCA AGGCGCATGCGATCGTGGCGCCGGTGATGGCGGCGATCCGGGCCCGGATCAGCGCGCTGATCGGCGAAGGCGACGGCCCG ATGCAGCGGCTGCTGCGCAAGGCGATGCAAGTCCGCAAGCGGATCCGCGCCTCGCGCTGA
Upstream 100 bases:
>100_bases CACCCGCTCCGAAGCGGTCAAGGAAGCCGCGCTTGCGGTCGGAAAACGCGCCATCCATATGTAAACGAGTGCCGGCATCG TCCGGAAACCGGACGACTCC
Downstream 100 bases:
>100_bases GCCTCGCGTGCCGAGGCTGCGTCACAGCGACGATGTCAGAACAGGTGCACCGCATGCGGCGCGAACAGGCCGATCGCGGT GAAAGCCAGCCCCCCCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MKRRLLQPLWFILAVLFLVEAWLWEHLEPWVERIVAALPLRELKAWTAERVAHLSPPLALVVFAVPLIPLYPFKLFALWL MATQHFIAGLLAFVLAQFVGLGLIAFIFDVTKPKLMQMAWFVRAYQFVLAIKAKAHAIVAPVMAAIRARISALIGEGDGP MQRLLRKAMQVRKRIRASR
Sequences:
>Translated_179_residues MKRRLLQPLWFILAVLFLVEAWLWEHLEPWVERIVAALPLRELKAWTAERVAHLSPPLALVVFAVPLIPLYPFKLFALWL MATQHFIAGLLAFVLAQFVGLGLIAFIFDVTKPKLMQMAWFVRAYQFVLAIKAKAHAIVAPVMAAIRARISALIGEGDGP MQRLLRKAMQVRKRIRASR >Mature_179_residues MKRRLLQPLWFILAVLFLVEAWLWEHLEPWVERIVAALPLRELKAWTAERVAHLSPPLALVVFAVPLIPLYPFKLFALWL MATQHFIAGLLAFVLAQFVGLGLIAFIFDVTKPKLMQMAWFVRAYQFVLAIKAKAHAIVAPVMAAIRARISALIGEGDGP MQRLLRKAMQVRKRIRASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20443; Mature: 20443
Theoretical pI: Translated: 11.88; Mature: 11.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRLLQPLWFILAVLFLVEAWLWEHLEPWVERIVAALPLRELKAWTAERVAHLSPPLAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VVFAVPLIPLYPFKLFALWLMATQHFIAGLLAFVLAQFVGLGLIAFIFDVTKPKLMQMAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH FVRAYQFVLAIKAKAHAIVAPVMAAIRARISALIGEGDGPMQRLLRKAMQVRKRIRASR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRRLLQPLWFILAVLFLVEAWLWEHLEPWVERIVAALPLRELKAWTAERVAHLSPPLAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VVFAVPLIPLYPFKLFALWLMATQHFIAGLLAFVLAQFVGLGLIAFIFDVTKPKLMQMAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH FVRAYQFVLAIKAKAHAIVAPVMAAIRARISALIGEGDGPMQRLLRKAMQVRKRIRASR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA