| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is fhuA [H]
Identifier: 86747229
GI number: 86747229
Start: 109910
End: 112177
Strand: Reverse
Name: fhuA [H]
Synonym: RPB_0102
Alternate gene names: 86747229
Gene position: 112177-109910 (Counterclockwise)
Preceding gene: 86747235
Following gene: 86747228
Centisome position: 2.1
GC content: 64.86
Gene sequence:
>2268_bases ATGTCTCCCTCTCCGACTGCTTCCGGGCGCAACCGTCGCCTGCTGTCCTCCGTCGCCCTGACGGCTCTGCTGTGGCCCGC TGCCGGCCACGCCCAATCCGCGCCGCGCGGCCTCGACCCGATCGTGGTCGAAGGCCAGACCGCGCGGCCGTCCAAGCCGC GCGCGGCTTCGTCCGCGGCCGGCTCGTCGCGGACGCGCCGGGCCTCGGCGCCCGCGTCACGCCCGCCTGCCGCGCCTGCT GCCGCGCCGTCAGCCGCCGTCGCAGCCGTGCCGACCTTCAATCTCGGCACGATGGCATCGACCGCCAGCCGCCTCGGATT GACGCCGCTGCAGACCCCCGCCTCCGTCGACATCATCACCGCACAGACCATCGCCGAGCGCGGCCAGCGCGATGTGCTCG ACGCGGTCACTCAGAACGCCACAGGCATCACGGCAACACCGGAGCCGGGCAATGGCGGCGTGGTGTTCTCGACCCGCGGT TTCAGCGGCACCGGTTCGGTGATGACCCTGTATGACGGCACCCGCCTGTATGTCGGCGCCGGCACCGTGACCTTCCCGTT CGACACCTGGTCGGCCGAGCGCATCGAGGTGCTACGCGGCCCCGCCTCGGTGATGTACGGCGAAGGCGCGATCGGCGGCG CCATCAACGTGATCACCAAGCAGCCGCTCGACGTGCAGCGCAACCAGGCCGAAGTGTCGCTCGACACCAATCTGACGCGA CGGATCGCGGTCGACTCCGGTGGTCCGATCAACAAGGATGTCTCCTATCGCATCACCGCCACCGGCAACATGTCCGACGG TTGGGTCGATCGCGACAAGACTTCGAACATCGCCGTCTCGGCCGCCGTCAAGGTGAAGCAGACCGACCACCTGACCTGGA CCCTGTCCACCGCCTATGGCGACCGCCACCCGTCGCTGTATTACGGCACGCCGCTGGTCAATGGCCGGCTCGACGAATCG CTGCGTTTCAAGAACTACAACGTCGGCGACAGCAGCATCCGCTATCAGGACAGCTGGACGCAGTTGAAGTCCGAGTGGCA GGTGACCGACAGCATCACCGTCCGCAACGCGCTGTACTATCTGAACAGCCGCAGGCACTGGAAGAGCGCGGAGGAATACG CCTTCAACCCGACCACCCGCCAGGTCGACCGCAGCACTTATCTGGAGATCTTCCACGACCAGCAGCAGATTGGCGACCGC ATGGATGCGACGGTGCGCGGCCATCTGTTCGGACTGGAAAACACCTTTGTCGCCGGGTTCGACGTCAACCGCATCAACTT CAAGCACACCAATAATTCGCCCTACGGCGGAACGTCGTCGGTCGATCCGTACAATTTCGATCCGGGCTTGTTTGCGAGCC CGGATCTGACACGACCGGGCTATTCCAGCGTCACCAATCAGTATGCGGTGTTCGCCGAGAACCGTCTGCAACTCACCGAG CAATTGGCGCTGATCGGCGGCATCCGGCAGGACCAGCCGACCGTGGAGCGGACCGATCTGCGAAACCCGGCTAACAATTA CACCCGATCGTATTCTTCGACGACGTGGCGGGCCGGGGCGGTGTACACGCCGATCCAGGACCTCGCCTTCTACGGCCAAT ATTCGACCGCGGTCGATCCGGTCGGCGGTTTGGTGACGGCGAGCAACGCCAATGCGAAGTTCGAACTGGCGACCGGCAAG CAGGTCGAGATCGGCGTCAAGCAATCGTTCTGGGGCGGGCGTGGCGAGTGGACCCTGGCGGGCTACCACATCGTCAAGAA CAACCTGCTTGCGCGCTCTTCGGAAGATCCAGATCAGGTCGTCCAAGTCGGGCAGCAATCGTCACGCGGTATCGAAGCGT CGGTTGGCTTGGCGCTCGACCACGGTTGGCGGGTCGACGCCAACACCACCTTCCTGCAGGCGAAATACGACGACTTCGTG CAGTCAGTTAATGACGTGGGCGTGAACTTCGCCGGCAACGTGCCGATCAACGTGCCGCTCAACGTCTCGAACGCGTGGCT GACCTGGGCGTTTGCGGCCGGCTGGTCCGCCAATGCCGGCGTGCAGGTGGTCGGCAAGCGCTTTGCCGACGCCGCCAACA CGCTGGAGATGCCGGGCTACACGCTTGTCAATGCCGGTCTGCAGTGGAAGCCGGACGCCGCCTCGACGCTATCGCTGCGG CTCTACAACATCTTCGACAAGGTCTATGCGACGTCGAGCTATGTCGACAACCAATGGCTGCTGGGGCGGCCCCGCACCGC GGAGCTGTCTTACAACGTCAAGTTCTGA
Upstream 100 bases:
>100_bases GCATCGGGCGGGGTGTCCTGGTGAGTGTCGAACTGCGGCCGTCCGGCTGCGGCAAGGCCTTGGCTTGCGGTGACGTGCCA CGTTAACCGCGAGTCCCTCG
Downstream 100 bases:
>100_bases CGATGCGCCGCATCACCAGGCGGCTGAAGCGGTGGCTGTATCTCGGCCACCGCTGGCTCGGGATCGCGTGCTGTCTGTTG TTCGCGATCTGGTTCATCTC
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 755; Mature: 754
Protein sequence:
>755_residues MSPSPTASGRNRRLLSSVALTALLWPAAGHAQSAPRGLDPIVVEGQTARPSKPRAASSAAGSSRTRRASAPASRPPAAPA AAPSAAVAAVPTFNLGTMASTASRLGLTPLQTPASVDIITAQTIAERGQRDVLDAVTQNATGITATPEPGNGGVVFSTRG FSGTGSVMTLYDGTRLYVGAGTVTFPFDTWSAERIEVLRGPASVMYGEGAIGGAINVITKQPLDVQRNQAEVSLDTNLTR RIAVDSGGPINKDVSYRITATGNMSDGWVDRDKTSNIAVSAAVKVKQTDHLTWTLSTAYGDRHPSLYYGTPLVNGRLDES LRFKNYNVGDSSIRYQDSWTQLKSEWQVTDSITVRNALYYLNSRRHWKSAEEYAFNPTTRQVDRSTYLEIFHDQQQIGDR MDATVRGHLFGLENTFVAGFDVNRINFKHTNNSPYGGTSSVDPYNFDPGLFASPDLTRPGYSSVTNQYAVFAENRLQLTE QLALIGGIRQDQPTVERTDLRNPANNYTRSYSSTTWRAGAVYTPIQDLAFYGQYSTAVDPVGGLVTASNANAKFELATGK QVEIGVKQSFWGGRGEWTLAGYHIVKNNLLARSSEDPDQVVQVGQQSSRGIEASVGLALDHGWRVDANTTFLQAKYDDFV QSVNDVGVNFAGNVPINVPLNVSNAWLTWAFAAGWSANAGVQVVGKRFADAANTLEMPGYTLVNAGLQWKPDAASTLSLR LYNIFDKVYATSSYVDNQWLLGRPRTAELSYNVKF
Sequences:
>Translated_755_residues MSPSPTASGRNRRLLSSVALTALLWPAAGHAQSAPRGLDPIVVEGQTARPSKPRAASSAAGSSRTRRASAPASRPPAAPA AAPSAAVAAVPTFNLGTMASTASRLGLTPLQTPASVDIITAQTIAERGQRDVLDAVTQNATGITATPEPGNGGVVFSTRG FSGTGSVMTLYDGTRLYVGAGTVTFPFDTWSAERIEVLRGPASVMYGEGAIGGAINVITKQPLDVQRNQAEVSLDTNLTR RIAVDSGGPINKDVSYRITATGNMSDGWVDRDKTSNIAVSAAVKVKQTDHLTWTLSTAYGDRHPSLYYGTPLVNGRLDES LRFKNYNVGDSSIRYQDSWTQLKSEWQVTDSITVRNALYYLNSRRHWKSAEEYAFNPTTRQVDRSTYLEIFHDQQQIGDR MDATVRGHLFGLENTFVAGFDVNRINFKHTNNSPYGGTSSVDPYNFDPGLFASPDLTRPGYSSVTNQYAVFAENRLQLTE QLALIGGIRQDQPTVERTDLRNPANNYTRSYSSTTWRAGAVYTPIQDLAFYGQYSTAVDPVGGLVTASNANAKFELATGK QVEIGVKQSFWGGRGEWTLAGYHIVKNNLLARSSEDPDQVVQVGQQSSRGIEASVGLALDHGWRVDANTTFLQAKYDDFV QSVNDVGVNFAGNVPINVPLNVSNAWLTWAFAAGWSANAGVQVVGKRFADAANTLEMPGYTLVNAGLQWKPDAASTLSLR LYNIFDKVYATSSYVDNQWLLGRPRTAELSYNVKF >Mature_754_residues SPSPTASGRNRRLLSSVALTALLWPAAGHAQSAPRGLDPIVVEGQTARPSKPRAASSAAGSSRTRRASAPASRPPAAPAA APSAAVAAVPTFNLGTMASTASRLGLTPLQTPASVDIITAQTIAERGQRDVLDAVTQNATGITATPEPGNGGVVFSTRGF SGTGSVMTLYDGTRLYVGAGTVTFPFDTWSAERIEVLRGPASVMYGEGAIGGAINVITKQPLDVQRNQAEVSLDTNLTRR IAVDSGGPINKDVSYRITATGNMSDGWVDRDKTSNIAVSAAVKVKQTDHLTWTLSTAYGDRHPSLYYGTPLVNGRLDESL RFKNYNVGDSSIRYQDSWTQLKSEWQVTDSITVRNALYYLNSRRHWKSAEEYAFNPTTRQVDRSTYLEIFHDQQQIGDRM DATVRGHLFGLENTFVAGFDVNRINFKHTNNSPYGGTSSVDPYNFDPGLFASPDLTRPGYSSVTNQYAVFAENRLQLTEQ LALIGGIRQDQPTVERTDLRNPANNYTRSYSSTTWRAGAVYTPIQDLAFYGQYSTAVDPVGGLVTASNANAKFELATGKQ VEIGVKQSFWGGRGEWTLAGYHIVKNNLLARSSEDPDQVVQVGQQSSRGIEASVGLALDHGWRVDANTTFLQAKYDDFVQ SVNDVGVNFAGNVPINVPLNVSNAWLTWAFAAGWSANAGVQVVGKRFADAANTLEMPGYTLVNAGLQWKPDAASTLSLRL YNIFDKVYATSSYVDNQWLLGRPRTAELSYNVKF
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=722, Percent_Identity=23.2686980609418, Blast_Score=123, Evalue=4e-29, Organism=Escherichia coli, GI1787024, Length=713, Percent_Identity=23.0014025245442, Blast_Score=90, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 81710; Mature: 81578
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSPTASGRNRRLLSSVALTALLWPAAGHAQSAPRGLDPIVVEGQTARPSKPRAASSAA CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC GSSRTRRASAPASRPPAAPAAAPSAAVAAVPTFNLGTMASTASRLGLTPLQTPASVDIIT CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEE AQTIAERGQRDVLDAVTQNATGITATPEPGNGGVVFSTRGFSGTGSVMTLYDGTRLYVGA HHHHHHCCHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCCCCEEEEECCCEEEEEC GTVTFPFDTWSAERIEVLRGPASVMYGEGAIGGAINVITKQPLDVQRNQAEVSLDTNLTR CEEEEECCCCCHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEE RIAVDSGGPINKDVSYRITATGNMSDGWVDRDKTSNIAVSAAVKVKQTDHLTWTLSTAYG EEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEECCC DRHPSLYYGTPLVNGRLDESLRFKNYNVGDSSIRYQDSWTQLKSEWQVTDSITVRNALYY CCCCCEEECCCCCCCCCCCCEEEECCCCCCCCEEECCHHHHHHHCEEEECCEEEEHEEEE LNSRRHWKSAEEYAFNPTTRQVDRSTYLEIFHDQQQIGDRMDATVRGHLFGLENTFVAGF ECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCHHHHCCHHCCEEEEEEEECCCCEEEEE DVNRINFKHTNNSPYGGTSSVDPYNFDPGLFASPDLTRPGYSSVTNQYAVFAENRLQLTE EECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCHHHHHH QLALIGGIRQDQPTVERTDLRNPANNYTRSYSSTTWRAGAVYTPIQDLAFYGQYSTAVDP HHHHHCCCCCCCCCCHHHHCCCCHHHHHCCCCCCCEECCEEECCHHHHHHHCCCCCCCCC VGGLVTASNANAKFELATGKQVEIGVKQSFWGGRGEWTLAGYHIVKNNLLARSSEDPDQV CCCEEEECCCCEEEEEECCCEEEEECEECCCCCCCCEEEEEEEEEECCCCCCCCCCHHHH VQVGQQSSRGIEASVGLALDHGWRVDANTTFLQAKYDDFVQSVNDVGVNFAGNVPINVPL HHHCCCCCCCCEEEEEEEECCCEEECCCCEEEEEHHHHHHHHHHHCCCEEECCCCEEEEE NVSNAWLTWAFAAGWSANAGVQVVGKRFADAANTLEMPGYTLVNAGLQWKPDAASTLSLR ECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCEECCCCCCEEEEH LYNIFDKVYATSSYVDNQWLLGRPRTAELSYNVKF HHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECC >Mature Secondary Structure SPSPTASGRNRRLLSSVALTALLWPAAGHAQSAPRGLDPIVVEGQTARPSKPRAASSAA CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC GSSRTRRASAPASRPPAAPAAAPSAAVAAVPTFNLGTMASTASRLGLTPLQTPASVDIIT CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEE AQTIAERGQRDVLDAVTQNATGITATPEPGNGGVVFSTRGFSGTGSVMTLYDGTRLYVGA HHHHHHCCHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCCCCEEEEECCCEEEEEC GTVTFPFDTWSAERIEVLRGPASVMYGEGAIGGAINVITKQPLDVQRNQAEVSLDTNLTR CEEEEECCCCCHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEE RIAVDSGGPINKDVSYRITATGNMSDGWVDRDKTSNIAVSAAVKVKQTDHLTWTLSTAYG EEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEECCC DRHPSLYYGTPLVNGRLDESLRFKNYNVGDSSIRYQDSWTQLKSEWQVTDSITVRNALYY CCCCCEEECCCCCCCCCCCCEEEECCCCCCCCEEECCHHHHHHHCEEEECCEEEEHEEEE LNSRRHWKSAEEYAFNPTTRQVDRSTYLEIFHDQQQIGDRMDATVRGHLFGLENTFVAGF ECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHCCHHHHCCHHCCEEEEEEEECCCCEEEEE DVNRINFKHTNNSPYGGTSSVDPYNFDPGLFASPDLTRPGYSSVTNQYAVFAENRLQLTE EECEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCHHHHHH QLALIGGIRQDQPTVERTDLRNPANNYTRSYSSTTWRAGAVYTPIQDLAFYGQYSTAVDP HHHHHCCCCCCCCCCHHHHCCCCHHHHHCCCCCCCEECCEEECCHHHHHHHCCCCCCCCC VGGLVTASNANAKFELATGKQVEIGVKQSFWGGRGEWTLAGYHIVKNNLLARSSEDPDQV CCCEEEECCCCEEEEEECCCEEEEECEECCCCCCCCEEEEEEEEEECCCCCCCCCCHHHH VQVGQQSSRGIEASVGLALDHGWRVDANTTFLQAKYDDFVQSVNDVGVNFAGNVPINVPL HHHCCCCCCCCEEEEEEEECCCEEECCCCEEEEEHHHHHHHHHHHCCCEEECCCCEEEEE NVSNAWLTWAFAAGWSANAGVQVVGKRFADAANTLEMPGYTLVNAGLQWKPDAASTLSLR ECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCEECCCCCCEEEEH LYNIFDKVYATSSYVDNQWLLGRPRTAELSYNVKF HHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]