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The map label for this gene is 86747228

Identifier: 86747228

GI number: 86747228

Start: 108459

End: 109907

Strand: Reverse

Name: 86747228

Synonym: RPB_0101

Alternate gene names: NA

Gene position: 109907-108459 (Counterclockwise)

Preceding gene: 86747229

Following gene: 86747226

Centisome position: 2.06

GC content: 68.53

Gene sequence:

>1449_bases
ATGCGCCGCATCACCAGGCGGCTGAAGCGGTGGCTGTATCTCGGCCACCGCTGGCTCGGGATCGCGTGCTGTCTGTTGTT
CGCGATCTGGTTCATCTCCGGCGTGGTGATGATGTATGTGGCGTTCCCGCAATTCGACGCTAAGGAGCGCCGGGCAGCGC
TGCCGGATCTCGCCTTCAGCGAAATCCGGCTCGCCCCCGATCAGGCGATGGCGGCGGCCGGGCTGACGACCTATCCGCGT
GAACTCCGTCTTGCGATGCAGGACGGCGAGCCGGTGTACCGACTCGCCGGCACGAACAGACGGCGGCAGGCGATCTCCGC
CGTCGACGGCCGGGCGCTCGGCGACATATCGCCCGAACAGGCGCTGGCGGTGGCGCGGCATCATCCCGCCGCTGTGGCGC
CGGCGCTGCTCGACATCGTCGATCGCGACCAATGGAGCGTCACCGCGCGGTTCGATCCGTTGCGGCCGCTGTTTCTGATC
GGGCTCGGCGACGATGCCGGCACCGAGCTTTACGTCTCGCAGAAGACCGGCGAGATCGTGCTCGACACCAATCGTCACGA
GCGGGTCTGGAACTGGCTCGGCGCGATTCCGCACTGGATCTATCTCACCTTGCTGCGCCAGGACGCGCCGCTGTGGCGAC
AGGTGGTGATGTGGACCTCTGGGATCTGTTTGCTGGTCGCGATCAGCGGGATCTGGATCGGGCTGCTGCGCGCCGGATTG
CGGCGGCGCTATGCGTCGGGCCGGATCACGCCCTATCGCGGCTGGATGGCGTGGCATCACCTCACCGGCCTCGTCGCCGG
CGTACTGGTGCTGACCTGGATGGCCTCGGGCTGGCTGTCGGTCAATCCGTTTGAGCTGTTCGCGCGCCGCGGCGACAGTC
GCGAGGCGCTGCAGCGCTATGCCGGCCACGACGCGCCGACGATCGCGTCCACACTCCCCGCACGCGACCGGCCCGGCGTC
GTCGAAGCGCGCTTCATCTGGGTCGGCGGCGCGCCGCTGATGCTGCTGGCGCATCGCGACGGATCGCAGAGCGTGGCCGA
TCCGGCGAGCGGCGCATCGCGGACGCTGTCACCGGAGCGGATCTTCGACGCGGCGGCGCGGCTGCTCCCTGACGCCACGA
TGACGCTGCGGCAGCGGCTGGAGGAGCCCGACGCCTATTGGTACTCGCATCATCATCAGCGCGTGCTGCCGGTGCTGCGC
GCCGGCTTCGACGATGCCGCCGCTACCTGGTATCATCTCGACCCGTCGACCGGCGAAATTCTCGGGCGCAGCGATCGCAG
CCGCCGGGTCTATCGCTGGCTGTTCAACGCGCTGCACAGCTTCGATTTCCCGGTGCTGATCGCGCACCGGCCGGCGTGGG
ACATCGTGGTGATTGTATTGTCGCTGGCGGGGCTGGTGATTTCGGTCAGCGGCATCCTGCTCGGCTGGCGGCGGCTGCGC
CGCGCGTGA

Upstream 100 bases:

>100_bases
TCTTCGACAAGGTCTATGCGACGTCGAGCTATGTCGACAACCAATGGCTGCTGGGGCGGCCCCGCACCGCGGAGCTGTCT
TACAACGTCAAGTTCTGACG

Downstream 100 bases:

>100_bases
TCACGGCGGGGCTCACACCACCTGCGGCCGCGCCGGGCGGATCGGTGGCGCCGGCGGGATCGCCGCCAGCAGCATCTTGC
GATCGACCACGGCGTTGTGG

Product: PepSY-associated TM helix

Products: NA

Alternate protein names: PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix; Na+/Proline Symporter; PepSY-Associated TM Helix Family; Transmembrane Protein; Pepsy-Associated Tm Helix Domain Protein

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MRRITRRLKRWLYLGHRWLGIACCLLFAIWFISGVVMMYVAFPQFDAKERRAALPDLAFSEIRLAPDQAMAAAGLTTYPR
ELRLAMQDGEPVYRLAGTNRRRQAISAVDGRALGDISPEQALAVARHHPAAVAPALLDIVDRDQWSVTARFDPLRPLFLI
GLGDDAGTELYVSQKTGEIVLDTNRHERVWNWLGAIPHWIYLTLLRQDAPLWRQVVMWTSGICLLVAISGIWIGLLRAGL
RRRYASGRITPYRGWMAWHHLTGLVAGVLVLTWMASGWLSVNPFELFARRGDSREALQRYAGHDAPTIASTLPARDRPGV
VEARFIWVGGAPLMLLAHRDGSQSVADPASGASRTLSPERIFDAAARLLPDATMTLRQRLEEPDAYWYSHHHQRVLPVLR
AGFDDAAATWYHLDPSTGEILGRSDRSRRVYRWLFNALHSFDFPVLIAHRPAWDIVVIVLSLAGLVISVSGILLGWRRLR
RA

Sequences:

>Translated_482_residues
MRRITRRLKRWLYLGHRWLGIACCLLFAIWFISGVVMMYVAFPQFDAKERRAALPDLAFSEIRLAPDQAMAAAGLTTYPR
ELRLAMQDGEPVYRLAGTNRRRQAISAVDGRALGDISPEQALAVARHHPAAVAPALLDIVDRDQWSVTARFDPLRPLFLI
GLGDDAGTELYVSQKTGEIVLDTNRHERVWNWLGAIPHWIYLTLLRQDAPLWRQVVMWTSGICLLVAISGIWIGLLRAGL
RRRYASGRITPYRGWMAWHHLTGLVAGVLVLTWMASGWLSVNPFELFARRGDSREALQRYAGHDAPTIASTLPARDRPGV
VEARFIWVGGAPLMLLAHRDGSQSVADPASGASRTLSPERIFDAAARLLPDATMTLRQRLEEPDAYWYSHHHQRVLPVLR
AGFDDAAATWYHLDPSTGEILGRSDRSRRVYRWLFNALHSFDFPVLIAHRPAWDIVVIVLSLAGLVISVSGILLGWRRLR
RA
>Mature_482_residues
MRRITRRLKRWLYLGHRWLGIACCLLFAIWFISGVVMMYVAFPQFDAKERRAALPDLAFSEIRLAPDQAMAAAGLTTYPR
ELRLAMQDGEPVYRLAGTNRRRQAISAVDGRALGDISPEQALAVARHHPAAVAPALLDIVDRDQWSVTARFDPLRPLFLI
GLGDDAGTELYVSQKTGEIVLDTNRHERVWNWLGAIPHWIYLTLLRQDAPLWRQVVMWTSGICLLVAISGIWIGLLRAGL
RRRYASGRITPYRGWMAWHHLTGLVAGVLVLTWMASGWLSVNPFELFARRGDSREALQRYAGHDAPTIASTLPARDRPGV
VEARFIWVGGAPLMLLAHRDGSQSVADPASGASRTLSPERIFDAAARLLPDATMTLRQRLEEPDAYWYSHHHQRVLPVLR
AGFDDAAATWYHLDPSTGEILGRSDRSRRVYRWLFNALHSFDFPVLIAHRPAWDIVVIVLSLAGLVISVSGILLGWRRLR
RA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54324; Mature: 54324

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRITRRLKRWLYLGHRWLGIACCLLFAIWFISGVVMMYVAFPQFDAKERRAALPDLAFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHH
EIRLAPDQAMAAAGLTTYPRELRLAMQDGEPVYRLAGTNRRRQAISAVDGRALGDISPEQ
HHCCCCHHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCHHH
ALAVARHHPAAVAPALLDIVDRDQWSVTARFDPLRPLFLIGLGDDAGTELYVSQKTGEIV
HHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCEE
LDTNRHERVWNWLGAIPHWIYLTLLRQDAPLWRQVVMWTSGICLLVAISGIWIGLLRAGL
EECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RRRYASGRITPYRGWMAWHHLTGLVAGVLVLTWMASGWLSVNPFELFARRGDSREALQRY
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHH
AGHDAPTIASTLPARDRPGVVEARFIWVGGAPLMLLAHRDGSQSVADPASGASRTLSPER
HCCCCCHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCHHH
IFDAAARLLPDATMTLRQRLEEPDAYWYSHHHQRVLPVLRAGFDDAAATWYHLDPSTGEI
HHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHCEEEEECCCCCHH
LGRSDRSRRVYRWLFNALHSFDFPVLIAHRPAWDIVVIVLSLAGLVISVSGILLGWRRLR
CCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RA
CC
>Mature Secondary Structure
MRRITRRLKRWLYLGHRWLGIACCLLFAIWFISGVVMMYVAFPQFDAKERRAALPDLAFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHH
EIRLAPDQAMAAAGLTTYPRELRLAMQDGEPVYRLAGTNRRRQAISAVDGRALGDISPEQ
HHCCCCHHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCHHH
ALAVARHHPAAVAPALLDIVDRDQWSVTARFDPLRPLFLIGLGDDAGTELYVSQKTGEIV
HHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCEE
LDTNRHERVWNWLGAIPHWIYLTLLRQDAPLWRQVVMWTSGICLLVAISGIWIGLLRAGL
EECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RRRYASGRITPYRGWMAWHHLTGLVAGVLVLTWMASGWLSVNPFELFARRGDSREALQRY
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHH
AGHDAPTIASTLPARDRPGVVEARFIWVGGAPLMLLAHRDGSQSVADPASGASRTLSPER
HCCCCCHHHHHCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCHHH
IFDAAARLLPDATMTLRQRLEEPDAYWYSHHHQRVLPVLRAGFDDAAATWYHLDPSTGEI
HHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHCEEEEECCCCCHH
LGRSDRSRRVYRWLFNALHSFDFPVLIAHRPAWDIVVIVLSLAGLVISVSGILLGWRRLR
CCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA