Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
---|---|
Accession | NC_007776 |
Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is 86609168
Identifier: 86609168
GI number: 86609168
Start: 1791477
End: 1792229
Strand: Reverse
Name: 86609168
Synonym: CYB_1708
Alternate gene names: NA
Gene position: 1792229-1791477 (Counterclockwise)
Preceding gene: 86609173
Following gene: 86609167
Centisome position: 58.83
GC content: 59.36
Gene sequence:
>753_bases ATGGATACTGAACTGCTGGTTCCCGACGTTGCCGACCTTGTGACGGAGGACGATACCCCGGTGGATAATTTCGCCTCCGA AAAGCAGCAGCGCCTCTTGACAGGGGCTCTCTACAGCGCTTTGCGCGGCAAAACCTTTTTAGCAGCGGCAAATGTAGGCA TCTACACCGCCATCGGTCGGCCCCCGATTGTGCCGGATGTTTTTCTCAGCCTGGACGTCACGGTGCCGGAGCAATGGTGG GAGAAGCAAAACCGTTGCTACCTGCTCTGGCAATTTGACAAGCCGCCGGATGTGGTGATCGAGATCGTCTCCAACCGCGA AGGCGACGAGCTGGAAGGCAAGCTGAGCCGTTATGAGCAGATGCGAGTTAGCTACTACGCGGTCTTCGATCCCAATCATG AGCTGGGGCCAGAGGAGTTGCGCATTTTCGAACTGCGGGGCCGCCACTACGCGGAAATGACCGAGACCTGGCTAGAACAG GTGGGGCTGGGCCTGACGGTGTGGGAAGGCGTTTTTGAGGGGAAACAAGCTCGCTGGCTGCGCTGGTGTGATGCCCAAGG GCAGTTGCTGCTGACCGGCGATGAACGGGCTGAGTTGGAGCGGGAACGGGCGGAGCAGGAACGTCAACGGGCGGAACAAG AACGCCAAAGAGCCGAACAAGAACGCCAACGGGCGGAACAGGAACGTCAACGGGCGGAGCGTCTGGCGGCAAGATTGCGG GCTTTGGGTGAGGATCCCGATTTGGAGAGCTGA
Upstream 100 bases:
>100_bases CTGGGCTTGCTCGAGGACTCTGTTTTCTCTGTTTCTCAGGGAGCAGAGGATCCCTGAGGTGAGCAGCTAAGATCACTGGC ATCCCCACCCCCATCTGCCC
Downstream 100 bases:
>100_bases AGCCCAGGGATCCCCTTCAGCACCCACCCTCCACTACACTCAGAGAGGGAACTGCTGCCGGAGTGGCAGGGATCGTTGGA CTCACAGATGGGTTATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MDTELLVPDVADLVTEDDTPVDNFASEKQQRLLTGALYSALRGKTFLAAANVGIYTAIGRPPIVPDVFLSLDVTVPEQWW EKQNRCYLLWQFDKPPDVVIEIVSNREGDELEGKLSRYEQMRVSYYAVFDPNHELGPEELRIFELRGRHYAEMTETWLEQ VGLGLTVWEGVFEGKQARWLRWCDAQGQLLLTGDERAELERERAEQERQRAEQERQRAEQERQRAEQERQRAERLAARLR ALGEDPDLES
Sequences:
>Translated_250_residues MDTELLVPDVADLVTEDDTPVDNFASEKQQRLLTGALYSALRGKTFLAAANVGIYTAIGRPPIVPDVFLSLDVTVPEQWW EKQNRCYLLWQFDKPPDVVIEIVSNREGDELEGKLSRYEQMRVSYYAVFDPNHELGPEELRIFELRGRHYAEMTETWLEQ VGLGLTVWEGVFEGKQARWLRWCDAQGQLLLTGDERAELERERAEQERQRAEQERQRAEQERQRAEQERQRAERLAARLR ALGEDPDLES >Mature_250_residues MDTELLVPDVADLVTEDDTPVDNFASEKQQRLLTGALYSALRGKTFLAAANVGIYTAIGRPPIVPDVFLSLDVTVPEQWW EKQNRCYLLWQFDKPPDVVIEIVSNREGDELEGKLSRYEQMRVSYYAVFDPNHELGPEELRIFELRGRHYAEMTETWLEQ VGLGLTVWEGVFEGKQARWLRWCDAQGQLLLTGDERAELERERAEQERQRAEQERQRAEQERQRAEQERQRAERLAARLR ALGEDPDLES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29091; Mature: 29091
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTELLVPDVADLVTEDDTPVDNFASEKQQRLLTGALYSALRGKTFLAAANVGIYTAIGR CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCC PPIVPDVFLSLDVTVPEQWWEKQNRCYLLWQFDKPPDVVIEIVSNREGDELEGKLSRYEQ CCCCCHHHEEEECCCCHHHHCCCCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHH MRVSYYAVFDPNHELGPEELRIFELRGRHYAEMTETWLEQVGLGLTVWEGVFEGKQARWL HHEEEEEEECCCCCCCHHHEEEEHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHH RWCDAQGQLLLTGDERAELERERAEQERQRAEQERQRAEQERQRAEQERQRAERLAARLR HEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGEDPDLES HCCCCCCCCC >Mature Secondary Structure MDTELLVPDVADLVTEDDTPVDNFASEKQQRLLTGALYSALRGKTFLAAANVGIYTAIGR CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCC PPIVPDVFLSLDVTVPEQWWEKQNRCYLLWQFDKPPDVVIEIVSNREGDELEGKLSRYEQ CCCCCHHHEEEECCCCHHHHCCCCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHH MRVSYYAVFDPNHELGPEELRIFELRGRHYAEMTETWLEQVGLGLTVWEGVFEGKQARWL HHEEEEEEECCCCCCCHHHEEEEHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHH RWCDAQGQLLLTGDERAELERERAEQERQRAEQERQRAEQERQRAEQERQRAERLAARLR HEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGEDPDLES HCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA