Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
---|---|
Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is plsC [H]
Identifier: 86609167
GI number: 86609167
Start: 1790757
End: 1791389
Strand: Reverse
Name: plsC [H]
Synonym: CYB_1706
Alternate gene names: 86609167
Gene position: 1791389-1790757 (Counterclockwise)
Preceding gene: 86609168
Following gene: 86609165
Centisome position: 58.8
GC content: 63.19
Gene sequence:
>633_bases ATGGGTTATCGCCGCCGGGATTGGTTGGCCTACTGGCTGCTCAAGTGGCTGGTGGTCAACCCCTTGTTTCGGGGACTGTA TTTTGGGCGCACCTATGGGCAGGAAAACGTGCCTCGCCAGGGATCCCTCATCGTCGTCAGCAACCACGCCAGCCATTTGG ATCCGCCGCTGGTGGCCAATGCGGTGCGCCGCCCGGTGGCCTTCATGGCCAAGGAAGAGCTGTTTCGGGTGCCGGGGCTG AAGCAGGTGATCCAGCTCTACGGCGCCTACCCGGTCAAAAGAGGCGGCTCTGACCGCGCTGCCCTGCGGGCCACGGAAGC AGCTTTGGCGCAGGGATGGGCGGTAGGGATCTTTTTGAATGGCACTCGTACCCCCGATGGCCGCATTCCTCAGCCCCACT TGGGAGCGGCCTTGGTTGCAGCCCGCACCCAAACGCCTCTGCTGCCTGTAGCCCTTTGGGGCACGGAAAAGGTCTTGCCC AAGGGATCCCGGTGGCCGCGTTTGTTCTGCCCCATCACGGTGCGCATTGGCAACCTGATTCTCCCCCCCGCTTCCAGCGA TAAGGCCGATTTGCAGCGGGTGACGGCAGAGTGCGTGCAGGCTATCCATGCCCTTTTGGATCAGGGGCGCTGA
Upstream 100 bases:
>100_bases TTTGGAGAGCTGAAGCCCAGGGATCCCCTTCAGCACCCACCCTCCACTACACTCAGAGAGGGAACTGCTGCCGGAGTGGC AGGGATCGTTGGACTCACAG
Downstream 100 bases:
>100_bases GGGTATCTTGGGCTACCAGATACTCAACAACAGGGATCCCTCCCAAGATGTGCTTTTGAAGAATCTCCTCCACCACCTCC GGCGTGACCGAGTGGTACCA
Product: 1-acyl-sn-glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MGYRRRDWLAYWLLKWLVVNPLFRGLYFGRTYGQENVPRQGSLIVVSNHASHLDPPLVANAVRRPVAFMAKEELFRVPGL KQVIQLYGAYPVKRGGSDRAALRATEAALAQGWAVGIFLNGTRTPDGRIPQPHLGAALVAARTQTPLLPVALWGTEKVLP KGSRWPRLFCPITVRIGNLILPPASSDKADLQRVTAECVQAIHALLDQGR
Sequences:
>Translated_210_residues MGYRRRDWLAYWLLKWLVVNPLFRGLYFGRTYGQENVPRQGSLIVVSNHASHLDPPLVANAVRRPVAFMAKEELFRVPGL KQVIQLYGAYPVKRGGSDRAALRATEAALAQGWAVGIFLNGTRTPDGRIPQPHLGAALVAARTQTPLLPVALWGTEKVLP KGSRWPRLFCPITVRIGNLILPPASSDKADLQRVTAECVQAIHALLDQGR >Mature_209_residues GYRRRDWLAYWLLKWLVVNPLFRGLYFGRTYGQENVPRQGSLIVVSNHASHLDPPLVANAVRRPVAFMAKEELFRVPGLK QVIQLYGAYPVKRGGSDRAALRATEAALAQGWAVGIFLNGTRTPDGRIPQPHLGAALVAARTQTPLLPVALWGTEKVLPK GSRWPRLFCPITVRIGNLILPPASSDKADLQRVTAECVQAIHALLDQGR
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 23230; Mature: 23099
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYRRRDWLAYWLLKWLVVNPLFRGLYFGRTYGQENVPRQGSLIVVSNHASHLDPPLVAN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHH AVRRPVAFMAKEELFRVPGLKQVIQLYGAYPVKRGGSDRAALRATEAALAQGWAVGIFLN HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEE GTRTPDGRIPQPHLGAALVAARTQTPLLPVALWGTEKVLPKGSRWPRLFCPITVRIGNLI CCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEECCEE LPPASSDKADLQRVTAECVQAIHALLDQGR ECCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GYRRRDWLAYWLLKWLVVNPLFRGLYFGRTYGQENVPRQGSLIVVSNHASHLDPPLVAN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHH AVRRPVAFMAKEELFRVPGLKQVIQLYGAYPVKRGGSDRAALRATEAALAQGWAVGIFLN HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEE GTRTPDGRIPQPHLGAALVAARTQTPLLPVALWGTEKVLPKGSRWPRLFCPITVRIGNLI CCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEECCEE LPPASSDKADLQRVTAECVQAIHALLDQGR ECCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685; 7812434 [H]