Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86609173
Identifier: 86609173
GI number: 86609173
Start: 1796274
End: 1796669
Strand: Reverse
Name: 86609173
Synonym: CYB_1713
Alternate gene names: NA
Gene position: 1796669-1796274 (Counterclockwise)
Preceding gene: 86609175
Following gene: 86609168
Centisome position: 58.97
GC content: 57.83
Gene sequence:
>396_bases ATGTCCCCTTCCTCCAAGCCCCTGAGCGAGCAGATTCGCAGCATTGACGACCATCTCTCCCGCCGCCCCCTGGATCTGGA TCCGGCGGGCTATTTCGTCATCTACTTGGATCGGGAGCAGAACCTCATTTGCGCCAAGTACTACAGCACCGTCATCAATG AGCGGGGGCTGGCCACCGATCCGGAAACAGGAGCTGTGATCCCGGCAAAGGGCTCCGTCAACCGATCCCCTGAACGGGTG TACGTTGGGCGCACGGCCAAAGAACTGTGTGTGCAGATCTTTGAAAAAGAGCAGGAGAAAGTGGTCTCCCAGCTCAGCCA TGCGGCCTACTTGGGCAGGGAGTTTCAAAAAGCTGAAGCTGCCCTGATCTCCGGCGAGGAGTACATCCAAGACTGA
Upstream 100 bases:
>100_bases CCCAAAGGCTGCCCAAAGATTGGGTTCATCTGCCACAATGAGAGCAGCCAAAAGTAGTCCCGGCTACGTTTCTCCTGTGT GGTTCTGGGTCAGCCGTTCT
Downstream 100 bases:
>100_bases TCCCTTCCCAGAAAGCTCACTTTCGCAAGACTACATCATCCCCTTAGGTGCAGAGCCAGCCGCCGGCTTGGGCTCAGGCT TTTCCACCACAATCGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSPSSKPLSEQIRSIDDHLSRRPLDLDPAGYFVIYLDREQNLICAKYYSTVINERGLATDPETGAVIPAKGSVNRSPERV YVGRTAKELCVQIFEKEQEKVVSQLSHAAYLGREFQKAEAALISGEEYIQD
Sequences:
>Translated_131_residues MSPSSKPLSEQIRSIDDHLSRRPLDLDPAGYFVIYLDREQNLICAKYYSTVINERGLATDPETGAVIPAKGSVNRSPERV YVGRTAKELCVQIFEKEQEKVVSQLSHAAYLGREFQKAEAALISGEEYIQD >Mature_130_residues SPSSKPLSEQIRSIDDHLSRRPLDLDPAGYFVIYLDREQNLICAKYYSTVINERGLATDPETGAVIPAKGSVNRSPERVY VGRTAKELCVQIFEKEQEKVVSQLSHAAYLGREFQKAEAALISGEEYIQD
Specific function: Unknown
COG id: COG0294
COG function: function code H; Dihydropteroate synthase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ycf91 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017260 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14706; Mature: 14575
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSSKPLSEQIRSIDDHLSRRPLDLDPAGYFVIYLDREQNLICAKYYSTVINERGLATD CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCC PETGAVIPAKGSVNRSPERVYVGRTAKELCVQIFEKEQEKVVSQLSHAAYLGREFQKAEA CCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALISGEEYIQD HHHCCHHHHCC >Mature Secondary Structure SPSSKPLSEQIRSIDDHLSRRPLDLDPAGYFVIYLDREQNLICAKYYSTVINERGLATD CCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCC PETGAVIPAKGSVNRSPERVYVGRTAKELCVQIFEKEQEKVVSQLSHAAYLGREFQKAEA CCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALISGEEYIQD HHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]