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The map label for this gene is prc-2 [H]

Identifier: 86609090

GI number: 86609090

Start: 1698660

End: 1699937

Strand: Reverse

Name: prc-2 [H]

Synonym: CYB_1628

Alternate gene names: 86609090

Gene position: 1699937-1698660 (Counterclockwise)

Preceding gene: 86609094

Following gene: 86609088

Centisome position: 55.8

GC content: 62.36

Gene sequence:

>1278_bases
ATGGTTGTGCAGAAGCCGAGATACACAGGGATCCGCTGGAGAGGGTGGGGGATCCGCATTGTCTTGCTTGGGTGTTTGCT
CTGGGCGAGTTTGGGCATTGGCGCCTGTCCAGGGCAGGCCAGCCGCTGGGGAGAAGAGCAGCAACTGCTGGCGCAGGCTT
GGGCCTATGTGGATCGGGCCTATGTGGATCCGGGGTTTAACGGGCAAAACTGGTGGCAGGTGCGGCAACGGTTTCTCTCC
CGGCCCCTGAAGGAGCGCAAGCAGACTTACCAGGCCATCGAGGAGATGTTGGCCACTCTGGGGGATCCCTTTACCCGCTT
TCTGGACAGAGAGCACTACCTCAGCCTGCAGACCTCTACAGCCGGCGAGCTGAGTGGTGTCGGCTTGCAGATTGCTATCG
ACGAGCAAGGCGCTGTGCGGGTGATTGCCCCCATGGAGGGCACTCCTGCCGAGCAGGCCGGGATCCAACCTCAGGATGAG
ATTTTGGCGGTGGATCGGGTGCCGGTGGCGGGGTTGAGTCTGGACGAAGTGGCCGAGCGGATGCGGGGGCGCAGTGGCAC
GCCGGTTACCTTGAAGCTGAAGCGGCAGGATCGCATTTGGGAGGTGGAGCTGGTACGCCAATCGATCACCATCAACCCCG
TGCGCACCCGTTTTTTTGAGCTGCCTCAGGGATCGGTGGCCTACATTCGCCTCAGCCAGTTCAACGGCAATGCTGCCGCT
CAAGTCCGCCAAGCCATTCGGGCCGCAGAAGCTCAAGGGGTGCGGGGCTACATTCTCGATTTGCGCAACAATCCGGGGGG
ACTCTTGCAGGCGGCTATCGAGATCGCTCGCTTCTGGATCCCCAAGGGTGACATTGTGCTGGTGACGGATCGCCACGGCA
TTCAAGACAGCATTCCCGCCACCGGCGAGGTGCTCACAGAGGCGCCGCTGGTGGTCTTGGTAAATCAGGGCAGCGCCAGT
GCCAGTGAAGTGTTGGCCGGGGCACTTCAGGATAGTGGGCGAGCTCAACTGGTGGGAACGCGCACCTTTGGCAAGGGTCT
GATTCAATCCCTGCTGGAGCTGGCGGATGGATCGGGGCTGGCGGTGACCACGGCCAAGTACCTCACCCCCAGCGGCCACG
ACATTCATCGCCAGGGGATCCAGCCCGATGTGGTGGTGGCGGAGGGATCCGTTCCTCTGACGGCAGAAACCTTGGCCGGG
CCGGAGGACATCCAGCTGCAGCGAGCCTTGGAGTTGTTGGGGCAGACCCAAGGGATCCCGGTGGCCAAAAGCGGGTGA

Upstream 100 bases:

>100_bases
GCGTCGGGCTCAGCTTGGGGACGAAGATCTCGATCCCAGGAGGCCAGGCAAGTTTTCGATATTGCGTTTTGTTCATGTTT
CTTAATGTTTTTTGGGATCG

Downstream 100 bases:

>100_bases
GGGAGGAGATCCCGCTCCAGACCCAGATCTCAATCGTTGGCATTAGGATTTGGATTCCTGTTTGTTTTCAATTCGTTTTA
GGATCAGAGGCAGGGTTTTC

Product: C-terminal processing peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MVVQKPRYTGIRWRGWGIRIVLLGCLLWASLGIGACPGQASRWGEEQQLLAQAWAYVDRAYVDPGFNGQNWWQVRQRFLS
RPLKERKQTYQAIEEMLATLGDPFTRFLDREHYLSLQTSTAGELSGVGLQIAIDEQGAVRVIAPMEGTPAEQAGIQPQDE
ILAVDRVPVAGLSLDEVAERMRGRSGTPVTLKLKRQDRIWEVELVRQSITINPVRTRFFELPQGSVAYIRLSQFNGNAAA
QVRQAIRAAEAQGVRGYILDLRNNPGGLLQAAIEIARFWIPKGDIVLVTDRHGIQDSIPATGEVLTEAPLVVLVNQGSAS
ASEVLAGALQDSGRAQLVGTRTFGKGLIQSLLELADGSGLAVTTAKYLTPSGHDIHRQGIQPDVVVAEGSVPLTAETLAG
PEDIQLQRALELLGQTQGIPVAKSG

Sequences:

>Translated_425_residues
MVVQKPRYTGIRWRGWGIRIVLLGCLLWASLGIGACPGQASRWGEEQQLLAQAWAYVDRAYVDPGFNGQNWWQVRQRFLS
RPLKERKQTYQAIEEMLATLGDPFTRFLDREHYLSLQTSTAGELSGVGLQIAIDEQGAVRVIAPMEGTPAEQAGIQPQDE
ILAVDRVPVAGLSLDEVAERMRGRSGTPVTLKLKRQDRIWEVELVRQSITINPVRTRFFELPQGSVAYIRLSQFNGNAAA
QVRQAIRAAEAQGVRGYILDLRNNPGGLLQAAIEIARFWIPKGDIVLVTDRHGIQDSIPATGEVLTEAPLVVLVNQGSAS
ASEVLAGALQDSGRAQLVGTRTFGKGLIQSLLELADGSGLAVTTAKYLTPSGHDIHRQGIQPDVVVAEGSVPLTAETLAG
PEDIQLQRALELLGQTQGIPVAKSG
>Mature_425_residues
MVVQKPRYTGIRWRGWGIRIVLLGCLLWASLGIGACPGQASRWGEEQQLLAQAWAYVDRAYVDPGFNGQNWWQVRQRFLS
RPLKERKQTYQAIEEMLATLGDPFTRFLDREHYLSLQTSTAGELSGVGLQIAIDEQGAVRVIAPMEGTPAEQAGIQPQDE
ILAVDRVPVAGLSLDEVAERMRGRSGTPVTLKLKRQDRIWEVELVRQSITINPVRTRFFELPQGSVAYIRLSQFNGNAAA
QVRQAIRAAEAQGVRGYILDLRNNPGGLLQAAIEIARFWIPKGDIVLVTDRHGIQDSIPATGEVLTEAPLVVLVNQGSAS
ASEVLAGALQDSGRAQLVGTRTFGKGLIQSLLELADGSGLAVTTAKYLTPSGHDIHRQGIQPDVVVAEGSVPLTAETLAG
PEDIQLQRALELLGQTQGIPVAKSG

Specific function: Cleavage of the 16 C-terminal residues from the D1 precursor of photosystem II. May be involved in protection of the bacterium from thermal and osmotic stresses [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=313, Percent_Identity=30.6709265175719, Blast_Score=119, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 46212; Mature: 46212

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVQKPRYTGIRWRGWGIRIVLLGCLLWASLGIGACPGQASRWGEEQQLLAQAWAYVDRA
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHH
YVDPGFNGQNWWQVRQRFLSRPLKERKQTYQAIEEMLATLGDPFTRFLDREHYLSLQTST
HCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHEEEEECCC
AGELSGVGLQIAIDEQGAVRVIAPMEGTPAEQAGIQPQDEILAVDRVPVAGLSLDEVAER
CCCCCCCEEEEEECCCCCEEEEECCCCCCHHHCCCCCHHHEEEECCCCCCCCCHHHHHHH
MRGRSGTPVTLKLKRQDRIWEVELVRQSITINPVRTRFFELPQGSVAYIRLSQFNGNAAA
HCCCCCCCEEEEEECCCCCEEHEEHHHHCCCCHHHHHHEECCCCCEEEEEEEECCCCHHH
QVRQAIRAAEAQGVRGYILDLRNNPGGLLQAAIEIARFWIPKGDIVLVTDRHGIQDSIPA
HHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
TGEVLTEAPLVVLVNQGSASASEVLAGALQDSGRAQLVGTRTFGKGLIQSLLELADGSGL
CCHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCE
AVTTAKYLTPSGHDIHRQGIQPDVVVAEGSVPLTAETLAGPEDIQLQRALELLGQTQGIP
EEEEEEHCCCCCCCHHHCCCCCCEEEECCCCCEEHHHHCCCHHHHHHHHHHHHCCCCCCC
VAKSG
CCCCC
>Mature Secondary Structure
MVVQKPRYTGIRWRGWGIRIVLLGCLLWASLGIGACPGQASRWGEEQQLLAQAWAYVDRA
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHH
YVDPGFNGQNWWQVRQRFLSRPLKERKQTYQAIEEMLATLGDPFTRFLDREHYLSLQTST
HCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHEEEEECCC
AGELSGVGLQIAIDEQGAVRVIAPMEGTPAEQAGIQPQDEILAVDRVPVAGLSLDEVAER
CCCCCCCEEEEEECCCCCEEEEECCCCCCHHHCCCCCHHHEEEECCCCCCCCCHHHHHHH
MRGRSGTPVTLKLKRQDRIWEVELVRQSITINPVRTRFFELPQGSVAYIRLSQFNGNAAA
HCCCCCCCEEEEEECCCCCEEHEEHHHHCCCCHHHHHHEECCCCCEEEEEEEECCCCHHH
QVRQAIRAAEAQGVRGYILDLRNNPGGLLQAAIEIARFWIPKGDIVLVTDRHGIQDSIPA
HHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
TGEVLTEAPLVVLVNQGSASASEVLAGALQDSGRAQLVGTRTFGKGLIQSLLELADGSGL
CCHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCE
AVTTAKYLTPSGHDIHRQGIQPDVVVAEGSVPLTAETLAGPEDIQLQRALELLGQTQGIP
EEEEEEHCCCCCCCHHHCCCCCCEEEECCCCCEEHHHHCCCHHHHHHHHHHHHCCCCCCC
VAKSG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8034700; 8058761; 8590279; 8905231 [H]