| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608444
Identifier: 86608444
GI number: 86608444
Start: 1001414
End: 1002196
Strand: Reverse
Name: 86608444
Synonym: CYB_0965
Alternate gene names: NA
Gene position: 1002196-1001414 (Counterclockwise)
Preceding gene: 86608445
Following gene: 86608441
Centisome position: 32.89
GC content: 60.92
Gene sequence:
>783_bases TTGAGGGAGCCTTCGCCTACAGCCAAACCCGACCCACCCTTACAGCAGGCTGCCTCTGCCGACAAGCAAGAGGCTGTGGA TTGGCAATTTGCTTTTGAACGCTCTGAGGTGATGCGGGCCTTTCAACAAGAGTTGCTCGTCAGCATCGGCCATGAGCTGC GCAATCCCCTCAGCAGCCAGATGGGATCCCTGCAGTTGGTGCTGTCAGATCTGTGTGATTCCCCCGAAGAGGAGCGGGAA TACCTTCAAAGTGCCAAAGAGGCGGTAGAGCGCCTGATCAAGCTGCTTGAGGAATACACCCGCCTGGCTCGCCATGACCT GCCCATCCAACCTCTGCGACCGGAACCGACCCGACTACGCCCCCTCCTGCAGGATGTGTACAGCCTAACTCGCCTACAGG CCCAGGATCAGGGCATTCGCTACGAATGGCCGGTTCTACAACCAGCCCCAGCCTCTGAGGTGCCCCTTCTCCCCGACAGC CTCACCGTTTGGGCGGATCCCCACGGCTTGGTGCAGGCGCTGCTGGGAGTGTGTCGCTGGGGCATCCGCACCCTACGCTA CGGTTCGATGGCTTTGCACCCCTATCCCACCGCAGAAGAAGAGGGGCGACTGTGCCTGGGGTGGAACCTTGAGGGGCGAT GCCATGTGCCCATTCAAACAGAGGGCTGTGCTGTCTGGCGGGTAAGCGAGCGGCTCCTGAGAGAAATGGGAGGCCAGCTG GAACTCTGCGAAAGCGGCCCCTACCGAGTTGGCATCAAGGTGACCCTGCGCCTCGCCCATTGA
Upstream 100 bases:
>100_bases GATGGGGTATCGCCGGAGCCGGAACTGTCCAAAACTTAAAGCTCCGAGCCCAGAGATCTGAGCACGGATGGGATCCCCTG TCCTTCGCCAGGAGCACTTC
Downstream 100 bases:
>100_bases ACCCCAGGCCAGAGGGACTTGGGCCTATCGGCTTCTCAAAGCTGGCCAGTTGGCATCTGCCCTCTTGATCAAGCCGGGGA TGTCGCGCTCCCAGTTACGC
Product: sensor histidine kinase
Products: NA
Alternate protein names: Sensor Histidine Kinase; Two-Component Sensor Histidine Kinase; Sensor Protein; Histidine Kinase A Domain Protein; Histidine Kinase HepN
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MREPSPTAKPDPPLQQAASADKQEAVDWQFAFERSEVMRAFQQELLVSIGHELRNPLSSQMGSLQLVLSDLCDSPEEERE YLQSAKEAVERLIKLLEEYTRLARHDLPIQPLRPEPTRLRPLLQDVYSLTRLQAQDQGIRYEWPVLQPAPASEVPLLPDS LTVWADPHGLVQALLGVCRWGIRTLRYGSMALHPYPTAEEEGRLCLGWNLEGRCHVPIQTEGCAVWRVSERLLREMGGQL ELCESGPYRVGIKVTLRLAH
Sequences:
>Translated_260_residues MREPSPTAKPDPPLQQAASADKQEAVDWQFAFERSEVMRAFQQELLVSIGHELRNPLSSQMGSLQLVLSDLCDSPEEERE YLQSAKEAVERLIKLLEEYTRLARHDLPIQPLRPEPTRLRPLLQDVYSLTRLQAQDQGIRYEWPVLQPAPASEVPLLPDS LTVWADPHGLVQALLGVCRWGIRTLRYGSMALHPYPTAEEEGRLCLGWNLEGRCHVPIQTEGCAVWRVSERLLREMGGQL ELCESGPYRVGIKVTLRLAH >Mature_260_residues MREPSPTAKPDPPLQQAASADKQEAVDWQFAFERSEVMRAFQQELLVSIGHELRNPLSSQMGSLQLVLSDLCDSPEEERE YLQSAKEAVERLIKLLEEYTRLARHDLPIQPLRPEPTRLRPLLQDVYSLTRLQAQDQGIRYEWPVLQPAPASEVPLLPDS LTVWADPHGLVQALLGVCRWGIRTLRYGSMALHPYPTAEEEGRLCLGWNLEGRCHVPIQTEGCAVWRVSERLLREMGGQL ELCESGPYRVGIKVTLRLAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29530; Mature: 29530
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREPSPTAKPDPPLQQAASADKQEAVDWQFAFERSEVMRAFQQELLVSIGHELRNPLSSQ CCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGSLQLVLSDLCDSPEEEREYLQSAKEAVERLIKLLEEYTRLARHDLPIQPLRPEPTRLR HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH PLLQDVYSLTRLQAQDQGIRYEWPVLQPAPASEVPLLPDSLTVWADPHGLVQALLGVCRW HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHH GIRTLRYGSMALHPYPTAEEEGRLCLGWNLEGRCHVPIQTEGCAVWRVSERLLREMGGQL HHHHHHCCCEEECCCCCCCCCCCEEEEECCCCEEEECEECCCCHHHHHHHHHHHHHCCCE ELCESGPYRVGIKVTLRLAH EEECCCCEEEEEEEEEEECC >Mature Secondary Structure MREPSPTAKPDPPLQQAASADKQEAVDWQFAFERSEVMRAFQQELLVSIGHELRNPLSSQ CCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGSLQLVLSDLCDSPEEEREYLQSAKEAVERLIKLLEEYTRLARHDLPIQPLRPEPTRLR HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH PLLQDVYSLTRLQAQDQGIRYEWPVLQPAPASEVPLLPDSLTVWADPHGLVQALLGVCRW HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHH GIRTLRYGSMALHPYPTAEEEGRLCLGWNLEGRCHVPIQTEGCAVWRVSERLLREMGGQL HHHHHHCCCEEECCCCCCCCCCCEEEEECCCCEEEECEECCCCHHHHHHHHHHHHHCCCE ELCESGPYRVGIKVTLRLAH EEECCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA