Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86608441

Identifier: 86608441

GI number: 86608441

Start: 999485

End: 1000225

Strand: Reverse

Name: 86608441

Synonym: CYB_0962

Alternate gene names: NA

Gene position: 1000225-999485 (Counterclockwise)

Preceding gene: 86608444

Following gene: 86608440

Centisome position: 32.83

GC content: 56.41

Gene sequence:

>741_bases
ATGCTGTTCACCCCCTTCAGCGACTTTCTGCAGAAGCTGGGCCAGTACGGATCCCATTGGACAGTGCTGGCCCTAATCTT
GGGATTTGCCTGTGCTCACAGCGGACTGGCCTACTTGCGACCCTGGGGGGAAAGCCGGCTGGGATCCCGTCTGTACCGCA
TCTTCTTTGCTCTGGTGAGCCTCAGTTTGGCACCGCTGTTGCTCATCTATTTTTTCAACCACCGCTACGACGGGGTGATT
CTCTGGGATCTCCAAGCCGTCCCGGGCATTCGCACCACCGTTGCTCTTTTGTCTGCCCTCTCTTTTTTCTTTTTGTATCC
GGCCACCTTCAACTTGCTGGAGATCGCCGCCATTCGCAAGCCGGAGATCCACCTGTTTGAAACCGGGATCATCCGTATCA
CCCGTCATCCCCAAATGGTGGGCCAGGTGATCTGGTGTGTAGCCCATACCCTTTGGATTGGCTCCAGCTTTATGGTGGTG
ACCTCGCTTGGGCTCATTGCCTACCACCTGTTTGCGGTTTGGCACGGGGATCACCGCCTGGAGCGGAAATACGGGCAGGC
CTTCCGCGATCTCAAGGCGCGCACCTCCGTGATCCCCGGCTTGGCCATTCTGCAGAAGCGACAGCAACTGCGCCCCCAAG
AGTTTTTTCGCTGGGCCTATCTGGGGGTATTCAGCTTTGTATTGATTCTTTATGCTTTCCATCCCCAAATGGTTTCTGCA
GCCAGCCGAGTTGCCTGGTAG

Upstream 100 bases:

>100_bases
CTGACAAGACGCAGAAAAAAAGTTTTGAGCATGGGGAACCTAATGTAACTTACTTTTAAGCATAAGCCACAGCAACACCA
GAAGAGGAGTCACCCAAAAG

Downstream 100 bases:

>100_bases
CATGATCCCAAAGAACTTCTTTAGTTTGGGAGTGATGGCCTTGCAAGTTGCTTTAGATGCTTTTAATCAAGAACTTTTGA
CAAGTGACGGGTTGGTTTTG

Product: NnrU family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MLFTPFSDFLQKLGQYGSHWTVLALILGFACAHSGLAYLRPWGESRLGSRLYRIFFALVSLSLAPLLLIYFFNHRYDGVI
LWDLQAVPGIRTTVALLSALSFFFLYPATFNLLEIAAIRKPEIHLFETGIIRITRHPQMVGQVIWCVAHTLWIGSSFMVV
TSLGLIAYHLFAVWHGDHRLERKYGQAFRDLKARTSVIPGLAILQKRQQLRPQEFFRWAYLGVFSFVLILYAFHPQMVSA
ASRVAW

Sequences:

>Translated_246_residues
MLFTPFSDFLQKLGQYGSHWTVLALILGFACAHSGLAYLRPWGESRLGSRLYRIFFALVSLSLAPLLLIYFFNHRYDGVI
LWDLQAVPGIRTTVALLSALSFFFLYPATFNLLEIAAIRKPEIHLFETGIIRITRHPQMVGQVIWCVAHTLWIGSSFMVV
TSLGLIAYHLFAVWHGDHRLERKYGQAFRDLKARTSVIPGLAILQKRQQLRPQEFFRWAYLGVFSFVLILYAFHPQMVSA
ASRVAW
>Mature_246_residues
MLFTPFSDFLQKLGQYGSHWTVLALILGFACAHSGLAYLRPWGESRLGSRLYRIFFALVSLSLAPLLLIYFFNHRYDGVI
LWDLQAVPGIRTTVALLSALSFFFLYPATFNLLEIAAIRKPEIHLFETGIIRITRHPQMVGQVIWCVAHTLWIGSSFMVV
TSLGLIAYHLFAVWHGDHRLERKYGQAFRDLKARTSVIPGLAILQKRQQLRPQEFFRWAYLGVFSFVLILYAFHPQMVSA
ASRVAW

Specific function: Unknown

COG id: COG4094

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28237; Mature: 28237

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFTPFSDFLQKLGQYGSHWTVLALILGFACAHSGLAYLRPWGESRLGSRLYRIFFALVS
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHH
LSLAPLLLIYFFNHRYDGVILWDLQAVPGIRTTVALLSALSFFFLYPATFNLLEIAAIRK
HHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PEIHLFETGIIRITRHPQMVGQVIWCVAHTLWIGSSFMVVTSLGLIAYHLFAVWHGDHRL
CCEEEEECCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHH
ERKYGQAFRDLKARTSVIPGLAILQKRQQLRPQEFFRWAYLGVFSFVLILYAFHPQMVSA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASRVAW
HHHCCC
>Mature Secondary Structure
MLFTPFSDFLQKLGQYGSHWTVLALILGFACAHSGLAYLRPWGESRLGSRLYRIFFALVS
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHH
LSLAPLLLIYFFNHRYDGVILWDLQAVPGIRTTVALLSALSFFFLYPATFNLLEIAAIRK
HHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PEIHLFETGIIRITRHPQMVGQVIWCVAHTLWIGSSFMVVTSLGLIAYHLFAVWHGDHRL
CCEEEEECCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHH
ERKYGQAFRDLKARTSVIPGLAILQKRQQLRPQEFFRWAYLGVFSFVLILYAFHPQMVSA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASRVAW
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA