| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608380
Identifier: 86608380
GI number: 86608380
Start: 932848
End: 933651
Strand: Reverse
Name: 86608380
Synonym: CYB_0900
Alternate gene names: NA
Gene position: 933651-932848 (Counterclockwise)
Preceding gene: 86608381
Following gene: 86608374
Centisome position: 30.64
GC content: 62.69
Gene sequence:
>804_bases ATGGCCGAGATCCCGCCTCTCCTCGTCTTCGATAGCCCGGTGATCCTGGCCGGTCGTCTGGCTCTATGGCAAGAGTGGGC TCGATTTGGGGTGTGTGTGCTGCCGCAGGCAGTGATGGCCGAGCTAGAACGCCTGAGCCGGCAGGCTATTGATCCCCAAG AAGAATCGACAGCCCGCGAGTTTTTGCGCCACTGGCCCAGCCTGGGGTTTGCCGTCTCAGAAGCCCGTGCCCTGGTGGGT GGCGCCGGTGCCGGCGATCAGTCCATGAGGGTACGTTTGGAAGAAGCGATTGCCGAATGCGCCTATGCCCTGGCCCAGCA GCAGCCGGGAACGCTGGTGGTTTTGGTCAGCAACGACCGGCCTTTGGTGGGGCGAATTCAGGGTCTGGGTCTCAACAACC TCTGTGCCATCTCTCTGGCAGAGCTGAACCGGTGGATGCGTCAGCAGCAGCGCCCTCAGGCTGTGGTTATGGCTTTGAAT CGGTTACCAGGGCCACCCATTCCTGCCGCCCAGTTGACGTCCTCTACCCTCGCTCCACCTGCCCGTCCCTTGAGTTCCTC TCCAGCTTCCGGGAACCCCCCCGCCCAGGCGCGGCAGCGGTCTGGAGCTGCTCAGGTGGGGCCGATCACAGCCCGCCTCT GGCCCTTTTTGAAAAGCCTACAGAATGCCCTTGCGTTGTTGCTGGCCCTGGTTTTCCTCTCGGCAACCGGGTTGCTGGCC TGGCGCCTGCTCGATCCAGAAGGAAGTGAAGGGATCTGGCGGCGGCTACCTCTCTCTCGGATCCCTTGGATTCGGGATCT GTAG
Upstream 100 bases:
>100_bases ACCCGCTGGCCATCCGCCTCTGCCTGGCAGAGGGATCCCTGCTACCCAAGTCTTCGGGGAAGCTGCACAATTGAGGTTAA GTCCAACGCTGGCGCATCCC
Downstream 100 bases:
>100_bases TCCTCAAAGCTACTGCTCAGCAATCGTAACGTTAAAGCCCTTATTTTTCAGGGTTTCCGCATGATAGCGGGCATACTCCA GTTGCTCAAATGCTGCCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MAEIPPLLVFDSPVILAGRLALWQEWARFGVCVLPQAVMAELERLSRQAIDPQEESTAREFLRHWPSLGFAVSEARALVG GAGAGDQSMRVRLEEAIAECAYALAQQQPGTLVVLVSNDRPLVGRIQGLGLNNLCAISLAELNRWMRQQQRPQAVVMALN RLPGPPIPAAQLTSSTLAPPARPLSSSPASGNPPAQARQRSGAAQVGPITARLWPFLKSLQNALALLLALVFLSATGLLA WRLLDPEGSEGIWRRLPLSRIPWIRDL
Sequences:
>Translated_267_residues MAEIPPLLVFDSPVILAGRLALWQEWARFGVCVLPQAVMAELERLSRQAIDPQEESTAREFLRHWPSLGFAVSEARALVG GAGAGDQSMRVRLEEAIAECAYALAQQQPGTLVVLVSNDRPLVGRIQGLGLNNLCAISLAELNRWMRQQQRPQAVVMALN RLPGPPIPAAQLTSSTLAPPARPLSSSPASGNPPAQARQRSGAAQVGPITARLWPFLKSLQNALALLLALVFLSATGLLA WRLLDPEGSEGIWRRLPLSRIPWIRDL >Mature_266_residues AEIPPLLVFDSPVILAGRLALWQEWARFGVCVLPQAVMAELERLSRQAIDPQEESTAREFLRHWPSLGFAVSEARALVGG AGAGDQSMRVRLEEAIAECAYALAQQQPGTLVVLVSNDRPLVGRIQGLGLNNLCAISLAELNRWMRQQQRPQAVVMALNR LPGPPIPAAQLTSSTLAPPARPLSSSPASGNPPAQARQRSGAAQVGPITARLWPFLKSLQNALALLLALVFLSATGLLAW RLLDPEGSEGIWRRLPLSRIPWIRDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28969; Mature: 28838
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIPPLLVFDSPVILAGRLALWQEWARFGVCVLPQAVMAELERLSRQAIDPQEESTARE CCCCCCEEEECCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCCHHHHHHH FLRHWPSLGFAVSEARALVGGAGAGDQSMRVRLEEAIAECAYALAQQQPGTLVVLVSNDR HHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC PLVGRIQGLGLNNLCAISLAELNRWMRQQQRPQAVVMALNRLPGPPIPAAQLTSSTLAPP CHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCC ARPLSSSPASGNPPAQARQRSGAAQVGPITARLWPFLKSLQNALALLLALVFLSATGLLA CCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE WRLLDPEGSEGIWRRLPLSRIPWIRDL EEEECCCCCCCHHHHCCHHHCCCCCCC >Mature Secondary Structure AEIPPLLVFDSPVILAGRLALWQEWARFGVCVLPQAVMAELERLSRQAIDPQEESTARE CCCCCEEEECCCHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHCCCCCHHHHHHH FLRHWPSLGFAVSEARALVGGAGAGDQSMRVRLEEAIAECAYALAQQQPGTLVVLVSNDR HHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC PLVGRIQGLGLNNLCAISLAELNRWMRQQQRPQAVVMALNRLPGPPIPAAQLTSSTLAPP CHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCC ARPLSSSPASGNPPAQARQRSGAAQVGPITARLWPFLKSLQNALALLLALVFLSATGLLA CCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE WRLLDPEGSEGIWRRLPLSRIPWIRDL EEEECCCCCCCHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA