| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86608368
Identifier: 86608368
GI number: 86608368
Start: 921380
End: 921841
Strand: Reverse
Name: 86608368
Synonym: CYB_0888
Alternate gene names: NA
Gene position: 921841-921380 (Counterclockwise)
Preceding gene: 86608369
Following gene: 86608367
Centisome position: 30.26
GC content: 57.58
Gene sequence:
>462_bases ATGAACTACTGGCTGATGAAATCTGAGCCCAGCATCTATAGCATCTGGGATTTGCAGCGGGAGGGCCAAACCCTTTGGGA TGGCGTGCGCAACTACCAAGCCCGCAACTATCTGAAGGCAATGCAGCCTGGGGATCGCGCCTTTTTCTACCATTCCAATG CCGAGCCACCCGGAATTGCCGGTTTGATGGAGATCCTGGAAACCCACGTGGTGGATCCCAGCCAGTTTGATCCGACCAGC CCCTACTACGATCCCAAGTCCACTCCAGCAGATCCCCGGTGGTACACGGTGCGGGTGCAATTTTTGGCTGCTTTTGAAAG AGTGATCCCTTTGGCCAAATTGCGGGCCACCTTCACCCCGGAGGAGCTGGAGGTGGTGCGGCGGGGCACACGCCTGTCGG TGATACCTGTGGCTGCAGAGGTTGCGGAGCGCTTGCTCTCACTGGCAAACCTCTCCTCTTGA
Upstream 100 bases:
>100_bases CCCAGAAAAGTCCGGCCCCTACGGCTTGAAGATGCTGCGCAACTTTGTCGAGTTTGTTGCCCGTTGTTCCCCCTTATCTG CTCCCAGAGCCTAGTGCCCC
Downstream 100 bases:
>100_bases TCTGGGGTAAGCTTCCCGACGGTCTCGCCCGACCATTTCCTCTCCGAGGCAGCTAGCCTCTACAGCGCCGACTCTGTTTT GCTGCCAATTTGACCTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MNYWLMKSEPSIYSIWDLQREGQTLWDGVRNYQARNYLKAMQPGDRAFFYHSNAEPPGIAGLMEILETHVVDPSQFDPTS PYYDPKSTPADPRWYTVRVQFLAAFERVIPLAKLRATFTPEELEVVRRGTRLSVIPVAAEVAERLLSLANLSS
Sequences:
>Translated_153_residues MNYWLMKSEPSIYSIWDLQREGQTLWDGVRNYQARNYLKAMQPGDRAFFYHSNAEPPGIAGLMEILETHVVDPSQFDPTS PYYDPKSTPADPRWYTVRVQFLAAFERVIPLAKLRATFTPEELEVVRRGTRLSVIPVAAEVAERLLSLANLSS >Mature_153_residues MNYWLMKSEPSIYSIWDLQREGQTLWDGVRNYQARNYLKAMQPGDRAFFYHSNAEPPGIAGLMEILETHVVDPSQFDPTS PYYDPKSTPADPRWYTVRVQFLAAFERVIPLAKLRATFTPEELEVVRRGTRLSVIPVAAEVAERLLSLANLSS
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=165, Percent_Identity=45.4545454545455, Blast_Score=137, Evalue=4e-33, Organism=Homo sapiens, GI40806221, Length=165, Percent_Identity=45.4545454545455, Blast_Score=137, Evalue=4e-33, Organism=Homo sapiens, GI7661804, Length=165, Percent_Identity=45.4545454545455, Blast_Score=137, Evalue=4e-33, Organism=Homo sapiens, GI83267859, Length=103, Percent_Identity=51.4563106796116, Blast_Score=111, Evalue=2e-25, Organism=Homo sapiens, GI40806219, Length=103, Percent_Identity=51.4563106796116, Blast_Score=111, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17536; Mature: 17536
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYWLMKSEPSIYSIWDLQREGQTLWDGVRNYQARNYLKAMQPGDRAFFYHSNAEPPGIA CCEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHH GLMEILETHVVDPSQFDPTSPYYDPKSTPADPRWYTVRVQFLAAFERVIPLAKLRATFTP HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCH EELEVVRRGTRLSVIPVAAEVAERLLSLANLSS HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNYWLMKSEPSIYSIWDLQREGQTLWDGVRNYQARNYLKAMQPGDRAFFYHSNAEPPGIA CCEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHH GLMEILETHVVDPSQFDPTSPYYDPKSTPADPRWYTVRVQFLAAFERVIPLAKLRATFTP HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCH EELEVVRRGTRLSVIPVAAEVAERLLSLANLSS HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA