Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
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Accession | NC_007776 |
Length | 3,046,682 |
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The map label for this gene is 86608055
Identifier: 86608055
GI number: 86608055
Start: 572901
End: 573218
Strand: Direct
Name: 86608055
Synonym: CYB_0563
Alternate gene names: NA
Gene position: 572901-573218 (Clockwise)
Preceding gene: 86608054
Following gene: 86608056
Centisome position: 18.8
GC content: 51.26
Gene sequence:
>318_bases ATGGGTAGAACACTCTATGTGTCCCAACAGGATTGCTACCTCAGCCTCGACCAGGAACGCCTGGTTGTCAAACGGGCTGG AGCTGTTCTTCAACAGGCTCAATTGCCCCACTTGGATCAGATTTTGATCTTTGGCCATGCCCAAGTCACAACCCAACTGA TCCAGAGTTGCCTAGAGCGCAACATCCCCATCGCCTATCTTTCCCACATGGGGTACTGTGCTGGGCCGTCATCAACCGGC AGGTGCAGACCTACAAGCAGTTTGTATAATGATCAGATCCCTGTTTACTTAAGGACTATGAGGAGAACCCTCGGGTAA
Upstream 100 bases:
>100_bases CATCTTCCCTTACAGCATTTTTGGGCCTGACTTTTAACTTGAAGAAGACCCCGTTTTGTTCCCACCTCAGCTTCAATTTT AGGCTTCTGGGAGTGGCCTC
Downstream 100 bases:
>100_bases GCGAGGCCTGGGTCTACCTGGGCATGCTACGATTGTTGGTGAAGCGGCTAGCCAAGGCCGCGTAACTGCCCGTGGAGGAC TTTTACGACAGCCTATAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MGRTLYVSQQDCYLSLDQERLVVKRAGAVLQQAQLPHLDQILIFGHAQVTTQLIQSCLERNIPIAYLSHMGYCAGPSSTG RCRPTSSLYNDQIPVYLRTMRRTLG
Sequences:
>Translated_105_residues MGRTLYVSQQDCYLSLDQERLVVKRAGAVLQQAQLPHLDQILIFGHAQVTTQLIQSCLERNIPIAYLSHMGYCAGPSSTG RCRPTSSLYNDQIPVYLRTMRRTLG >Mature_104_residues GRTLYVSQQDCYLSLDQERLVVKRAGAVLQQAQLPHLDQILIFGHAQVTTQLIQSCLERNIPIAYLSHMGYCAGPSSTGR CRPTSSLYNDQIPVYLRTMRRTLG
Specific function: Unknown
COG id: COG1518
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11826; Mature: 11695
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTLYVSQQDCYLSLDQERLVVKRAGAVLQQAQLPHLDQILIFGHAQVTTQLIQSCLER CCCEEEEECCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHC NIPIAYLSHMGYCAGPSSTGRCRPTSSLYNDQIPVYLRTMRRTLG CCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure GRTLYVSQQDCYLSLDQERLVVKRAGAVLQQAQLPHLDQILIFGHAQVTTQLIQSCLER CCEEEEECCCCEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHC NIPIAYLSHMGYCAGPSSTGRCRPTSSLYNDQIPVYLRTMRRTLG CCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA