Click here to switch to the map view.

The map label for this gene is 86608056

Identifier: 86608056

GI number: 86608056

Start: 573326

End: 574858

Strand: Direct

Name: 86608056

Synonym: CYB_0564

Alternate gene names: NA

Gene position: 573326-574858 (Clockwise)

Preceding gene: 86608055

Following gene: 86608060

Centisome position: 18.82

GC content: 58.64

Gene sequence:

>1533_bases
ATGGCAACGCTAACGGATGAACAAAAAGCGGTCGTAGAAGCCGCAAAGACTGGTAGTCACCTCAAGGTGGTGGCCTTCGC
CGGAGCGGGCAAGACTTTCACCCTGGTAGAGGTCGCCAAGGCGCTGGCAGGCAAGCGCATCCTCTACCTGACCTTTAGCA
AGGCCTTGGCAGAAGAGGCCAAGCAGAAGTTCGGCAGCCTGGCCGACGTGATGACCAACCACGCCCTGGCCTACAAGGAG
ACGGGCAAACTCTTTGCAGAGAAAAAACGCTTGGGGGGCAGCCTCTTCAAGGCCCGCCGCAAGCTGGCAGAGGACATGCC
CGACCTCGATTGCCTTCTGGAGTGGGGCTCCCGCGACCGGGAAGAAGCCCTGTTCCCGGTGCTTGAGACCGTAAATCGCT
TCACCCAGTCGGAGGTTGAGACTGTCACAGCTGAACACATCCCTGAAATCCTGCGCCTGAAGATCGAGGCGGAAGATGAG
AGATTTGATGACTTTGCGGCCTGCCTGGTGCCCCTGGCCCAGCGGGCCTGGGAGCTTTTAGTAGATCCAGAGGCCAGCTA
TCCGGTCAGCCACGATGTCTACCTCAAGCTCTACCAGCTCTCCCGCCCTCAGCTCCCCTATGATGTGATTCTCTTTGACG
AAGCGCAGGATGCCAATCCTGCCATGCTGGGCATCCTGCTGCCCCAGGCTGCTCGGCGTATCTTCGTGGGTGACCCCCAC
CAGCAGATCTACGCCTGGCGGGGCGCGGTGAACGCTATGGAACGCCTTGACGGGCAGGAGCTCCCCCTCTCTCAGTCTTT
TCGTTTCAAGGAACACATTGCAGACGAGGCCAGCGAGCTGCTCTATCTCTTCAAAGGGGAGACCCGCCGGGTGCGGGGCA
ACCCTTACCCAAAACAGGACGGTTCTACCGCCATCCTCAGCCGCACCAACGTCGGGGCCCTTCGGGAGGTGCTGGTACTA
TTAGATCAGGGCAAAAAAGTAGCTCTGGTGAATAAGATAGAGGAGCTCACCGATGTCCTGAAAGCCGCCTACGACCTTTA
CCGGGGGCAGAAGCCCCGCCACCCAGAGTTCTCGCTCTTCAGAAGCTGGGAGCAACTGAAGTACCTCATCGAGCGCTTTC
CCTCTATAGCCGCACAGTACAGGCCCTACGAGCGCCTTGTCGAGGAGTACAAGGACAGGATTCCCAAGGTGTGCCATACC
TTGAGCAACAGTTTGGTGGACGAAGAACATGCTGAGGTGGTAGTCTCCACCGCTCACCGCTCCAAGGGCCGCGAGTGGGA
TCGGGTGACTCTGGCAGAAGACTTCACAGGGGTGACCTTAGCCCAGGAGAACCCTACACATCGGTGTGTGAAGCTGTACC
CAGAGGAGGCCAACCTGACCTATGTGGCCTTCACGCGCGCCCGCGATACCCTGGTTAAGGGAGCTTTCACAGAGGCCCTT
GAACGACAAAAAGATCTCGCTAGGGCGCTCAAAGCTGGTAAGCTTCAGCTCTGTACACCAGAGATTGAGGCGCAAGCACG
CAAGGCCGATTGA

Upstream 100 bases:

>100_bases
CTGGGTCTACCTGGGCATGCTACGATTGTTGGTGAAGCGGCTAGCCAAGGCCGCGTAACTGCCCGTGGAGGACTTTTACG
ACAGCCTATAATCCAAATTA

Downstream 100 bases:

>100_bases
GCTCCTCTCGGTCCATTCCGCCCTCCATGCTTAACCCACAAAATACGCGACACTACCTGGCGGAATATCGACAGCGGTAT
TTCCGTCAGGTGGTGCTGCT

Product: UvrD/Rep family helicase

Products: NA

Alternate protein names: Superfamily I DNA/RNA Helicase-Like Protein; Helicase; Superfamily I DNA/RNA Helicase; Superfamily I DNA And RNA Helicase; Helicase Superfamily Protein I; UvrD/REP Helicase; F-Box Only Protein; I DNA And RNA Helicase Protein; UvrD/Rep Family Helicase; I DNA And RNA Helicase; I DNA/RNA Helicase; Helicase Superfamily I

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MATLTDEQKAVVEAAKTGSHLKVVAFAGAGKTFTLVEVAKALAGKRILYLTFSKALAEEAKQKFGSLADVMTNHALAYKE
TGKLFAEKKRLGGSLFKARRKLAEDMPDLDCLLEWGSRDREEALFPVLETVNRFTQSEVETVTAEHIPEILRLKIEAEDE
RFDDFAACLVPLAQRAWELLVDPEASYPVSHDVYLKLYQLSRPQLPYDVILFDEAQDANPAMLGILLPQAARRIFVGDPH
QQIYAWRGAVNAMERLDGQELPLSQSFRFKEHIADEASELLYLFKGETRRVRGNPYPKQDGSTAILSRTNVGALREVLVL
LDQGKKVALVNKIEELTDVLKAAYDLYRGQKPRHPEFSLFRSWEQLKYLIERFPSIAAQYRPYERLVEEYKDRIPKVCHT
LSNSLVDEEHAEVVVSTAHRSKGREWDRVTLAEDFTGVTLAQENPTHRCVKLYPEEANLTYVAFTRARDTLVKGAFTEAL
ERQKDLARALKAGKLQLCTPEIEAQARKAD

Sequences:

>Translated_510_residues
MATLTDEQKAVVEAAKTGSHLKVVAFAGAGKTFTLVEVAKALAGKRILYLTFSKALAEEAKQKFGSLADVMTNHALAYKE
TGKLFAEKKRLGGSLFKARRKLAEDMPDLDCLLEWGSRDREEALFPVLETVNRFTQSEVETVTAEHIPEILRLKIEAEDE
RFDDFAACLVPLAQRAWELLVDPEASYPVSHDVYLKLYQLSRPQLPYDVILFDEAQDANPAMLGILLPQAARRIFVGDPH
QQIYAWRGAVNAMERLDGQELPLSQSFRFKEHIADEASELLYLFKGETRRVRGNPYPKQDGSTAILSRTNVGALREVLVL
LDQGKKVALVNKIEELTDVLKAAYDLYRGQKPRHPEFSLFRSWEQLKYLIERFPSIAAQYRPYERLVEEYKDRIPKVCHT
LSNSLVDEEHAEVVVSTAHRSKGREWDRVTLAEDFTGVTLAQENPTHRCVKLYPEEANLTYVAFTRARDTLVKGAFTEAL
ERQKDLARALKAGKLQLCTPEIEAQARKAD
>Mature_509_residues
ATLTDEQKAVVEAAKTGSHLKVVAFAGAGKTFTLVEVAKALAGKRILYLTFSKALAEEAKQKFGSLADVMTNHALAYKET
GKLFAEKKRLGGSLFKARRKLAEDMPDLDCLLEWGSRDREEALFPVLETVNRFTQSEVETVTAEHIPEILRLKIEAEDER
FDDFAACLVPLAQRAWELLVDPEASYPVSHDVYLKLYQLSRPQLPYDVILFDEAQDANPAMLGILLPQAARRIFVGDPHQ
QIYAWRGAVNAMERLDGQELPLSQSFRFKEHIADEASELLYLFKGETRRVRGNPYPKQDGSTAILSRTNVGALREVLVLL
DQGKKVALVNKIEELTDVLKAAYDLYRGQKPRHPEFSLFRSWEQLKYLIERFPSIAAQYRPYERLVEEYKDRIPKVCHTL
SNSLVDEEHAEVVVSTAHRSKGREWDRVTLAEDFTGVTLAQENPTHRCVKLYPEEANLTYVAFTRARDTLVKGAFTEALE
RQKDLARALKAGKLQLCTPEIEAQARKAD

Specific function: Unknown

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI30795117, Length=526, Percent_Identity=32.5095057034221, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI30795119, Length=527, Percent_Identity=32.258064516129, Blast_Score=194, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57737; Mature: 57605

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLTDEQKAVVEAAKTGSHLKVVAFAGAGKTFTLVEVAKALAGKRILYLTFSKALAEEA
CCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCEEEEEEHHHHHHHHH
KQKFGSLADVMTNHALAYKETGKLFAEKKRLGGSLFKARRKLAEDMPDLDCLLEWGSRDR
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHCCCCCH
EEALFPVLETVNRFTQSEVETVTAEHIPEILRLKIEAEDERFDDFAACLVPLAQRAWELL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHH
VDPEASYPVSHDVYLKLYQLSRPQLPYDVILFDEAQDANPAMLGILLPQAARRIFVGDPH
CCCCCCCCCCHHHHHHEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCEEECCCCH
QQIYAWRGAVNAMERLDGQELPLSQSFRFKEHIADEASELLYLFKGETRRVRGNPYPKQD
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEHCCCCCCCCCCCCCCCCC
GSTAILSRTNVGALREVLVLLDQGKKVALVNKIEELTDVLKAAYDLYRGQKPRHPEFSLF
CCEEEEECCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
RSWEQLKYLIERFPSIAAQYRPYERLVEEYKDRIPKVCHTLSNSLVDEEHAEVVVSTAHR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SKGREWDRVTLAEDFTGVTLAQENPTHRCVKLYPEEANLTYVAFTRARDTLVKGAFTEAL
CCCCCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHH
ERQKDLARALKAGKLQLCTPEIEAQARKAD
HHHHHHHHHHHCCCEEEECCHHHHHCCCCC
>Mature Secondary Structure 
ATLTDEQKAVVEAAKTGSHLKVVAFAGAGKTFTLVEVAKALAGKRILYLTFSKALAEEA
CCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCEEEEEEHHHHHHHHH
KQKFGSLADVMTNHALAYKETGKLFAEKKRLGGSLFKARRKLAEDMPDLDCLLEWGSRDR
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHCCCCCH
EEALFPVLETVNRFTQSEVETVTAEHIPEILRLKIEAEDERFDDFAACLVPLAQRAWELL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHH
VDPEASYPVSHDVYLKLYQLSRPQLPYDVILFDEAQDANPAMLGILLPQAARRIFVGDPH
CCCCCCCCCCHHHHHHEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCEEECCCCH
QQIYAWRGAVNAMERLDGQELPLSQSFRFKEHIADEASELLYLFKGETRRVRGNPYPKQD
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEEHCCCCCCCCCCCCCCCCC
GSTAILSRTNVGALREVLVLLDQGKKVALVNKIEELTDVLKAAYDLYRGQKPRHPEFSLF
CCEEEEECCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
RSWEQLKYLIERFPSIAAQYRPYERLVEEYKDRIPKVCHTLSNSLVDEEHAEVVVSTAHR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SKGREWDRVTLAEDFTGVTLAQENPTHRCVKLYPEEANLTYVAFTRARDTLVKGAFTEAL
CCCCCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHH
ERQKDLARALKAGKLQLCTPEIEAQARKAD
HHHHHHHHHHHCCCEEEECCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA