Click here to switch to the map view.

The map label for this gene is 86608054

Identifier: 86608054

GI number: 86608054

Start: 571691

End: 572527

Strand: Direct

Name: 86608054

Synonym: CYB_0562

Alternate gene names: NA

Gene position: 571691-572527 (Clockwise)

Preceding gene: 86608053

Following gene: 86608055

Centisome position: 18.76

GC content: 59.5

Gene sequence:

>837_bases
ATGGAAGCGCGGCATTGGCTGGCCCTGATGGGATCCCTGGTGGTCAGTGCCTTCTGGGGATGGGTGGAGTCTGTCTGGGG
GGTGACAGTGCGAGTGCAATTGGCCGATACCACTGCCCCTCTGGTGGTAGGCGTTTCTCTCCCTGCCCAACTGATCAACG
GTCGGGGAGAGGTGCTGGCAGATCTGCCCCCTATGCAAGGGTTTTTGGCTCAGCCCAGCCCTCAAGGGGTGCGTCTGCAT
GGGGTGGTTGACCCGGTGCTGTTCATCGAACCTCAGGAGGGTGGCCTGGTGGCAGTGAATGGCCGCTGGTACTCCGGCAA
GGTGCTCTTGACTGGCTACAACATGGTGATGGCCATCAACTACGTGGATCTAGAAGACTATGTGGCCAGTGTGGTGGATG
CAGAAATGGGATCCCGGTTCTTCCCAGAAGCCCTGAAGGCGCAAGCGGTGGCAGCCCGCAGCTACGTTCTTTACCATCGC
AACTCCCGCGGTTGGTTTGATGTGTTTAGCGATACTCGCTCCCAGGTGTACCGAGGGCTTTCCCAGCGGTCGGCAGCCGC
CCTGGAAGCAACACAAGCCACCCGTGGTGTGGTCATGGTGTATGGGGGTCAGTTTGTCAATGCCATGTACAGCGCCAGCA
GCGGCGGCCAAACCGTCGGGGTGAGTGGGATCCCTTATTTGAGGAGCTTACCGGATGTCAGCCCCTATCCCAAGTTTGGG
CATGGCATTGGCATGAGCCAGTGGGGCGCCCAAGAATTGGCCCGCCGAGGCTGGACTTACCGCCAAATTTTGGCCTACTA
CTACCGAGGGGTCAGCTTTGCTCGTTTGCCAGAGTGA

Upstream 100 bases:

>100_bases
AAGCCCTCTGCAGTTTCTACAGACAAACCGGCCCATTTCTGGAAACTCGCCCTATCCTAAGTTGGAGTTGGTGTACAAAA
AGCAACTCTGGGCACGGGCT

Downstream 100 bases:

>100_bases
GACCTTCAGTGCCCTGATTTGCTCTGTCTCGTCTGCGTCAACCGAACCGCGGCTTTTGGGCCTGAAAGACCTCTTGGGCT
TTGGGATCCCCTCGCTGAGG

Product: SpoIID/LytB domain-containing protein

Products: NA

Alternate protein names: H-34 [H]

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MEARHWLALMGSLVVSAFWGWVESVWGVTVRVQLADTTAPLVVGVSLPAQLINGRGEVLADLPPMQGFLAQPSPQGVRLH
GVVDPVLFIEPQEGGLVAVNGRWYSGKVLLTGYNMVMAINYVDLEDYVASVVDAEMGSRFFPEALKAQAVAARSYVLYHR
NSRGWFDVFSDTRSQVYRGLSQRSAAALEATQATRGVVMVYGGQFVNAMYSASSGGQTVGVSGIPYLRSLPDVSPYPKFG
HGIGMSQWGAQELARRGWTYRQILAYYYRGVSFARLPE

Sequences:

>Translated_278_residues
MEARHWLALMGSLVVSAFWGWVESVWGVTVRVQLADTTAPLVVGVSLPAQLINGRGEVLADLPPMQGFLAQPSPQGVRLH
GVVDPVLFIEPQEGGLVAVNGRWYSGKVLLTGYNMVMAINYVDLEDYVASVVDAEMGSRFFPEALKAQAVAARSYVLYHR
NSRGWFDVFSDTRSQVYRGLSQRSAAALEATQATRGVVMVYGGQFVNAMYSASSGGQTVGVSGIPYLRSLPDVSPYPKFG
HGIGMSQWGAQELARRGWTYRQILAYYYRGVSFARLPE
>Mature_278_residues
MEARHWLALMGSLVVSAFWGWVESVWGVTVRVQLADTTAPLVVGVSLPAQLINGRGEVLADLPPMQGFLAQPSPQGVRLH
GVVDPVLFIEPQEGGLVAVNGRWYSGKVLLTGYNMVMAINYVDLEDYVASVVDAEMGSRFFPEALKAQAVAARSYVLYHR
NSRGWFDVFSDTRSQVYRGLSQRSAAALEATQATRGVVMVYGGQFVNAMYSASSGGQTVGVSGIPYLRSLPDVSPYPKFG
HGIGMSQWGAQELARRGWTYRQILAYYYRGVSFARLPE

Specific function: Might be involved in sporulation [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 30436; Mature: 30436

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEARHWLALMGSLVVSAFWGWVESVWGVTVRVQLADTTAPLVVGVSLPAQLINGRGEVLA
CCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEECCHHHHHCCCCCEEE
DLPPMQGFLAQPSPQGVRLHGVVDPVLFIEPQEGGLVAVNGRWYSGKVLLTGYNMVMAIN
CCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEEEECCEEEECEEEEEECCEEEEEE
YVDLEDYVASVVDAEMGSRFFPEALKAQAVAARSYVLYHRNSRGWFDVFSDTRSQVYRGL
EECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHH
SQRSAAALEATQATRGVVMVYGGQFVNAMYSASSGGQTVGVSGIPYLRSLPDVSPYPKFG
HHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCCCEECCCCCCHHHCCCCCCCCCCCC
HGIGMSQWGAQELARRGWTYRQILAYYYRGVSFARLPE
CCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCEECCCC
>Mature Secondary Structure
MEARHWLALMGSLVVSAFWGWVESVWGVTVRVQLADTTAPLVVGVSLPAQLINGRGEVLA
CCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEECCHHHHHCCCCCEEE
DLPPMQGFLAQPSPQGVRLHGVVDPVLFIEPQEGGLVAVNGRWYSGKVLLTGYNMVMAIN
CCCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEEEECCEEEECEEEEEECCEEEEEE
YVDLEDYVASVVDAEMGSRFFPEALKAQAVAARSYVLYHRNSRGWFDVFSDTRSQVYRGL
EECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHH
SQRSAAALEATQATRGVVMVYGGQFVNAMYSASSGGQTVGVSGIPYLRSLPDVSPYPKFG
HHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCCCEECCCCCCHHHCCCCCCCCCCCC
HGIGMSQWGAQELARRGWTYRQILAYYYRGVSFARLPE
CCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA