Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is ordL [H]
Identifier: 86361071
GI number: 86361071
Start: 382830
End: 384104
Strand: Reverse
Name: ordL [H]
Synonym: RHE_PF00341
Alternate gene names: 86361071
Gene position: 384104-382830 (Counterclockwise)
Preceding gene: 86361072
Following gene: 86361067
Centisome position: 59.78
GC content: 62.27
Gene sequence:
>1275_bases ATGCAGTTCCAATCCTACTGGCACGACACGGCCCGCCCTTTTGCCGAGGCGGCCCAAGGTCCTGTCGAGGGGCATTACGA CGTCGCCGTCATCGGCGCCGGCTTCACCGGGCTTGCCGCTGCGCGCCAGCTTGCGAAAGCCGGCGTCAAGGTCGTCGTGC TGGAAGCCGAGCATGTCGGCTGGGGAGCATCGGGACGCAATGGCGGCCATCTCAACAACGGGCTTGCCCATAGCTTCCTG TCGGCCAAGAGCGCACTCGGAACGGAGCGGGCTATTGCGCTCTATCGAGCCTTCGACGATTCCATCGATGCGATCGAGGC GATCATCGCCCAGGAGGGGATCGACTGCAGTTTCCGGCGTGCCGGGAAGCTGAAGCTCGCTTCCAAGCCGCAGCATTTCG ATGCCATTGCCCGGAATTTCGAGGCTGTGCATATAGAGGTCGATCCGGAGACGGCGCTTCTGACGCCAAGCGACCTGAAG AATGAGATCGGGTCGCCTTTCCATGGCGCCATGCTCTCGAAGAAGAGCGCGATGATGCATATGGGCCGCTATGTCATGGG GCTTGCCACTGCTGCCGCCCGTCATGGCGCCATCATTTTCGAACGGACTGCCGTAACCGGCCACAGGCAAGGCAATGGCC GCCATAGTCTCGAAACCGGGCGGGGCACCGTCACCGCCGACCACGTGCTGGTCGCGACAGGCGCCTACACGCCGTCGCTC TTCGGTCATTTCCGCCGTCGGATCATCTCCGTCGGCAGCTTCCTGATCGCCACCCGTCCGCTGAGCGACGCCGAAATCGC AGCGACGATGCCGGGCAACCGGACTTGCGTCACCTCGATGAACATCGGCAATTATTTTCGCCTGTCGCCGGACAAGCGGC TGATCTTCGGCGGCCGCGCCCGCTTTTCCGCCACGTCGGATCAGCGGTCGGATGCAAAGAGCGGCGATATTCTGCGCACA AGCATGGCGGAAATCTTCCCGCAGCTTGCCGGCGTCGAGATCGACTATTGCTGGGGGGGGCTCGTCGATATGACGAAGGA CCGCTATCCGCGCGCGGGCTATGTCGACGGCGTCTGGTATGCCATGGGCTATTCCGGCCATGGCGCCCAGCTCTCCACTC ACCTCGGCATGATGATCGCCGACGCCATCATGGGCAAGGCGGACCGCAATCCGGTGAAAGGGCTAGAATGGCCAGCCGTT CCCGGTCATTTCGGCAAGCCGTGGTTCCTGCCAATTGTTGGGCTCTATTACAAGACACTTGATCGCTTCATGTAA
Upstream 100 bases:
>100_bases AATCGCGGCCACGAGCCGGCCAATCCCTATTACGGCTATGTCGAAATCGCTGGTATCTCGGGCTTGCCTGGCGTCGTCGG CCTCTGACGGAGACAAGCGG
Downstream 100 bases:
>100_bases GCGCGGCATTGCGAGAGCGGCTCAGCCGTTCGGCGCATATGGCAAACCCTTGCGGCGGTGCGAAACCAGCAGAATCTAAG ATCTAAGCTTGCGACGTCGT
Product: FAD-dependent oxidoreductase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MQFQSYWHDTARPFAEAAQGPVEGHYDVAVIGAGFTGLAAARQLAKAGVKVVVLEAEHVGWGASGRNGGHLNNGLAHSFL SAKSALGTERAIALYRAFDDSIDAIEAIIAQEGIDCSFRRAGKLKLASKPQHFDAIARNFEAVHIEVDPETALLTPSDLK NEIGSPFHGAMLSKKSAMMHMGRYVMGLATAAARHGAIIFERTAVTGHRQGNGRHSLETGRGTVTADHVLVATGAYTPSL FGHFRRRIISVGSFLIATRPLSDAEIAATMPGNRTCVTSMNIGNYFRLSPDKRLIFGGRARFSATSDQRSDAKSGDILRT SMAEIFPQLAGVEIDYCWGGLVDMTKDRYPRAGYVDGVWYAMGYSGHGAQLSTHLGMMIADAIMGKADRNPVKGLEWPAV PGHFGKPWFLPIVGLYYKTLDRFM
Sequences:
>Translated_424_residues MQFQSYWHDTARPFAEAAQGPVEGHYDVAVIGAGFTGLAAARQLAKAGVKVVVLEAEHVGWGASGRNGGHLNNGLAHSFL SAKSALGTERAIALYRAFDDSIDAIEAIIAQEGIDCSFRRAGKLKLASKPQHFDAIARNFEAVHIEVDPETALLTPSDLK NEIGSPFHGAMLSKKSAMMHMGRYVMGLATAAARHGAIIFERTAVTGHRQGNGRHSLETGRGTVTADHVLVATGAYTPSL FGHFRRRIISVGSFLIATRPLSDAEIAATMPGNRTCVTSMNIGNYFRLSPDKRLIFGGRARFSATSDQRSDAKSGDILRT SMAEIFPQLAGVEIDYCWGGLVDMTKDRYPRAGYVDGVWYAMGYSGHGAQLSTHLGMMIADAIMGKADRNPVKGLEWPAV PGHFGKPWFLPIVGLYYKTLDRFM >Mature_424_residues MQFQSYWHDTARPFAEAAQGPVEGHYDVAVIGAGFTGLAAARQLAKAGVKVVVLEAEHVGWGASGRNGGHLNNGLAHSFL SAKSALGTERAIALYRAFDDSIDAIEAIIAQEGIDCSFRRAGKLKLASKPQHFDAIARNFEAVHIEVDPETALLTPSDLK NEIGSPFHGAMLSKKSAMMHMGRYVMGLATAAARHGAIIFERTAVTGHRQGNGRHSLETGRGTVTADHVLVATGAYTPSL FGHFRRRIISVGSFLIATRPLSDAEIAATMPGNRTCVTSMNIGNYFRLSPDKRLIFGGRARFSATSDQRSDAKSGDILRT SMAEIFPQLAGVEIDYCWGGLVDMTKDRYPRAGYVDGVWYAMGYSGHGAQLSTHLGMMIADAIMGKADRNPVKGLEWPAV PGHFGKPWFLPIVGLYYKTLDRFM
Specific function: Unknown
COG id: COG0665
COG function: function code E; Glycine/D-amino acid oxidases (deaminating)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=405, Percent_Identity=31.8518518518519, Blast_Score=171, Evalue=7e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 45872; Mature: 45872
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFQSYWHDTARPFAEAAQGPVEGHYDVAVIGAGFTGLAAARQLAKAGVKVVVLEAEHVG CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCC WGASGRNGGHLNNGLAHSFLSAKSALGTERAIALYRAFDDSIDAIEAIIAQEGIDCSFRR CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHC AGKLKLASKPQHFDAIARNFEAVHIEVDPETALLTPSDLKNEIGSPFHGAMLSKKSAMMH CCCEEECCCCHHHHHHHCCCEEEEEEECCCCEEECHHHHHHHHCCCHHHHHHHHHHHHHH MGRYVMGLATAAARHGAIIFERTAVTGHRQGNGRHSLETGRGTVTADHVLVATGAYTPSL HHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEECEEEEEECCCCHHH FGHFRRRIISVGSFLIATRPLSDAEIAATMPGNRTCVTSMNIGNYFRLSPDKRLIFGGRA HHHHHHHHHHHCCHHEEECCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCEEEECCCC RFSATSDQRSDAKSGDILRTSMAEIFPQLAGVEIDYCWGGLVDMTKDRYPRAGYVDGVWY EECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHCCCCCCCCCCCEEE AMGYSGHGAQLSTHLGMMIADAIMGKADRNPVKGLEWPAVPGHFGKPWFLPIVGLYYKTL EECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH DRFM HHCC >Mature Secondary Structure MQFQSYWHDTARPFAEAAQGPVEGHYDVAVIGAGFTGLAAARQLAKAGVKVVVLEAEHVG CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCCC WGASGRNGGHLNNGLAHSFLSAKSALGTERAIALYRAFDDSIDAIEAIIAQEGIDCSFRR CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHC AGKLKLASKPQHFDAIARNFEAVHIEVDPETALLTPSDLKNEIGSPFHGAMLSKKSAMMH CCCEEECCCCHHHHHHHCCCEEEEEEECCCCEEECHHHHHHHHCCCHHHHHHHHHHHHHH MGRYVMGLATAAARHGAIIFERTAVTGHRQGNGRHSLETGRGTVTADHVLVATGAYTPSL HHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEECEEEEEECCCCHHH FGHFRRRIISVGSFLIATRPLSDAEIAATMPGNRTCVTSMNIGNYFRLSPDKRLIFGGRA HHHHHHHHHHHCCHHEEECCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCEEEECCCC RFSATSDQRSDAKSGDILRTSMAEIFPQLAGVEIDYCWGGLVDMTKDRYPRAGYVDGVWY EECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHCCCCCCCCCCCEEE AMGYSGHGAQLSTHLGMMIADAIMGKADRNPVKGLEWPAVPGHFGKPWFLPIVGLYYKTL EECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH DRFM HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]