Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86361067
Identifier: 86361067
GI number: 86361067
Start: 378090
End: 378566
Strand: Reverse
Name: 86361067
Synonym: RHE_PF00337
Alternate gene names: NA
Gene position: 378566-378090 (Counterclockwise)
Preceding gene: 86361071
Following gene: 86361064
Centisome position: 58.92
GC content: 63.31
Gene sequence:
>477_bases TTGCGTTTTCCGCTCCGCCGCCAGTCAAATCTACGGCGGGCGTCCGGGCCTGGCGCCGCGCTGCCCGCGCGCGGAAGCCC GACGCCCGCCAGCTCATGTCACGGTCACGTAGATCTTGCGTACTGTCTCGATGGTCTTCCAGACGCCGATGAAGCCCGGC TTCATGACGAAGCTGTCTCCGGCTTTGTAGACCACCGGTTCTCCGCCTTCCGGTGTGAGTTCGACCAGGCCGGAAAGGAT ATGGCAGAACTCGAATGTCTCGCCCTTGATCGAACGCGTCTCACCGGGCGTCGCCTCCCATATGCCGGTATGGACCGTGT CTGCGCGAGCAACATCCTGCGCCCAGGTCTTGAAGGTGGGGTTGCCCGCGATCAACCGCTCGGGGAGGGGACCGGACTCG CGCGGCGCTTGGGACGGGTTGGTATCGATCGTCTTGAGCAGGGACATGGGTTTCCTTTCCAGGGTGCAGATTTGTAG
Upstream 100 bases:
>100_bases AAGCTGAGTGTCATTGCGTGTCCTCGGCATGAGCTGACGTGAGGCTAGCTGGAGAAAGCGAGCAGCATGCATCGACCGGT ATTGCTGCGACGGACAAAAA
Downstream 100 bases:
>100_bases TGAGATAAATCAGTAGCCGCGGCCGCGATCGACCAGCCCGATCGGGTCGAGGCCCGCCCGGTGCCGTTTGATGTTGCCGA TCACCGCCGCCGCCGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MRFPLRRQSNLRRASGPGAALPARGSPTPASSCHGHVDLAYCLDGLPDADEARLHDEAVSGFVDHRFSAFRCEFDQAGKD MAELECLALDRTRLTGRRLPYAGMDRVCASNILRPGLEGGVARDQPLGEGTGLARRLGRVGIDRLEQGHGFPFQGADL
Sequences:
>Translated_158_residues MRFPLRRQSNLRRASGPGAALPARGSPTPASSCHGHVDLAYCLDGLPDADEARLHDEAVSGFVDHRFSAFRCEFDQAGKD MAELECLALDRTRLTGRRLPYAGMDRVCASNILRPGLEGGVARDQPLGEGTGLARRLGRVGIDRLEQGHGFPFQGADL >Mature_158_residues MRFPLRRQSNLRRASGPGAALPARGSPTPASSCHGHVDLAYCLDGLPDADEARLHDEAVSGFVDHRFSAFRCEFDQAGKD MAELECLALDRTRLTGRRLPYAGMDRVCASNILRPGLEGGVARDQPLGEGTGLARRLGRVGIDRLEQGHGFPFQGADL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17083; Mature: 17083
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFPLRRQSNLRRASGPGAALPARGSPTPASSCHGHVDLAYCLDGLPDADEARLHDEAVS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH GFVDHRFSAFRCEFDQAGKDMAELECLALDRTRLTGRRLPYAGMDRVCASNILRPGLEGG HHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC VARDQPLGEGTGLARRLGRVGIDRLEQGHGFPFQGADL CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRFPLRRQSNLRRASGPGAALPARGSPTPASSCHGHVDLAYCLDGLPDADEARLHDEAVS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH GFVDHRFSAFRCEFDQAGKDMAELECLALDRTRLTGRRLPYAGMDRVCASNILRPGLEGG HHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC VARDQPLGEGTGLARRLGRVGIDRLEQGHGFPFQGADL CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA