Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86361067

Identifier: 86361067

GI number: 86361067

Start: 378090

End: 378566

Strand: Reverse

Name: 86361067

Synonym: RHE_PF00337

Alternate gene names: NA

Gene position: 378566-378090 (Counterclockwise)

Preceding gene: 86361071

Following gene: 86361064

Centisome position: 58.92

GC content: 63.31

Gene sequence:

>477_bases
TTGCGTTTTCCGCTCCGCCGCCAGTCAAATCTACGGCGGGCGTCCGGGCCTGGCGCCGCGCTGCCCGCGCGCGGAAGCCC
GACGCCCGCCAGCTCATGTCACGGTCACGTAGATCTTGCGTACTGTCTCGATGGTCTTCCAGACGCCGATGAAGCCCGGC
TTCATGACGAAGCTGTCTCCGGCTTTGTAGACCACCGGTTCTCCGCCTTCCGGTGTGAGTTCGACCAGGCCGGAAAGGAT
ATGGCAGAACTCGAATGTCTCGCCCTTGATCGAACGCGTCTCACCGGGCGTCGCCTCCCATATGCCGGTATGGACCGTGT
CTGCGCGAGCAACATCCTGCGCCCAGGTCTTGAAGGTGGGGTTGCCCGCGATCAACCGCTCGGGGAGGGGACCGGACTCG
CGCGGCGCTTGGGACGGGTTGGTATCGATCGTCTTGAGCAGGGACATGGGTTTCCTTTCCAGGGTGCAGATTTGTAG

Upstream 100 bases:

>100_bases
AAGCTGAGTGTCATTGCGTGTCCTCGGCATGAGCTGACGTGAGGCTAGCTGGAGAAAGCGAGCAGCATGCATCGACCGGT
ATTGCTGCGACGGACAAAAA

Downstream 100 bases:

>100_bases
TGAGATAAATCAGTAGCCGCGGCCGCGATCGACCAGCCCGATCGGGTCGAGGCCCGCCCGGTGCCGTTTGATGTTGCCGA
TCACCGCCGCCGCCGCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MRFPLRRQSNLRRASGPGAALPARGSPTPASSCHGHVDLAYCLDGLPDADEARLHDEAVSGFVDHRFSAFRCEFDQAGKD
MAELECLALDRTRLTGRRLPYAGMDRVCASNILRPGLEGGVARDQPLGEGTGLARRLGRVGIDRLEQGHGFPFQGADL

Sequences:

>Translated_158_residues
MRFPLRRQSNLRRASGPGAALPARGSPTPASSCHGHVDLAYCLDGLPDADEARLHDEAVSGFVDHRFSAFRCEFDQAGKD
MAELECLALDRTRLTGRRLPYAGMDRVCASNILRPGLEGGVARDQPLGEGTGLARRLGRVGIDRLEQGHGFPFQGADL
>Mature_158_residues
MRFPLRRQSNLRRASGPGAALPARGSPTPASSCHGHVDLAYCLDGLPDADEARLHDEAVSGFVDHRFSAFRCEFDQAGKD
MAELECLALDRTRLTGRRLPYAGMDRVCASNILRPGLEGGVARDQPLGEGTGLARRLGRVGIDRLEQGHGFPFQGADL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17083; Mature: 17083

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFPLRRQSNLRRASGPGAALPARGSPTPASSCHGHVDLAYCLDGLPDADEARLHDEAVS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH
GFVDHRFSAFRCEFDQAGKDMAELECLALDRTRLTGRRLPYAGMDRVCASNILRPGLEGG
HHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
VARDQPLGEGTGLARRLGRVGIDRLEQGHGFPFQGADL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRFPLRRQSNLRRASGPGAALPARGSPTPASSCHGHVDLAYCLDGLPDADEARLHDEAVS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH
GFVDHRFSAFRCEFDQAGKDMAELECLALDRTRLTGRRLPYAGMDRVCASNILRPGLEGG
HHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
VARDQPLGEGTGLARRLGRVGIDRLEQGHGFPFQGADL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA