Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86361072
Identifier: 86361072
GI number: 86361072
Start: 384118
End: 384786
Strand: Reverse
Name: 86361072
Synonym: RHE_PF00342
Alternate gene names: NA
Gene position: 384786-384118 (Counterclockwise)
Preceding gene: 86361073
Following gene: 86361071
Centisome position: 59.89
GC content: 59.64
Gene sequence:
>669_bases ATGACGACGTTCCGCCCGAAATACATCACCTTCGATTGCTACGGCACGCTCACCAACTTCCAGATGGCGGAAGCGGCACG CGATCTCTACGGCGACCAGCTCGACGAACCGCGCATGGCGGAGTTCGTCAAGAATTTCGCCGCCTATCGTCTCGACGAGA TCATGGGCGCCTGGAAACCCTATGCCGAGGTGGTGCACAACTCGCTCGAGCGCACATGCAAGCGCAACGGCGTGACATTT CGCGACGAAGCTGCGCAAATCGTTTACGAGCGCGTTCCGACCTGGGGGCCCCATCGCGACGTAGCCGAGGGTCTTGCCAG GGTTGCCCGGGAAATTCCGCTGGTGATCCTGTCCAATGCCATGGACGCCCAGATCATGTCGAACGTCGAAAAGCTCGGCG CACCCTTCCACGCGGTCTATACCGCTCAGCAGGCCAATGCTTACAAGCCACGTTTCCAGGCTTTCGAATACATGTTCGAC ATGCTCGGCTGCGGGCCTGAGGACGTGCTGCACTGCTCGTCTTCCTTCCGCTACGATCTGATGTCGGCGCACGATCTCGG AATCAAGAACAAGGTCTGGGTCAATCGCGGCCACGAGCCGGCCAATCCCTATTACGGCTATGTCGAAATCGCTGGTATCT CGGGCTTGCCTGGCGTCGTCGGCCTCTGA
Upstream 100 bases:
>100_bases ATAGATTCTGCTTCGGATGCCGCCAATTCAGGTAGGCCAGCGATAAAGCGATGCCTATGATTGTGAAACATCCCGGTTCC AATCATTCAAGGATACGCAG
Downstream 100 bases:
>100_bases CGGAGACAAGCGGATGCAGTTCCAATCCTACTGGCACGACACGGCCCGCCCTTTTGCCGAGGCGGCCCAAGGTCCTGTCG AGGGGCATTACGACGTCGCC
Product: dehalogenase protein
Products: (R)-2-hydroxyacid; halide
Alternate protein names: HAD Family Hydrolase; Hydrolase; Haloalkanoic Acid Dehalogenase; Haloacid Dehalogenase; Dehalogenase; 2-Haloacid Dehalogenase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase I; 2-Haloalkanoic Acid Dehalogenase; Haloacid Dehydrogenase; 2-Haloacid Halidohydrolase Type II; HAD-Superfamily Hydrolase; Haloacid Dehalogenase Type II Truncated; 2-Haloacid Halidohydrolase IVa; 2-Haloacid Halidohydrolase IVA; Dehalogenase Protein; HAD Superfamily Haloalkanoic Acid Dehalogenase
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MTTFRPKYITFDCYGTLTNFQMAEAARDLYGDQLDEPRMAEFVKNFAAYRLDEIMGAWKPYAEVVHNSLERTCKRNGVTF RDEAAQIVYERVPTWGPHRDVAEGLARVAREIPLVILSNAMDAQIMSNVEKLGAPFHAVYTAQQANAYKPRFQAFEYMFD MLGCGPEDVLHCSSSFRYDLMSAHDLGIKNKVWVNRGHEPANPYYGYVEIAGISGLPGVVGL
Sequences:
>Translated_222_residues MTTFRPKYITFDCYGTLTNFQMAEAARDLYGDQLDEPRMAEFVKNFAAYRLDEIMGAWKPYAEVVHNSLERTCKRNGVTF RDEAAQIVYERVPTWGPHRDVAEGLARVAREIPLVILSNAMDAQIMSNVEKLGAPFHAVYTAQQANAYKPRFQAFEYMFD MLGCGPEDVLHCSSSFRYDLMSAHDLGIKNKVWVNRGHEPANPYYGYVEIAGISGLPGVVGL >Mature_221_residues TTFRPKYITFDCYGTLTNFQMAEAARDLYGDQLDEPRMAEFVKNFAAYRLDEIMGAWKPYAEVVHNSLERTCKRNGVTFR DEAAQIVYERVPTWGPHRDVAEGLARVAREIPLVILSNAMDAQIMSNVEKLGAPFHAVYTAQQANAYKPRFQAFEYMFDM LGCGPEDVLHCSSSFRYDLMSAHDLGIKNKVWVNRGHEPANPYYGYVEIAGISGLPGVVGL
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.8.1.2
Molecular weight: Translated: 25093; Mature: 24962
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFRPKYITFDCYGTLTNFQMAEAARDLYGDQLDEPRMAEFVKNFAAYRLDEIMGAWKP CCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH YAEVVHNSLERTCKRNGVTFRDEAAQIVYERVPTWGPHRDVAEGLARVAREIPLVILSNA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHCCCC MDAQIMSNVEKLGAPFHAVYTAQQANAYKPRFQAFEYMFDMLGCGPEDVLHCSSSFRYDL HHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHH MSAHDLGIKNKVWVNRGHEPANPYYGYVEIAGISGLPGVVGL HHHHCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure TTFRPKYITFDCYGTLTNFQMAEAARDLYGDQLDEPRMAEFVKNFAAYRLDEIMGAWKP CCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH YAEVVHNSLERTCKRNGVTFRDEAAQIVYERVPTWGPHRDVAEGLARVAREIPLVILSNA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHCCCC MDAQIMSNVEKLGAPFHAVYTAQQANAYKPRFQAFEYMFDMLGCGPEDVLHCSSSFRYDL HHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHH MSAHDLGIKNKVWVNRGHEPANPYYGYVEIAGISGLPGVVGL HHHHCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: (S)-2-haloacid; H2O
Specific reaction: (S)-2-haloacid + H2O = (R)-2-hydroxyacid + halide
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA