Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
---|---|
Accession | NC_007766 |
Length | 642,517 |
Click here to switch to the map view.
The map label for this gene is catD [H]
Identifier: 86360925
GI number: 86360925
Start: 203240
End: 204049
Strand: Reverse
Name: catD [H]
Synonym: RHE_PF00194
Alternate gene names: 86360925
Gene position: 204049-203240 (Counterclockwise)
Preceding gene: 86360926
Following gene: 86360924
Centisome position: 31.76
GC content: 65.8
Gene sequence:
>810_bases ATGGCAGAGGCACAGCGCTATACCGTCGGAGACGTGACGCTCAACTACCGGATCGACGGTAGCGGCGAGCCTCTGGTCTG CATTCACGGCGTCGGCTCCTATCTGGAGGCTTGGTCGGGTGTGGTCGAGCGCCTGAAGGACAGCTTCACGATCCTGACCT TCGACCTCCGTGGCCACGGCCAATCGAGCCGGGTGAAGGGCCGCTACGAGATCGACGATTTCGTCAACGAGGCTCTGGCG CTCGCCGACAAGGCAGGCTTCTCGACCTTCAATCTCGCCGGCTTCTCGCTCGGCGGGCTGATCGCCCAGCGCCTGGCGCT GACCCACCTCGACCGGCTGCGCAAGCTGGTGCTGCTCTCCACGGTGGCCGGCCGCACGCCGGATGAGCGCACGCGGGTTC TGGAGCGCCTCGCGGCGCTGCGGGCCGGTACGCCCGCCGATCACCACAACGCCTCGCTGTCGCGCTGGCTGACCGAAGAA TTTCAGGAGAACAACCCCGCGGTGATCGCGCGGCTTCGTGAGCGCGATGCGGAGAATGATCCGGACTGTTACGCCGCCGC CTACCGGGTGCTGGCGGAGACGGATTTCGGCGGCTTCCTCGACCAGATCCGCTGCCCCACGCTGATTGCAACGGGCGAGG AGGATGCCGGATCCAATCCACGCATGGCCCGCTACATGCACGAGCGCATCCCGGGCTCGACGCTCAGCATCCTGCCCGGA TTGCGCCACTCCATCCTGATCGAGGCGCCGGAAACGGTTGCGAATTTGATCCACGGCTTCCTGACTCGCGAGGAGACGAA CCATGGATGA
Upstream 100 bases:
>100_bases GAGCTGCAGAAGCGGACGATCGAGCTGTTCGTCGAGGAAATCATGCCCTTCTTCGCCGCGCGCGAAAAGGACAAGCAGCG CAAGGCGGCGGCAGGCTGAC
Downstream 100 bases:
>100_bases GGCGCTCAGAAAGAGCGGCGAGGCCGTTAGGCGCAAGGTTCTGGGCGACGACTATGTCGATCGCGCCATCAGCGGTGCCG ACGGTTTCTCGGCACCTTTC
Product: 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MAEAQRYTVGDVTLNYRIDGSGEPLVCIHGVGSYLEAWSGVVERLKDSFTILTFDLRGHGQSSRVKGRYEIDDFVNEALA LADKAGFSTFNLAGFSLGGLIAQRLALTHLDRLRKLVLLSTVAGRTPDERTRVLERLAALRAGTPADHHNASLSRWLTEE FQENNPAVIARLRERDAENDPDCYAAAYRVLAETDFGGFLDQIRCPTLIATGEEDAGSNPRMARYMHERIPGSTLSILPG LRHSILIEAPETVANLIHGFLTREETNHG
Sequences:
>Translated_269_residues MAEAQRYTVGDVTLNYRIDGSGEPLVCIHGVGSYLEAWSGVVERLKDSFTILTFDLRGHGQSSRVKGRYEIDDFVNEALA LADKAGFSTFNLAGFSLGGLIAQRLALTHLDRLRKLVLLSTVAGRTPDERTRVLERLAALRAGTPADHHNASLSRWLTEE FQENNPAVIARLRERDAENDPDCYAAAYRVLAETDFGGFLDQIRCPTLIATGEEDAGSNPRMARYMHERIPGSTLSILPG LRHSILIEAPETVANLIHGFLTREETNHG >Mature_268_residues AEAQRYTVGDVTLNYRIDGSGEPLVCIHGVGSYLEAWSGVVERLKDSFTILTFDLRGHGQSSRVKGRYEIDDFVNEALAL ADKAGFSTFNLAGFSLGGLIAQRLALTHLDRLRKLVLLSTVAGRTPDERTRVLERLAALRAGTPADHHNASLSRWLTEEF QENNPAVIARLRERDAENDPDCYAAAYRVLAETDFGGFLDQIRCPTLIATGEEDAGSNPRMARYMHERIPGSTLSILPGL RHSILIEAPETVANLIHGFLTREETNHG
Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 29687; Mature: 29556
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEAQRYTVGDVTLNYRIDGSGEPLVCIHGVGSYLEAWSGVVERLKDSFTILTFDLRGHG CCCCCCEEECCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEEEEEECCCC QSSRVKGRYEIDDFVNEALALADKAGFSTFNLAGFSLGGLIAQRLALTHLDRLRKLVLLS CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH TVAGRTPDERTRVLERLAALRAGTPADHHNASLSRWLTEEFQENNPAVIARLRERDAEND HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC PDCYAAAYRVLAETDFGGFLDQIRCPTLIATGEEDAGSNPRMARYMHERIPGSTLSILPG CHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHCC LRHSILIEAPETVANLIHGFLTREETNHG CCHHEEEECHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AEAQRYTVGDVTLNYRIDGSGEPLVCIHGVGSYLEAWSGVVERLKDSFTILTFDLRGHG CCCCCEEECCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEEEEEECCCC QSSRVKGRYEIDDFVNEALALADKAGFSTFNLAGFSLGGLIAQRLALTHLDRLRKLVLLS CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH TVAGRTPDERTRVLERLAALRAGTPADHHNASLSRWLTEEFQENNPAVIARLRERDAEND HHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC PDCYAAAYRVLAETDFGGFLDQIRCPTLIATGEEDAGSNPRMARYMHERIPGSTLSILPG CHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHCC LRHSILIEAPETVANLIHGFLTREETNHG CCHHEEEECHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]