Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is yhbW [C]

Identifier: 86360926

GI number: 86360926

Start: 204051

End: 205127

Strand: Reverse

Name: yhbW [C]

Synonym: RHE_PF00195

Alternate gene names: 86360926

Gene position: 205127-204051 (Counterclockwise)

Preceding gene: 86360927

Following gene: 86360925

Centisome position: 31.93

GC content: 62.58

Gene sequence:

>1077_bases
ATGAAATTCGCAGTATCGCTGACCATGGAGCGCTTCTCGTCCGACATTCCGATGTCGACGGTCAAGAACAATCTCCTGCA
ATTGGCACGGATGGCCGACGAAGGCGGTTTCGAGGCGCTGTGGACCGCCGAGCACCACACGATCGAATGCACGATCTCTC
CCAATCCGTTCCAGACGCTGGTCTGGCTGGCGCAGCACACGCAGCAGATCCGCCTGGGCACCTCGACGCTGGTTGCGCCC
TACTGGACCCCGATCCGTCTCGCCGGTGAATCCGCGCTCTGCGATCATCTGACCAACGGCCGCCTGGAATTCGGCATCGC
CCGCGGCTCGTACCAGTATGAGTTCGACCGGATGGCCGGCGGCATGCCGCAGCAGGAAGGCGTCGCCTACATGAAGGAGA
TCGTCCCGGCTGTGAAGAAGCTCTGGGCCGGCGACTACGCCCATGACGGGCACTACTGGAAATTCCCGACCGCCACGTCT
GTGCCGAAGCCGCTTCAGCAGCCGCATCCGCCGATCTGGGTCGCGGCCCGCGATGCCGGCTCCTTCGACTGGGCGATCGC
CAATGGCGCCAGCATCCTCTCCACGCCGCTCTCGCAGCCGGCAGCCGAGATCCAGGTCCTCGCCGACAAGTTCAACAAGG
CGGTTGCCGATCATCCCGAGGTACCGCGCCCGCGCTTCATGATGCAGCGCCGCACCTGCGTCTACGACAAGGCTGACGGC
TGGGAACTGGCGGTCAGGCACAGCATGGACTACGGCCGCGCCTTCGAAAATCTGATGCAGAATATCGGCATGGTGCGCGA
AGGCTTTCCGGAGGCTGTGCCCTACGATGCGGTGAAGGGCAAGGACAACTACAATCCGGACAATATCCGCAGGAATCTGA
TGTTCGGCACGCCCGACGAGGCGATCGAGAAGCTGCTGGTCTATGAAGAAGCCGGTGTTGATCAGTACTGTCTCGGCCTG
ACCTTCAACCTGCCCTTCGAGCTGCAGAAGCGGACGATCGAGCTGTTCGTCGAGGAAATCATGCCCTTCTTCGCCGCGCG
CGAAAAGGACAAGCAGCGCAAGGCGGCGGCAGGCTGA

Upstream 100 bases:

>100_bases
GAACGTCATCATCGATTATTCCGGGGCGATGCAGGACCCGTTCGTCATCCGTCTGAAGTGACGGCACGCACAAAACTGAA
CCCGAAAGGGAGGCAAGCAG

Downstream 100 bases:

>100_bases
CATGGCAGAGGCACAGCGCTATACCGTCGGAGACGTGACGCTCAACTACCGGATCGACGGTAGCGGCGAGCCTCTGGTCT
GCATTCACGGCGTCGGCTCC

Product: putative oxidoreductase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKFAVSLTMERFSSDIPMSTVKNNLLQLARMADEGGFEALWTAEHHTIECTISPNPFQTLVWLAQHTQQIRLGTSTLVAP
YWTPIRLAGESALCDHLTNGRLEFGIARGSYQYEFDRMAGGMPQQEGVAYMKEIVPAVKKLWAGDYAHDGHYWKFPTATS
VPKPLQQPHPPIWVAARDAGSFDWAIANGASILSTPLSQPAAEIQVLADKFNKAVADHPEVPRPRFMMQRRTCVYDKADG
WELAVRHSMDYGRAFENLMQNIGMVREGFPEAVPYDAVKGKDNYNPDNIRRNLMFGTPDEAIEKLLVYEEAGVDQYCLGL
TFNLPFELQKRTIELFVEEIMPFFAAREKDKQRKAAAG

Sequences:

>Translated_358_residues
MKFAVSLTMERFSSDIPMSTVKNNLLQLARMADEGGFEALWTAEHHTIECTISPNPFQTLVWLAQHTQQIRLGTSTLVAP
YWTPIRLAGESALCDHLTNGRLEFGIARGSYQYEFDRMAGGMPQQEGVAYMKEIVPAVKKLWAGDYAHDGHYWKFPTATS
VPKPLQQPHPPIWVAARDAGSFDWAIANGASILSTPLSQPAAEIQVLADKFNKAVADHPEVPRPRFMMQRRTCVYDKADG
WELAVRHSMDYGRAFENLMQNIGMVREGFPEAVPYDAVKGKDNYNPDNIRRNLMFGTPDEAIEKLLVYEEAGVDQYCLGL
TFNLPFELQKRTIELFVEEIMPFFAAREKDKQRKAAAG
>Mature_358_residues
MKFAVSLTMERFSSDIPMSTVKNNLLQLARMADEGGFEALWTAEHHTIECTISPNPFQTLVWLAQHTQQIRLGTSTLVAP
YWTPIRLAGESALCDHLTNGRLEFGIARGSYQYEFDRMAGGMPQQEGVAYMKEIVPAVKKLWAGDYAHDGHYWKFPTATS
VPKPLQQPHPPIWVAARDAGSFDWAIANGASILSTPLSQPAAEIQVLADKFNKAVADHPEVPRPRFMMQRRTCVYDKADG
WELAVRHSMDYGRAFENLMQNIGMVREGFPEAVPYDAVKGKDNYNPDNIRRNLMFGTPDEAIEKLLVYEEAGVDQYCLGL
TFNLPFELQKRTIELFVEEIMPFFAAREKDKQRKAAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 40393; Mature: 40393

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAVSLTMERFSSDIPMSTVKNNLLQLARMADEGGFEALWTAEHHTIECTISPNPFQTL
CEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCHHHHH
VWLAQHTQQIRLGTSTLVAPYWTPIRLAGESALCDHLTNGRLEFGIARGSYQYEFDRMAG
HHHHHHHHHHCCCCCEEECCCCCCEEECCCHHHHHHHCCCCEEEEEECCCCEEEHHHHCC
GMPQQEGVAYMKEIVPAVKKLWAGDYAHDGHYWKFPTATSVPKPLQQPHPPIWVAARDAG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHCCCCCCEEEEECCCC
SFDWAIANGASILSTPLSQPAAEIQVLADKFNKAVADHPEVPRPRFMMQRRTCVYDKADG
CCCEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCCC
WELAVRHSMDYGRAFENLMQNIGMVREGFPEAVPYDAVKGKDNYNPDNIRRNLMFGTPDE
CEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHH
AIEKLLVYEEAGVDQYCLGLTFNLPFELQKRTIELFVEEIMPFFAAREKDKQRKAAAG
HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKFAVSLTMERFSSDIPMSTVKNNLLQLARMADEGGFEALWTAEHHTIECTISPNPFQTL
CEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCHHHHH
VWLAQHTQQIRLGTSTLVAPYWTPIRLAGESALCDHLTNGRLEFGIARGSYQYEFDRMAG
HHHHHHHHHHCCCCCEEECCCCCCEEECCCHHHHHHHCCCCEEEEEECCCCEEEHHHHCC
GMPQQEGVAYMKEIVPAVKKLWAGDYAHDGHYWKFPTATSVPKPLQQPHPPIWVAARDAG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHCCCCCCEEEEECCCC
SFDWAIANGASILSTPLSQPAAEIQVLADKFNKAVADHPEVPRPRFMMQRRTCVYDKADG
CCCEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCCC
WELAVRHSMDYGRAFENLMQNIGMVREGFPEAVPYDAVKGKDNYNPDNIRRNLMFGTPDE
CEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHH
AIEKLLVYEEAGVDQYCLGLTFNLPFELQKRTIELFVEEIMPFFAAREKDKQRKAAAG
HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424; 8796346 [H]