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The map label for this gene is pcaCf

Identifier: 86360924

GI number: 86360924

Start: 202858

End: 203247

Strand: Reverse

Name: pcaCf

Synonym: RHE_PF00193

Alternate gene names: 86360924

Gene position: 203247-202858 (Counterclockwise)

Preceding gene: 86360925

Following gene: 86360923

Centisome position: 31.63

GC content: 61.03

Gene sequence:

>390_bases
ATGGATGAGGCGCTCAGAAAGAGCGGCGAGGCCGTTAGGCGCAAGGTTCTGGGCGACGACTATGTCGATCGCGCCATCAG
CGGTGCCGACGGTTTCTCGGCACCTTTCCAGGACGTTCTCAACGAATATTGCTGGGGTGCGGCCTGGACCGACGAAGGGC
TCGATCTCAAGCAGCGTAGCCTTCTCAATCTCGGCATGCTGGCGGCGCTCAACCGCATGCATGAATTCGGCATCCACTTT
CGCGGCGCCATTCGCAACGGGCTGACGGACGACGAATTGCGGGCCGCTCTCGTGCAAATCGCAGTCTATTGCGGCATTCC
CGCCGGCGTAGAAGCCTTCCGGGTTGCCCGCTCCATTCGCGACGAGATGCGCCAGAAAGGAGAGTTCTGA

Upstream 100 bases:

>100_bases
CTCAGCATCCTGCCCGGATTGCGCCACTCCATCCTGATCGAGGCGCCGGAAACGGTTGCGAATTTGATCCACGGCTTCCT
GACTCGCGAGGAGACGAACC

Downstream 100 bases:

>100_bases
CTTCCCCGGTTTGAAGGAACGAGCGGTCTGCCGCTGCTTCCGATCGCCGGAAGACGAAAAGTCTCTTCGACTGCAAGATT
GCATGACGGTACGGGAATGA

Product: gamma-carboxymuconolactone decarboxylase protein

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MDEALRKSGEAVRRKVLGDDYVDRAISGADGFSAPFQDVLNEYCWGAAWTDEGLDLKQRSLLNLGMLAALNRMHEFGIHF
RGAIRNGLTDDELRAALVQIAVYCGIPAGVEAFRVARSIRDEMRQKGEF

Sequences:

>Translated_129_residues
MDEALRKSGEAVRRKVLGDDYVDRAISGADGFSAPFQDVLNEYCWGAAWTDEGLDLKQRSLLNLGMLAALNRMHEFGIHF
RGAIRNGLTDDELRAALVQIAVYCGIPAGVEAFRVARSIRDEMRQKGEF
>Mature_129_residues
MDEALRKSGEAVRRKVLGDDYVDRAISGADGFSAPFQDVLNEYCWGAAWTDEGLDLKQRSLLNLGMLAALNRMHEFGIHF
RGAIRNGLTDDELRAALVQIAVYCGIPAGVEAFRVARSIRDEMRQKGEF

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 14362; Mature: 14362

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEALRKSGEAVRRKVLGDDYVDRAISGADGFSAPFQDVLNEYCWGAAWTDEGLDLKQRS
CCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHH
LLNLGMLAALNRMHEFGIHFRGAIRNGLTDDELRAALVQIAVYCGIPAGVEAFRVARSIR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DEMRQKGEF
HHHHHCCCC
>Mature Secondary Structure
MDEALRKSGEAVRRKVLGDDYVDRAISGADGFSAPFQDVLNEYCWGAAWTDEGLDLKQRS
CCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHH
LLNLGMLAALNRMHEFGIHFRGAIRNGLTDDELRAALVQIAVYCGIPAGVEAFRVARSIR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DEMRQKGEF
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]