Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
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Accession | NC_007766 |
Length | 642,517 |
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The map label for this gene is 86360852
Identifier: 86360852
GI number: 86360852
Start: 126522
End: 126887
Strand: Reverse
Name: 86360852
Synonym: RHE_PF00119
Alternate gene names: NA
Gene position: 126887-126522 (Counterclockwise)
Preceding gene: 86360853
Following gene: 86360850
Centisome position: 19.75
GC content: 54.37
Gene sequence:
>366_bases TTGCCTCAGCTCGAAAAGCCGGCATCTACCTCCGATACTTTCCGATGGAAACGAAAAAGGACACCGGCGGGCGTGACATT TGCAACGGCCGAGATCATGATCTTTTTTCCAGCCGCTCAGGACGTCGCCTCACCATTCATCCGCGCGTCGAAACTAACCT TCGTAACGAAGGCTGATCGTTTTCGTCGCTTGGCGCGCGGCTATCTCTTATGTCCGCCCGTGTCGAAGCCACTCGGTGTC GGTAATACCGCGCGCCGAGAAGGTCAAACGCGACGCCGGTGTACTTCAGTTTTTCGGAGGCTTAAACGAGATGCTGTTGA TGAAAGCCTTTGGCGTTGTATTCGGACTGAGATCTTCCTGGCATGA
Upstream 100 bases:
>100_bases CTCGAAGAGGCGTGGAGAGGGAAAGTCATCAGGTTTTCCTCAACGGCACCTGGGTGCCTAAACCTTCAGACCCTGCTCGC TTGGTCAAGGCTGTGAATGA
Downstream 100 bases:
>100_bases ACCAGACCGGCTTCGGTCTGGTTAGCGCGATGATATAGGGAGCCTCGGTTCTGCTCGGTGTTCCACCATCGTCGCCGCGT TGTGGGCTAACGGAGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MPQLEKPASTSDTFRWKRKRTPAGVTFATAEIMIFFPAAQDVASPFIRASKLTFVTKADRFRRLARGYLLCPPVSKPLGV GNTARREGQTRRRCTSVFRRLKRDAVDESLWRCIRTEIFLA
Sequences:
>Translated_121_residues MPQLEKPASTSDTFRWKRKRTPAGVTFATAEIMIFFPAAQDVASPFIRASKLTFVTKADRFRRLARGYLLCPPVSKPLGV GNTARREGQTRRRCTSVFRRLKRDAVDESLWRCIRTEIFLA >Mature_120_residues PQLEKPASTSDTFRWKRKRTPAGVTFATAEIMIFFPAAQDVASPFIRASKLTFVTKADRFRRLARGYLLCPPVSKPLGVG NTARREGQTRRRCTSVFRRLKRDAVDESLWRCIRTEIFLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13864; Mature: 13733
Theoretical pI: Translated: 11.89; Mature: 11.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQLEKPASTSDTFRWKRKRTPAGVTFATAEIMIFFPAAQDVASPFIRASKLTFVTKADR CCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH FRRLARGYLLCPPVSKPLGVGNTARREGQTRRRCTSVFRRLKRDAVDESLWRCIRTEIFL HHHHHCCCEECCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC A C >Mature Secondary Structure PQLEKPASTSDTFRWKRKRTPAGVTFATAEIMIFFPAAQDVASPFIRASKLTFVTKADR CCCCCCCCCCCHHHHHHCCCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH FRRLARGYLLCPPVSKPLGVGNTARREGQTRRRCTSVFRRLKRDAVDESLWRCIRTEIFL HHHHHCCCEECCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA