Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86360853

Identifier: 86360853

GI number: 86360853

Start: 126812

End: 127231

Strand: Reverse

Name: 86360853

Synonym: RHE_PF00120

Alternate gene names: NA

Gene position: 127231-126812 (Counterclockwise)

Preceding gene: 86360856

Following gene: 86360852

Centisome position: 19.8

GC content: 54.52

Gene sequence:

>420_bases
ATGCGTACTCCGGCTATTCTGCTTCTGGAAGACGAAGCGCTGATTGCGATGGATGTCGAGAGAACGCTTGACGATGCTCA
GGCAGGAACTTCGACTAGTCTTGCATCCTGCGCTGCCGCGCTTGCATGGCTGGCAGATTATACTCCCGATGCGGCGATCA
TTGACATTTTCCTGCGAGATGGCGAGTGCATTGAGGTTGCTGAGATACTCGTAGCACGGGGTGTTCCATTTGTCGTCCAC
AGTGCTCGAAGAGGCGTGGAGAGGGAAAGTCATCAGGTTTTCCTCAACGGCACCTGGGTGCCTAAACCTTCAGACCCTGC
TCGCTTGGTCAAGGCTGTGAATGATTGCCTCAGCTCGAAAAGCCGGCATCTACCTCCGATACTTTCCGATGGAAACGAAA
AAGGACACCGGCGGGCGTGA

Upstream 100 bases:

>100_bases
TGCAGATCCCTTCTCTGATGGTCCGTTTCCTGACGGATCAGGACGTACCCTGGGATGGGGTGTATAACTATCGTAACTTC
CTCCACAACAGGTGCCGCCA

Downstream 100 bases:

>100_bases
CATTTGCAACGGCCGAGATCATGATCTTTTTTCCAGCCGCTCAGGACGTCGCCTCACCATTCATCCGCGCGTCGAAACTA
ACCTTCGTAACGAAGGCTGA

Product: putative two-component response regulator protein

Products: NA

Alternate protein names: Response Regulator Receiver And SARP Domain Protein; Response Regulator Receiver Protein

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MRTPAILLLEDEALIAMDVERTLDDAQAGTSTSLASCAAALAWLADYTPDAAIIDIFLRDGECIEVAEILVARGVPFVVH
SARRGVERESHQVFLNGTWVPKPSDPARLVKAVNDCLSSKSRHLPPILSDGNEKGHRRA

Sequences:

>Translated_139_residues
MRTPAILLLEDEALIAMDVERTLDDAQAGTSTSLASCAAALAWLADYTPDAAIIDIFLRDGECIEVAEILVARGVPFVVH
SARRGVERESHQVFLNGTWVPKPSDPARLVKAVNDCLSSKSRHLPPILSDGNEKGHRRA
>Mature_139_residues
MRTPAILLLEDEALIAMDVERTLDDAQAGTSTSLASCAAALAWLADYTPDAAIIDIFLRDGECIEVAEILVARGVPFVVH
SARRGVERESHQVFLNGTWVPKPSDPARLVKAVNDCLSSKSRHLPPILSDGNEKGHRRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15070; Mature: 15070

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPAILLLEDEALIAMDVERTLDDAQAGTSTSLASCAAALAWLADYTPDAAIIDIFLRD
CCCCEEEEEECCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECC
GECIEVAEILVARGVPFVVHSARRGVERESHQVFLNGTWVPKPSDPARLVKAVNDCLSSK
CCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEECCEECCCCCCHHHHHHHHHHHHHCC
SRHLPPILSDGNEKGHRRA
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTPAILLLEDEALIAMDVERTLDDAQAGTSTSLASCAAALAWLADYTPDAAIIDIFLRD
CCCCEEEEEECCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECC
GECIEVAEILVARGVPFVVHSARRGVERESHQVFLNGTWVPKPSDPARLVKAVNDCLSSK
CCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEECCEECCCCCCHHHHHHHHHHHHHCC
SRHLPPILSDGNEKGHRRA
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA