Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86360850

Identifier: 86360850

GI number: 86360850

Start: 124175

End: 125047

Strand: Reverse

Name: 86360850

Synonym: RHE_PF00117

Alternate gene names: NA

Gene position: 125047-124175 (Counterclockwise)

Preceding gene: 86360852

Following gene: 86360846

Centisome position: 19.46

GC content: 57.04

Gene sequence:

>873_bases
GTGCTCCCATCTTCCACCGTTGCCCTCGCCGAAACGCTATCGGCGAAACTTCCAGACGATTTCTCTCGGAAGGTCCTAGC
CGGGTCACTCGGAGCTTCCTGGGACAGCGCTAACCCGATCCGCGCCAATCTCTTTGCAGCTGGCCTGCGCGAACTGGTGA
CCTATGTCCTGCATAGTCTGGCGCCTGACGAACTCGTCAAGGCCTGTGGGTGGTACCAGGACCAGCGGCCCAGACGTGAA
GCGGATGCAAAGAAGAGAGGGGCCGCTTATCAAGATAGGCCGACCCGCATCGACCGAATGGTCTATGCGACGCAAGGGGG
ATTGTCCGATGACTTCCTCGAAAAAATCGGCCTCGATGTGGACGCAGACCATAGGACCCTTCGCGAGATGGTCGACGAGC
TTTCGAAATACACCCATATGCGTCCCGGCTCGCTCGTTGAAGGCGATCAAGCCGTTAGCGCTTTCATGGAAGCCGCTATT
CACGCCGTGCTTCGCTTTCACAAGGCCATCGAAACGGTGCGGAGCGCAGTGATCGACCTCGTCACCGAGGATATCAATAA
GGAAGCAGACGCAAAACTAACCGAGACAATCGTTCAGGAACTGGATGAGCTCTCGACGCACACCACCGTCGAGGAGGTCG
TCGCCGACGAAATTCGGGTGACAGTACTCGGTCCCAGGGAGATCGAGTTCTACGTCAAGGGAACCGTGTACGTTCAGCTG
AACTACGGCTCTTCATCAGACTTCAGACGCGGTGATGGCGCATCGATGAGCGATAAATACCCCTTTTCGGTACGCATGGG
CGCCGCGATGTCCGACTTTATACCGTACGCGCTCGAGGCCGTCTCGGTCGATAACAGCAGTTTTTACGAGTAG

Upstream 100 bases:

>100_bases
GAGCTCTTTTCGCTATTACGTCGAAGGCTTGTGACGGAACATCGTCGACGCTAAAGACGCTATCTTTTCTATGTTTGTAT
TCACGCGAGGAACCAGCCAC

Downstream 100 bases:

>100_bases
GTGCCGACGTTCAGCAACGCCTGCGTTCGACCGGCCCCTTGACCGGATATTTTGGCCGGTGGAATCCGGTCATCCGGAAT
CGTCGCGCCTCCGCAAGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MLPSSTVALAETLSAKLPDDFSRKVLAGSLGASWDSANPIRANLFAAGLRELVTYVLHSLAPDELVKACGWYQDQRPRRE
ADAKKRGAAYQDRPTRIDRMVYATQGGLSDDFLEKIGLDVDADHRTLREMVDELSKYTHMRPGSLVEGDQAVSAFMEAAI
HAVLRFHKAIETVRSAVIDLVTEDINKEADAKLTETIVQELDELSTHTTVEEVVADEIRVTVLGPREIEFYVKGTVYVQL
NYGSSSDFRRGDGASMSDKYPFSVRMGAAMSDFIPYALEAVSVDNSSFYE

Sequences:

>Translated_290_residues
MLPSSTVALAETLSAKLPDDFSRKVLAGSLGASWDSANPIRANLFAAGLRELVTYVLHSLAPDELVKACGWYQDQRPRRE
ADAKKRGAAYQDRPTRIDRMVYATQGGLSDDFLEKIGLDVDADHRTLREMVDELSKYTHMRPGSLVEGDQAVSAFMEAAI
HAVLRFHKAIETVRSAVIDLVTEDINKEADAKLTETIVQELDELSTHTTVEEVVADEIRVTVLGPREIEFYVKGTVYVQL
NYGSSSDFRRGDGASMSDKYPFSVRMGAAMSDFIPYALEAVSVDNSSFYE
>Mature_290_residues
MLPSSTVALAETLSAKLPDDFSRKVLAGSLGASWDSANPIRANLFAAGLRELVTYVLHSLAPDELVKACGWYQDQRPRRE
ADAKKRGAAYQDRPTRIDRMVYATQGGLSDDFLEKIGLDVDADHRTLREMVDELSKYTHMRPGSLVEGDQAVSAFMEAAI
HAVLRFHKAIETVRSAVIDLVTEDINKEADAKLTETIVQELDELSTHTTVEEVVADEIRVTVLGPREIEFYVKGTVYVQL
NYGSSSDFRRGDGASMSDKYPFSVRMGAAMSDFIPYALEAVSVDNSSFYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32110; Mature: 32110

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPSSTVALAETLSAKLPDDFSRKVLAGSLGASWDSANPIRANLFAAGLRELVTYVLHSL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
APDELVKACGWYQDQRPRREADAKKRGAAYQDRPTRIDRMVYATQGGLSDDFLEKIGLDV
CHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCC
DADHRTLREMVDELSKYTHMRPGSLVEGDQAVSAFMEAAIHAVLRFHKAIETVRSAVIDL
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTEDINKEADAKLTETIVQELDELSTHTTVEEVVADEIRVTVLGPREIEFYVKGTVYVQL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEEEEEEEE
NYGSSSDFRRGDGASMSDKYPFSVRMGAAMSDFIPYALEAVSVDNSSFYE
ECCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLPSSTVALAETLSAKLPDDFSRKVLAGSLGASWDSANPIRANLFAAGLRELVTYVLHSL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
APDELVKACGWYQDQRPRREADAKKRGAAYQDRPTRIDRMVYATQGGLSDDFLEKIGLDV
CHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCC
DADHRTLREMVDELSKYTHMRPGSLVEGDQAVSAFMEAAIHAVLRFHKAIETVRSAVIDL
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTEDINKEADAKLTETIVQELDELSTHTTVEEVVADEIRVTVLGPREIEFYVKGTVYVQL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEEEEEEEE
NYGSSSDFRRGDGASMSDKYPFSVRMGAAMSDFIPYALEAVSVDNSSFYE
ECCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA