Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
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Accession | NC_007759 |
Length | 3,179,300 |
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The map label for this gene is 85860187
Identifier: 85860187
GI number: 85860187
Start: 2389083
End: 2389244
Strand: Direct
Name: 85860187
Synonym: SYN_03728
Alternate gene names: NA
Gene position: 2389083-2389244 (Clockwise)
Preceding gene: 85860184
Following gene: 85860188
Centisome position: 75.14
GC content: 54.32
Gene sequence:
>162_bases TTGACCGCCGCCGATTTTCGCGGCCTGCCGCTTCCTCTCAGCTCGATCTTCACTTCCCGGATCAAGGCAATCTTTCCGGT TCTGTTCGCCGCGGTTTTTTGCCACGTAACCTGCCTCAGCATTCCTGAACTTCAACAGCGCTGCCCTATATCATATTGGT GA
Upstream 100 bases:
>100_bases GGAATCACCCGGAGTTTTTTCACTTGAACGCCGTCAATCATCGTTTCTCTCCTTAAAGCCTTCCCCTGTATCCGGTCTCT CTGCCTTTCGTTCACAGGCT
Downstream 100 bases:
>100_bases TTCCTCAACAATAAAAACTCTGAATCCTTGACTTCATCGGCGGGTTAGCCTATAAAACTGAGGAAAATCAACGGGACATA AGATTTTGTTATGTCGTGCG
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 52
Protein sequence:
>53_residues MTAADFRGLPLPLSSIFTSRIKAIFPVLFAAVFCHVTCLSIPELQQRCPISYW
Sequences:
>Translated_53_residues MTAADFRGLPLPLSSIFTSRIKAIFPVLFAAVFCHVTCLSIPELQQRCPISYW >Mature_52_residues TAADFRGLPLPLSSIFTSRIKAIFPVLFAAVFCHVTCLSIPELQQRCPISYW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5957; Mature: 5826
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAADFRGLPLPLSSIFTSRIKAIFPVLFAAVFCHVTCLSIPELQQRCPISYW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC >Mature Secondary Structure TAADFRGLPLPLSSIFTSRIKAIFPVLFAAVFCHVTCLSIPELQQRCPISYW CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA