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The map label for this gene is csoR [H]

Identifier: 85859983

GI number: 85859983

Start: 2206626

End: 2207021

Strand: Direct

Name: csoR [H]

Synonym: SYN_00719

Alternate gene names: 85859983

Gene position: 2206626-2207021 (Clockwise)

Preceding gene: 85859979

Following gene: 85859984

Centisome position: 69.41

GC content: 41.16

Gene sequence:

>396_bases
GTGTGCGGAAGCTCAGTTACATTTTATAAGCATAGGCTTATAATAAAGCTCAAGTACAATAAAAATCTTTGGCCGTTAAA
TATATTGACACACAGAAAGGAAAGCCCTATACATACCCCATGGGGGTATATTATGAGTCAGGAAAGAAAAAAAATTATTG
GCCGTTTGCGAAGGATTGAAGGGCAAATTCGGGGACTTCAGAGGATGGTTGAAAGCGAAGCACCCTGCGTAGATATTCTC
ACACAGGTCTCAGCTGTTACTTCTGCCATGAAAAAAACGGGGAATGAAATTGTCCAGAACCACTTGCAGCAATGTATTTC
CGAAACCTCTCAGGGAAACGATGAGGCACTGGAAAATTTTAAGAAAGCTTTAGCCCGATATATCCGCATGGCATAA

Upstream 100 bases:

>100_bases
TTCACAGGAGTAAACTATTTATAACATATTGTAATTAATAATTTTATGGCGGAATAACACCGTTTATCGTTCAAGAATAA
AGATATAGGCTCAATCAAAT

Downstream 100 bases:

>100_bases
AGAAGGAGTAAAAGATGGAAGCGGAAAAAATATCAAAGATCAGTCGTCGTTCCCTCCTGAAGGCATCTACTGGGGCATTG
GCCATTCCGGGCTTAGCATT

Product: cytoplasmic protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MCGSSVTFYKHRLIIKLKYNKNLWPLNILTHRKESPIHTPWGYIMSQERKKIIGRLRRIEGQIRGLQRMVESEAPCVDIL
TQVSAVTSAMKKTGNEIVQNHLQQCISETSQGNDEALENFKKALARYIRMA

Sequences:

>Translated_131_residues
MCGSSVTFYKHRLIIKLKYNKNLWPLNILTHRKESPIHTPWGYIMSQERKKIIGRLRRIEGQIRGLQRMVESEAPCVDIL
TQVSAVTSAMKKTGNEIVQNHLQQCISETSQGNDEALENFKKALARYIRMA
>Mature_131_residues
MCGSSVTFYKHRLIIKLKYNKNLWPLNILTHRKESPIHTPWGYIMSQERKKIIGRLRRIEGQIRGLQRMVESEAPCVDIL
TQVSAVTSAMKKTGNEIVQNHLQQCISETSQGNDEALENFKKALARYIRMA

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 15127; Mature: 15127

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGSSVTFYKHRLIIKLKYNKNLWPLNILTHRKESPIHTPWGYIMSQERKKIIGRLRRIE
CCCCCHHHHHHEEEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GQIRGLQRMVESEAPCVDILTQVSAVTSAMKKTGNEIVQNHLQQCISETSQGNDEALENF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KKALARYIRMA
HHHHHHHHHCC
>Mature Secondary Structure
MCGSSVTFYKHRLIIKLKYNKNLWPLNILTHRKESPIHTPWGYIMSQERKKIIGRLRRIE
CCCCCHHHHHHEEEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GQIRGLQRMVESEAPCVDILTQVSAVTSAMKKTGNEIVQNHLQQCISETSQGNDEALENF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KKALARYIRMA
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]