Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85859979

Identifier: 85859979

GI number: 85859979

Start: 2204296

End: 2204478

Strand: Direct

Name: 85859979

Synonym: SYN_03105

Alternate gene names: NA

Gene position: 2204296-2204478 (Clockwise)

Preceding gene: 85859978

Following gene: 85859983

Centisome position: 69.33

GC content: 39.89

Gene sequence:

>183_bases
TTGAGAGATAATTTGAAATTTTGGCAAATGGTCCATCCCCTTCAAAAAAGTGGCTTATACAATTTAAAATACTTTTCAGC
GGCACTCAATGCTCGTAATCCAAAATTCTTCCTGCTTTTCCCCGGACCGGCAGCCGTGGGCATAAAGTATCAGTCTCTGA
TGCAAGGAAAATTATCATCATGA

Upstream 100 bases:

>100_bases
GTCTTATTCATAAAATAGCTCTTTGTCATGATCCTGCAAGGTAGATTGAAGCTGATGCTTCTCTATACGTTGAAGCTCAA
AGACCGTTTATCGTTCAAAT

Downstream 100 bases:

>100_bases
ACGAATCAGGGGGCGGGTTTTATCAATCCTGGTCATTATCGACTGTTTTAACGCTATGACCTCCTTGGTTTTCGTCATAG
TTCCCCTTTCTCAAATTTTT

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MRDNLKFWQMVHPLQKSGLYNLKYFSAALNARNPKFFLLFPGPAAVGIKYQSLMQGKLSS

Sequences:

>Translated_60_residues
MRDNLKFWQMVHPLQKSGLYNLKYFSAALNARNPKFFLLFPGPAAVGIKYQSLMQGKLSS
>Mature_60_residues
MRDNLKFWQMVHPLQKSGLYNLKYFSAALNARNPKFFLLFPGPAAVGIKYQSLMQGKLSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6863; Mature: 6863

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDNLKFWQMVHPLQKSGLYNLKYFSAALNARNPKFFLLFPGPAAVGIKYQSLMQGKLSS
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHCCCCCC
>Mature Secondary Structure
MRDNLKFWQMVHPLQKSGLYNLKYFSAALNARNPKFFLLFPGPAAVGIKYQSLMQGKLSS
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA