| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is yjeE [C]
Identifier: 85859375
GI number: 85859375
Start: 1575047
End: 1575520
Strand: Direct
Name: yjeE [C]
Synonym: SYN_02780
Alternate gene names: 85859375
Gene position: 1575047-1575520 (Clockwise)
Preceding gene: 85859374
Following gene: 85859376
Centisome position: 49.54
GC content: 47.68
Gene sequence:
>474_bases ATGAAAAAGCAGATTCTTTCCCGGAAGGCTGAAGAAACGCTGTATATCGGCAAAATCATAGGGTCGTGTCTGACGGCTGG AGATGTTGTCGCCCTCATCGGCGAACTGGGCGCAGGGAAAACATCTCTCACTCAGGGAATCGCCCGTGGTCTTGAAATTT CAGAATCCTACGCCATAACCAGTCCCACATTTACCCTGATTAATGAGTACCCGGGCCGTCATGTTCTCTATCACTTCGAT GTCTATCGTCTCCAGGGATCGAACGACCTGGAGGATATGGGCTATGAGGAATATTTCTATGGGAAAGGAGTTTCCGTTAT CGAGTGGGCGGAGAAAATAGCGGATATCATTCCGGAAACTGCAATCACAATTGAAATCACATTTCTTGATGAAAACACAC GCCGCATTGAAATTTCCGCCCCGGAAAAGCGTCTGGAAGAAATTTCATCGGCCCTCAGTAAGGGAGGATTTTAG
Upstream 100 bases:
>100_bases GTCGGTCCCAGGCGGGAGCGGTTGTCATCCTGGAGGGGCTGAAGGATTGAAAAAAAGTGCCGGACAAACTTCGGCCAACC TGTCGGAGTCTTAATTATTC
Downstream 100 bases:
>100_bases TATATGGCTTTAGTTGTTCAAAAATATGGTGGAACCTCTGTTGCCAATCTGGAGAAAATCGAAAATGTTGCCCGGAAAGT CATCAAAACAAAGAAAGAGG
Product: ATP/GTP hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MKKQILSRKAEETLYIGKIIGSCLTAGDVVALIGELGAGKTSLTQGIARGLEISESYAITSPTFTLINEYPGRHVLYHFD VYRLQGSNDLEDMGYEEYFYGKGVSVIEWAEKIADIIPETAITIEITFLDENTRRIEISAPEKRLEEISSALSKGGF
Sequences:
>Translated_157_residues MKKQILSRKAEETLYIGKIIGSCLTAGDVVALIGELGAGKTSLTQGIARGLEISESYAITSPTFTLINEYPGRHVLYHFD VYRLQGSNDLEDMGYEEYFYGKGVSVIEWAEKIADIIPETAITIEITFLDENTRRIEISAPEKRLEEISSALSKGGF >Mature_157_residues MKKQILSRKAEETLYIGKIIGSCLTAGDVVALIGELGAGKTSLTQGIARGLEISESYAITSPTFTLINEYPGRHVLYHFD VYRLQGSNDLEDMGYEEYFYGKGVSVIEWAEKIADIIPETAITIEITFLDENTRRIEISAPEKRLEEISSALSKGGF
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=152, Percent_Identity=29.6052631578947, Blast_Score=81, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 17386; Mature: 17386
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQILSRKAEETLYIGKIIGSCLTAGDVVALIGELGAGKTSLTQGIARGLEISESYAIT CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEC SPTFTLINEYPGRHVLYHFDVYRLQGSNDLEDMGYEEYFYGKGVSVIEWAEKIADIIPET CCHHEEECCCCCCEEEEEEEEEEECCCCCHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCC AITIEITFLDENTRRIEISAPEKRLEEISSALSKGGF EEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKQILSRKAEETLYIGKIIGSCLTAGDVVALIGELGAGKTSLTQGIARGLEISESYAIT CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEC SPTFTLINEYPGRHVLYHFDVYRLQGSNDLEDMGYEEYFYGKGVSVIEWAEKIADIIPET CCHHEEECCCCCCEEEEEEEEEEECCCCCHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCC AITIEITFLDENTRRIEISAPEKRLEEISSALSKGGF EEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]