| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is acpS
Identifier: 85859374
GI number: 85859374
Start: 1574610
End: 1574996
Strand: Direct
Name: acpS
Synonym: SYN_02779
Alternate gene names: 85859374
Gene position: 1574610-1574996 (Clockwise)
Preceding gene: 85859373
Following gene: 85859375
Centisome position: 49.53
GC content: 49.1
Gene sequence:
>387_bases ATGGTTCATGGAACAGGGATTGATCTGGTTGATATAGACCGCCTCGAAAAAATTCTGATGAAGTGGGACATGAGCTTTCT CAAAAAAGTCTTTTCGCCGGCGGAAATCGAATATTGCGCGAAAAGGGCGTTTCCCGCAATTCATTATGCCGCACGCTTTG CCGCAAAGGAAAGTTTCCTGAAATCTTTAGGCATGGGGATTGGCATGGGGATTCCGCTGAAAGACATTGAAGTGCGAAAC GATCCACTTGGCCGGCCTGTGTTGAATCTTTATGGAAAGGCTCTGGAAATCCTTGAGAAACGGGGCATCACGACTGTGCA TGTAAGTCTTTCACACAGTCGGTCCCAGGCGGGAGCGGTTGTCATCCTGGAGGGGCTGAAGGATTGA
Upstream 100 bases:
>100_bases TGATGTCTCTGTAATGAAAAAAACAGCGGCCGTAACTGACGCCATTCTTCATGCATAGAAATTCAAAATACCTCTCAAAA AAAGCGGAAATCTGATCATC
Downstream 100 bases:
>100_bases AAAAAAGTGCCGGACAAACTTCGGCCAACCTGTCGGAGTCTTAATTATTCATGAAAAAGCAGATTCTTTCCCGGAAGGCT GAAGAAACGCTGTATATCGG
Product: Holo- synthase
Products: NA
Alternate protein names: Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MVHGTGIDLVDIDRLEKILMKWDMSFLKKVFSPAEIEYCAKRAFPAIHYAARFAAKESFLKSLGMGIGMGIPLKDIEVRN DPLGRPVLNLYGKALEILEKRGITTVHVSLSHSRSQAGAVVILEGLKD
Sequences:
>Translated_128_residues MVHGTGIDLVDIDRLEKILMKWDMSFLKKVFSPAEIEYCAKRAFPAIHYAARFAAKESFLKSLGMGIGMGIPLKDIEVRN DPLGRPVLNLYGKALEILEKRGITTVHVSLSHSRSQAGAVVILEGLKD >Mature_128_residues MVHGTGIDLVDIDRLEKILMKWDMSFLKKVFSPAEIEYCAKRAFPAIHYAARFAAKESFLKSLGMGIGMGIPLKDIEVRN DPLGRPVLNLYGKALEILEKRGITTVHVSLSHSRSQAGAVVILEGLKD
Specific function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
COG id: COG0736
COG function: function code I; Phosphopantetheinyl transferase (holo-ACP synthase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. AcpS family
Homologues:
Organism=Escherichia coli, GI1788916, Length=121, Percent_Identity=38.0165289256198, Blast_Score=86, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6325025, Length=114, Percent_Identity=37.719298245614, Blast_Score=76, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACPS_SYNAS (Q2LTJ7)
Other databases:
- EMBL: CP000252 - RefSeq: YP_461576.1 - ProteinModelPortal: Q2LTJ7 - SMR: Q2LTJ7 - STRING: Q2LTJ7 - GeneID: 3884333 - GenomeReviews: CP000252_GR - KEGG: sat:SYN_02779 - NMPDR: fig|56780.10.peg.1521 - eggNOG: COG0736 - HOGENOM: HBG734479 - OMA: QGVFWRD - PhylomeDB: Q2LTJ7 - BioCyc: SACI56780:SYN_02779-MONOMER - GO: GO:0005737 - HAMAP: MF_00101 - InterPro: IPR008278 - InterPro: IPR002582 - InterPro: IPR004568 - ProDom: PD004282 - TIGRFAMs: TIGR00516 - TIGRFAMs: TIGR00556
Pfam domain/function: PF01648 ACPS; SSF56214 4-PPT_transf
EC number: =2.7.8.7
Molecular weight: Translated: 14165; Mature: 14165
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHGTGIDLVDIDRLEKILMKWDMSFLKKVFSPAEIEYCAKRAFPAIHYAARFAAKESFL CCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH KSLGMGIGMGIPLKDIEVRNDPLGRPVLNLYGKALEILEKRGITTVHVSLSHSRSQAGAV HHHCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEE VILEGLKD EEEECCCC >Mature Secondary Structure MVHGTGIDLVDIDRLEKILMKWDMSFLKKVFSPAEIEYCAKRAFPAIHYAARFAAKESFL CCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH KSLGMGIGMGIPLKDIEVRNDPLGRPVLNLYGKALEILEKRGITTVHVSLSHSRSQAGAV HHHCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEE VILEGLKD EEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA