Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is yjeE [C]

Identifier: 85859375

GI number: 85859375

Start: 1575047

End: 1575520

Strand: Direct

Name: yjeE [C]

Synonym: SYN_02780

Alternate gene names: 85859375

Gene position: 1575047-1575520 (Clockwise)

Preceding gene: 85859374

Following gene: 85859376

Centisome position: 49.54

GC content: 47.68

Gene sequence:

>474_bases
ATGAAAAAGCAGATTCTTTCCCGGAAGGCTGAAGAAACGCTGTATATCGGCAAAATCATAGGGTCGTGTCTGACGGCTGG
AGATGTTGTCGCCCTCATCGGCGAACTGGGCGCAGGGAAAACATCTCTCACTCAGGGAATCGCCCGTGGTCTTGAAATTT
CAGAATCCTACGCCATAACCAGTCCCACATTTACCCTGATTAATGAGTACCCGGGCCGTCATGTTCTCTATCACTTCGAT
GTCTATCGTCTCCAGGGATCGAACGACCTGGAGGATATGGGCTATGAGGAATATTTCTATGGGAAAGGAGTTTCCGTTAT
CGAGTGGGCGGAGAAAATAGCGGATATCATTCCGGAAACTGCAATCACAATTGAAATCACATTTCTTGATGAAAACACAC
GCCGCATTGAAATTTCCGCCCCGGAAAAGCGTCTGGAAGAAATTTCATCGGCCCTCAGTAAGGGAGGATTTTAG

Upstream 100 bases:

>100_bases
GTCGGTCCCAGGCGGGAGCGGTTGTCATCCTGGAGGGGCTGAAGGATTGAAAAAAAGTGCCGGACAAACTTCGGCCAACC
TGTCGGAGTCTTAATTATTC

Downstream 100 bases:

>100_bases
TATATGGCTTTAGTTGTTCAAAAATATGGTGGAACCTCTGTTGCCAATCTGGAGAAAATCGAAAATGTTGCCCGGAAAGT
CATCAAAACAAAGAAAGAGG

Product: ATP/GTP hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKKQILSRKAEETLYIGKIIGSCLTAGDVVALIGELGAGKTSLTQGIARGLEISESYAITSPTFTLINEYPGRHVLYHFD
VYRLQGSNDLEDMGYEEYFYGKGVSVIEWAEKIADIIPETAITIEITFLDENTRRIEISAPEKRLEEISSALSKGGF

Sequences:

>Translated_157_residues
MKKQILSRKAEETLYIGKIIGSCLTAGDVVALIGELGAGKTSLTQGIARGLEISESYAITSPTFTLINEYPGRHVLYHFD
VYRLQGSNDLEDMGYEEYFYGKGVSVIEWAEKIADIIPETAITIEITFLDENTRRIEISAPEKRLEEISSALSKGGF
>Mature_157_residues
MKKQILSRKAEETLYIGKIIGSCLTAGDVVALIGELGAGKTSLTQGIARGLEISESYAITSPTFTLINEYPGRHVLYHFD
VYRLQGSNDLEDMGYEEYFYGKGVSVIEWAEKIADIIPETAITIEITFLDENTRRIEISAPEKRLEEISSALSKGGF

Specific function: Unknown

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=152, Percent_Identity=29.6052631578947, Blast_Score=81, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 17386; Mature: 17386

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQILSRKAEETLYIGKIIGSCLTAGDVVALIGELGAGKTSLTQGIARGLEISESYAIT
CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEC
SPTFTLINEYPGRHVLYHFDVYRLQGSNDLEDMGYEEYFYGKGVSVIEWAEKIADIIPET
CCHHEEECCCCCCEEEEEEEEEEECCCCCHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCC
AITIEITFLDENTRRIEISAPEKRLEEISSALSKGGF
EEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKQILSRKAEETLYIGKIIGSCLTAGDVVALIGELGAGKTSLTQGIARGLEISESYAIT
CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEC
SPTFTLINEYPGRHVLYHFDVYRLQGSNDLEDMGYEEYFYGKGVSVIEWAEKIADIIPET
CCHHEEECCCCCCEEEEEEEEEEECCCCCHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCC
AITIEITFLDENTRRIEISAPEKRLEEISSALSKGGF
EEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]