| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is argB
Identifier: 85859271
GI number: 85859271
Start: 1458171
End: 1459061
Strand: Direct
Name: argB
Synonym: SYN_02154
Alternate gene names: 85859271
Gene position: 1458171-1459061 (Clockwise)
Preceding gene: 85859270
Following gene: 85859272
Centisome position: 45.86
GC content: 48.82
Gene sequence:
>891_bases ATGAACACGATAGAAAAACCCACGGAAAAGGCGGAGATCCTGCTGGAAGCGCTTCCTTACATCCGTCGCTTTTACAACCG AACCGTTGTCATCAAATACGGCGGACACGCCATGGTGGATGATGAACTGAAGCAATCTTTTGCCAAAGATGTCCTGATGA TGAAATATATCGGAATCAATCCCGTGGTCGTTCATGGAGGAGGACCGCAGATCGGCTCTTTTCTTAAAAAACTGGGTAAA GACTCCAAATTCATCCAGGGAATGCGGGTAACAGACGAAGAAACCATGAACATTGTCGAAATGGTTCTCGTAGGCAAAGT CAACAAGGAAATCGTCGGTCTTATCAACCATGCTGGGGGCAAAGCCGTGGGCCTGAGCGGCAAGGACGGCAGTCTCATTC GGGCGGAAAAGTATTACCTCAGTGCGGAGAAGGCAAAGGATACTCCACCGGAAATCATTGATATCGGACTTGTGGGCAAG GTTAAGGAAATTAATGCGGATTTGATTACATCCCTTGTCCGCGACGGCTTCATTCCAGTCATTGCCCCAACCGGAGCCGG AGACAGTGGGGAGACCTATAACATCAATGCCGATATTGTGGCAGGCGCCATAGCCGCCGCCCTCAAGGCGGAAAAACTGA TTCTGCTGACAGATGTAGCGGGCGTATTGAATAAACAGGGCGAATTGATCAATACCATGAACAATATGGAGGCACTCGAA ATGATTCATGAAGGTGTCATCGAAGGCGGCATGTTCCCCAAAGTAAAATGCTGCATGAAGTCATTGAGGGAAGGGGTACG CAAGGCTCATATCGTTGACGGACGGCTGAAACATGCCATTCTGCTGGAAATGTTCACCGATAAGGGAATTGGAACGGAAC TCGTACTGTAA
Upstream 100 bases:
>100_bases AGCCGTTACATCCTGTAACTTGCCTTTTTCCTGGCTTTGCAGCATGGGGTGATGCCTGAGATTTATTATTTGAAGATATA TTAATGAGGATGGAGTCATA
Downstream 100 bases:
>100_bases TTACTTGCGGAAGGCGGTTCAAAGGACGGATTTCAAAAACTGGATAATGGAAACTCGCCCTTGGGAGGGATAGGGAATGA CAACAGAGGAACTGATTGCG
Product: acetylglutamate kinase
Products: NA
Alternate protein names: N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; AGK
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MNTIEKPTEKAEILLEALPYIRRFYNRTVVIKYGGHAMVDDELKQSFAKDVLMMKYIGINPVVVHGGGPQIGSFLKKLGK DSKFIQGMRVTDEETMNIVEMVLVGKVNKEIVGLINHAGGKAVGLSGKDGSLIRAEKYYLSAEKAKDTPPEIIDIGLVGK VKEINADLITSLVRDGFIPVIAPTGAGDSGETYNINADIVAGAIAAALKAEKLILLTDVAGVLNKQGELINTMNNMEALE MIHEGVIEGGMFPKVKCCMKSLREGVRKAHIVDGRLKHAILLEMFTDKGIGTELVL
Sequences:
>Translated_296_residues MNTIEKPTEKAEILLEALPYIRRFYNRTVVIKYGGHAMVDDELKQSFAKDVLMMKYIGINPVVVHGGGPQIGSFLKKLGK DSKFIQGMRVTDEETMNIVEMVLVGKVNKEIVGLINHAGGKAVGLSGKDGSLIRAEKYYLSAEKAKDTPPEIIDIGLVGK VKEINADLITSLVRDGFIPVIAPTGAGDSGETYNINADIVAGAIAAALKAEKLILLTDVAGVLNKQGELINTMNNMEALE MIHEGVIEGGMFPKVKCCMKSLREGVRKAHIVDGRLKHAILLEMFTDKGIGTELVL >Mature_296_residues MNTIEKPTEKAEILLEALPYIRRFYNRTVVIKYGGHAMVDDELKQSFAKDVLMMKYIGINPVVVHGGGPQIGSFLKKLGK DSKFIQGMRVTDEETMNIVEMVLVGKVNKEIVGLINHAGGKAVGLSGKDGSLIRAEKYYLSAEKAKDTPPEIIDIGLVGK VKEINADLITSLVRDGFIPVIAPTGAGDSGETYNINADIVAGAIAAALKAEKLILLTDVAGVLNKQGELINTMNNMEALE MIHEGVIEGGMFPKVKCCMKSLREGVRKAHIVDGRLKHAILLEMFTDKGIGTELVL
Specific function: Arginine biosynthesis; first step. [C]
COG id: COG0548
COG function: function code E; Acetylglutamate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetylglutamate kinase family
Homologues:
Organism=Escherichia coli, GI1789181, Length=300, Percent_Identity=26.6666666666667, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI145693208, Length=269, Percent_Identity=31.2267657992565, Blast_Score=94, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6320913, Length=265, Percent_Identity=27.9245283018868, Blast_Score=97, Evalue=4e-21,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): ARGB_SYNAS (Q2LT95)
Other databases:
- EMBL: CP000252 - RefSeq: YP_461473.1 - ProteinModelPortal: Q2LT95 - SMR: Q2LT95 - STRING: Q2LT95 - GeneID: 3884304 - GenomeReviews: CP000252_GR - KEGG: sat:SYN_02154 - NMPDR: fig|56780.10.peg.1411 - eggNOG: COG0548 - HOGENOM: HBG497643 - OMA: MDIVEMV - PhylomeDB: Q2LT95 - BioCyc: SACI56780:SYN_02154-MONOMER - GO: GO:0005737 - HAMAP: MF_00082_B - InterPro: IPR004662 - InterPro: IPR001048 - InterPro: IPR001057 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000728 - PRINTS: PR00474 - TIGRFAMs: TIGR00761
Pfam domain/function: PF00696 AA_kinase; SSF53633 Aa_kinase
EC number: =2.7.2.8
Molecular weight: Translated: 32072; Mature: 32072
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: BINDING 89-89 BINDING 194-194
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIEKPTEKAEILLEALPYIRRFYNRTVVIKYGGHAMVDDELKQSFAKDVLMMKYIGIN CCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECHHHHHHHHHHHHHHHHCCCC PVVVHGGGPQIGSFLKKLGKDSKFIQGMRVTDEETMNIVEMVLVGKVNKEIVGLINHAGG EEEEECCCCHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCC KAVGLSGKDGSLIRAEKYYLSAEKAKDTPPEIIDIGLVGKVKEINADLITSLVRDGFIPV CEEECCCCCCCEEEHHHHEEEHHHCCCCCCCEEEECCCCCHHHCCHHHHHHHHHCCCEEE IAPTGAGDSGETYNINADIVAGAIAAALKAEKLILLTDVAGVLNKQGELINTMNNMEALE EEECCCCCCCCEEECCHHHHHHHHHHHHHHCCEEEEEHHHHHHCCCCHHHHHHHHHHHHH MIHEGVIEGGMFPKVKCCMKSLREGVRKAHIVDGRLKHAILLEMFTDKGIGTELVL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNTIEKPTEKAEILLEALPYIRRFYNRTVVIKYGGHAMVDDELKQSFAKDVLMMKYIGIN CCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECHHHHHHHHHHHHHHHHCCCC PVVVHGGGPQIGSFLKKLGKDSKFIQGMRVTDEETMNIVEMVLVGKVNKEIVGLINHAGG EEEEECCCCHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCC KAVGLSGKDGSLIRAEKYYLSAEKAKDTPPEIIDIGLVGKVKEINADLITSLVRDGFIPV CEEECCCCCCCEEEHHHHEEEHHHCCCCCCCEEEECCCCCHHHCCHHHHHHHHHCCCEEE IAPTGAGDSGETYNINADIVAGAIAAALKAEKLILLTDVAGVLNKQGELINTMNNMEALE EEECCCCCCCCEEECCHHHHHHHHHHHHHHCCEEEEEHHHHHHCCCCHHHHHHHHHHHHH MIHEGVIEGGMFPKVKCCMKSLREGVRKAHIVDGRLKHAILLEMFTDKGIGTELVL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA