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The map label for this gene is fliW

Identifier: 85859206

GI number: 85859206

Start: 1378625

End: 1379101

Strand: Direct

Name: fliW

Synonym: SYN_02809

Alternate gene names: 85859206

Gene position: 1378625-1379101 (Clockwise)

Preceding gene: 85859205

Following gene: 85859214

Centisome position: 43.36

GC content: 41.72

Gene sequence:

>477_bases
GTGAAAATATCAACCACCAGATTTGGAATGATCGAGATCAGTGAGTCGGACATTATTTTGATGAGAAGAGGAATATTAGG
ATTTGAGGAGTCAAAAAAATATGCGCTTCTTTATCAGGATGTTAAAAATCCTTTTTTGTGGTTTCAGTCGCTTGATGACG
GAGCTACAGCTTTTGTAGTAATCGATCCGTTTTTACTGCAGCCTTACTATCAACCCGAATTAAATGACGATACGCTGGAA
AAACTTGAAATCGACAATCCAGAAGATGTTGCCCTTATGGTTATTGTTTCTATTCGTTCGAACCCCGTTCTCCTTACGGC
AAACTTGAGAGCTCCCATTGTGATCAACGCGGCTAAAAAAAAGGCCTGCCAGGTTGTCCTTGAAGACAGTCGTTTCCCGA
TCCGCTATGATATTCTGAAAAACCGGGAATTCCTACTGGGTGGACATTGTTATGAGATTTCCGCGACTGCCCCTTAA

Upstream 100 bases:

>100_bases
CAAAAAGGCCTTTGAATCCGACGTTAAAAACAGTGAGATGCTGTCCGCTCTATGGGCGCAAGTGAAGATATTATAGAAGA
AAACTGACGAGGTGTGATCT

Downstream 100 bases:

>100_bases
AAAGTTCTGATTGAACAGGTCAGTCAGGCTTCTTCATTAAAAAGTATTCCCACCAGCTCATTCATTTTTTCATAAAGCTT
TTGTGTGGCTTCTGGAGGAA

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MKISTTRFGMIEISESDIILMRRGILGFEESKKYALLYQDVKNPFLWFQSLDDGATAFVVIDPFLLQPYYQPELNDDTLE
KLEIDNPEDVALMVIVSIRSNPVLLTANLRAPIVINAAKKKACQVVLEDSRFPIRYDILKNREFLLGGHCYEISATAP

Sequences:

>Translated_158_residues
MKISTTRFGMIEISESDIILMRRGILGFEESKKYALLYQDVKNPFLWFQSLDDGATAFVVIDPFLLQPYYQPELNDDTLE
KLEIDNPEDVALMVIVSIRSNPVLLTANLRAPIVINAAKKKACQVVLEDSRFPIRYDILKNREFLLGGHCYEISATAP
>Mature_158_residues
MKISTTRFGMIEISESDIILMRRGILGFEESKKYALLYQDVKNPFLWFQSLDDGATAFVVIDPFLLQPYYQPELNDDTLE
KLEIDNPEDVALMVIVSIRSNPVLLTANLRAPIVINAAKKKACQVVLEDSRFPIRYDILKNREFLLGGHCYEISATAP

Specific function: Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum

COG id: COG1699

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliW family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FLIW_SYNAS (Q2LT32)

Other databases:

- EMBL:   CP000252
- RefSeq:   YP_461408.1
- ProteinModelPortal:   Q2LT32
- SMR:   Q2LT32
- STRING:   Q2LT32
- GeneID:   3883345
- GenomeReviews:   CP000252_GR
- KEGG:   sat:SYN_02809
- NMPDR:   fig|56780.10.peg.1344
- eggNOG:   COG1699
- HOGENOM:   HBG498829
- OMA:   ISRNESH
- BioCyc:   SACI56780:SYN_02809-MONOMER
- GO:   GO:0005737
- GO:   GO:0019861
- HAMAP:   MF_01185
- InterPro:   IPR003775

Pfam domain/function: PF02623 FliW

EC number: NA

Molecular weight: Translated: 17985; Mature: 17985

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISTTRFGMIEISESDIILMRRGILGFEESKKYALLYQDVKNPFLWFQSLDDGATAFVV
CEECCCEEEEEEECCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEE
IDPFLLQPYYQPELNDDTLEKLEIDNPEDVALMVIVSIRSNPVLLTANLRAPIVINAAKK
ECHHHCCCCCCCCCCCCCHHEEECCCCCCEEEEEEEEECCCCEEEEECCCCCEEEECCCC
KACQVVLEDSRFPIRYDILKNREFLLGGHCYEISATAP
CEEEEEECCCCCCEEEEEECCCEEEECCEEEEEEECCC
>Mature Secondary Structure
MKISTTRFGMIEISESDIILMRRGILGFEESKKYALLYQDVKNPFLWFQSLDDGATAFVV
CEECCCEEEEEEECCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEE
IDPFLLQPYYQPELNDDTLEKLEIDNPEDVALMVIVSIRSNPVLLTANLRAPIVINAAKK
ECHHHCCCCCCCCCCCCCHHEEECCCCCCEEEEEEEEECCCCEEEEECCCCCEEEECCCC
KACQVVLEDSRFPIRYDILKNREFLLGGHCYEISATAP
CEEEEEECCCCCCEEEEEECCCEEEECCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA