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The map label for this gene is 85858364

Identifier: 85858364

GI number: 85858364

Start: 528475

End: 530739

Strand: Direct

Name: 85858364

Synonym: SYN_02327

Alternate gene names: NA

Gene position: 528475-530739 (Clockwise)

Preceding gene: 85858363

Following gene: 85858365

Centisome position: 16.62

GC content: 63.4

Gene sequence:

>2265_bases
ATGGGCTCCTTAACGGTGGACTGCACAAAAGACCGGTTCTCGGCAAAGGAACTGGCTGTCATCATGGGCATATCATGGCA
GGCGATCCAGAAGCGGGCGGATCAGGAAGGCTGGCCTTGTGAAATGGAAACGGGCAGAGGCGGCAAAAGGAAGCTTTTTC
GCCGCGCCGTCCTCCCCGTCGATTGGCAGGCCCGCATCGCCAGACAGCGCGCCGCCCAGGCGGCCGCCGCCATCGCCCCC
GAGTCTCCGGAAATGGCCGGCTATCGGGCCGCCCGGAACTATCTGGAAGACCTGGAAAGGGAGAAGGAAGAGAAACGCCT
TATAAAGGAGAGGGGGCTGGTCGAATTCGCCCGGTTGCCGGAGGCCCGGAAACGGGAGGCGGAGGCCTGCTGGGAGGTCC
TCAAGGCGAAAGACGCCTTCATCGAGGCCGGCGGTTTCGGAAGGATACAGGGAGCAGCCCTGTTCTGCGCCCAGTTCAAT
GAGGGCAAAATTCCCCTGGACGACGGGATTGTCGAGATCGTCAACAAGACCGGCAAGCTCCATCCCTCCACCCTGTACCG
CTGGGAGGAGAAATACGAGACGCAGGGGCTCGCCGGCCTGGCCTGGCATTACGGGAAGAACGCAGGGCGCACGCTGCTGA
CGCCGGACATGCAGGACTTCATCCGCGCGATGATCCTGGAGCACAACCGGGTTTCGGTTCCCAAACTCATGGCGGGCCTG
GAGGCGCGGTTTGCCGGGCAGGAGATCCCCGCTTCCCACGTCGTCTGGAGATGGGCGTCCCGCTGGCGGGACGAGAACCG
CGTGCTGCTTTTATCCATTCACAATCCGGACGAGTGGAAATCGAGGTACGGCGCCGCGTTCGGCAGCGCCTCCGCCTCGG
TGGGCCGCCTCAACCAGTTGTGGGAATCGGATGCCACCCCCGGCGACATCATGCTCGCCGAAGGGCGGCACACGGTGATC
GGAATGATCGACGTCTGGAGCCGCCGGGCGAAGGTACTGGTCGTGCCGTCATCGAAGGCCGTGGCCATCGCGGCGCTTCT
GCGGCGCTGCCTGCTGGACTGGGGCGTTCCCGAAGTCCTGCGGACGGACAACGGCAAGGACTTCACCGCCCGCCACATGA
CGCGCGTCCTGGAATCCCTGGAAATAGAACAGGATCTCTGCCCTCCCTTCACCCCAGAAATGAAGCCCCACATCGAACGC
TTCTTCCATACCTTCTCTCACGGCATCGTGGAACTGCTCCCCGGCTATATAGGCCACAACGTGGCCCAGCGCAAGGCCAT
CGAGTCCCGGAAGTCTTTTGCCGAGCGCCTGATGAAGAAGGGCGCCGTCCTGGATGTGAAGCTTGCCGCCCGGGAGTTCC
AGGAGATCTGCGACCGCTGGATCGAGTCGGTCTATCATCAGGATCCTCACGGCTCCCTGGACGGGAAGCGCCCCGCGGAG
ATGGTCCGCTCCTGGACGGCCCCGGTGCGGAGGATCGCAGACGAGCGGGCCCTGGATGTGCTGCTCGCCCCCGCCCCGCA
GGACGGCGGCGTCCGGAAGGTGGGCAAGAAGGGCGTGACGGTCAACCGGAGGCATTACGTCAACACGGCCCTGATCGGTT
ACGAGGATCAGTCCGTTCAGGTGCTGCTCGATTACGCCGATGTGGGGAAGGCCTACATCTTCGCCGCTTCCGGGGAGTAT
GTCTGCACGGCGGTGGATCCGGACTGGAGCGGCATTTCCGCCGCCGATCTGGCGAGCCACGCGAAACACACGCAGAAGAA
GGCCTACGCCGAAATGCGCAAGGAAGCCCGGAAGCTGATCCGGGAACACAAGATCGCCCTCGTCCCCGAAGACATCCTGG
CGCACCGGGAGAGCCTTCTTGCGAACGTCGAGGAACTGCCTCAAAAGACGGTGGAATATTCCACGCCCGCCCTGAAGGAG
GCCGCCTTTGCCGTGGCCGATGCCGACCGGACGCCCAACGCACAGGCTCTTGCCGGCAGGATCGAGCTGCCGCCTGAGGT
CCTTGAATACGAGGAACGGCAGAAGAAGGTGGTCGACCTCCGGCAGAAGCGGCGGGAGCGACGGGTCTTCGCGAACAACG
AAGAGATATACTGTTGGATTCTGGACCGGATCAAGGCCGGCACAGTCACGGAAACCCAGAAGCAGTGGAAGAAGGAATAC
GAAGCCTGGCAGGAAACCGAGGCCGGGAAAGCGAGAAGGAAGCCCTTCACCAGCACCATTGGAATACGCGCACTGACAGG
GGAAACCGCCGAGGCGGCCCTGTGA

Upstream 100 bases:

>100_bases
TGAACAGCGCCCTGCTGGAGGTGATCTGCTGGTACGTGTGCGCTTTCGCCGTTCTATTTTTTACCGTGAATTTTGTTTAT
CGGCATTTCTGAGGTAGGTC

Downstream 100 bases:

>100_bases
AATTAAGAGGAGGAAGTTGAAATAGGCAATGAGACACGAACTGGCAAAAACGAAGAATGTGCGGCTGTTTATCTCCGCTG
TCGGCGAGCTGCGCAACCGC

Product: transposase

Products: NA

Alternate protein names: ORF 480 [H]

Number of amino acids: Translated: 754; Mature: 753

Protein sequence:

>754_residues
MGSLTVDCTKDRFSAKELAVIMGISWQAIQKRADQEGWPCEMETGRGGKRKLFRRAVLPVDWQARIARQRAAQAAAAIAP
ESPEMAGYRAARNYLEDLEREKEEKRLIKERGLVEFARLPEARKREAEACWEVLKAKDAFIEAGGFGRIQGAALFCAQFN
EGKIPLDDGIVEIVNKTGKLHPSTLYRWEEKYETQGLAGLAWHYGKNAGRTLLTPDMQDFIRAMILEHNRVSVPKLMAGL
EARFAGQEIPASHVVWRWASRWRDENRVLLLSIHNPDEWKSRYGAAFGSASASVGRLNQLWESDATPGDIMLAEGRHTVI
GMIDVWSRRAKVLVVPSSKAVAIAALLRRCLLDWGVPEVLRTDNGKDFTARHMTRVLESLEIEQDLCPPFTPEMKPHIER
FFHTFSHGIVELLPGYIGHNVAQRKAIESRKSFAERLMKKGAVLDVKLAAREFQEICDRWIESVYHQDPHGSLDGKRPAE
MVRSWTAPVRRIADERALDVLLAPAPQDGGVRKVGKKGVTVNRRHYVNTALIGYEDQSVQVLLDYADVGKAYIFAASGEY
VCTAVDPDWSGISAADLASHAKHTQKKAYAEMRKEARKLIREHKIALVPEDILAHRESLLANVEELPQKTVEYSTPALKE
AAFAVADADRTPNAQALAGRIELPPEVLEYEERQKKVVDLRQKRRERRVFANNEEIYCWILDRIKAGTVTETQKQWKKEY
EAWQETEAGKARRKPFTSTIGIRALTGETAEAAL

Sequences:

>Translated_754_residues
MGSLTVDCTKDRFSAKELAVIMGISWQAIQKRADQEGWPCEMETGRGGKRKLFRRAVLPVDWQARIARQRAAQAAAAIAP
ESPEMAGYRAARNYLEDLEREKEEKRLIKERGLVEFARLPEARKREAEACWEVLKAKDAFIEAGGFGRIQGAALFCAQFN
EGKIPLDDGIVEIVNKTGKLHPSTLYRWEEKYETQGLAGLAWHYGKNAGRTLLTPDMQDFIRAMILEHNRVSVPKLMAGL
EARFAGQEIPASHVVWRWASRWRDENRVLLLSIHNPDEWKSRYGAAFGSASASVGRLNQLWESDATPGDIMLAEGRHTVI
GMIDVWSRRAKVLVVPSSKAVAIAALLRRCLLDWGVPEVLRTDNGKDFTARHMTRVLESLEIEQDLCPPFTPEMKPHIER
FFHTFSHGIVELLPGYIGHNVAQRKAIESRKSFAERLMKKGAVLDVKLAAREFQEICDRWIESVYHQDPHGSLDGKRPAE
MVRSWTAPVRRIADERALDVLLAPAPQDGGVRKVGKKGVTVNRRHYVNTALIGYEDQSVQVLLDYADVGKAYIFAASGEY
VCTAVDPDWSGISAADLASHAKHTQKKAYAEMRKEARKLIREHKIALVPEDILAHRESLLANVEELPQKTVEYSTPALKE
AAFAVADADRTPNAQALAGRIELPPEVLEYEERQKKVVDLRQKRRERRVFANNEEIYCWILDRIKAGTVTETQKQWKKEY
EAWQETEAGKARRKPFTSTIGIRALTGETAEAAL
>Mature_753_residues
GSLTVDCTKDRFSAKELAVIMGISWQAIQKRADQEGWPCEMETGRGGKRKLFRRAVLPVDWQARIARQRAAQAAAAIAPE
SPEMAGYRAARNYLEDLEREKEEKRLIKERGLVEFARLPEARKREAEACWEVLKAKDAFIEAGGFGRIQGAALFCAQFNE
GKIPLDDGIVEIVNKTGKLHPSTLYRWEEKYETQGLAGLAWHYGKNAGRTLLTPDMQDFIRAMILEHNRVSVPKLMAGLE
ARFAGQEIPASHVVWRWASRWRDENRVLLLSIHNPDEWKSRYGAAFGSASASVGRLNQLWESDATPGDIMLAEGRHTVIG
MIDVWSRRAKVLVVPSSKAVAIAALLRRCLLDWGVPEVLRTDNGKDFTARHMTRVLESLEIEQDLCPPFTPEMKPHIERF
FHTFSHGIVELLPGYIGHNVAQRKAIESRKSFAERLMKKGAVLDVKLAAREFQEICDRWIESVYHQDPHGSLDGKRPAEM
VRSWTAPVRRIADERALDVLLAPAPQDGGVRKVGKKGVTVNRRHYVNTALIGYEDQSVQVLLDYADVGKAYIFAASGEYV
CTAVDPDWSGISAADLASHAKHTQKKAYAEMRKEARKLIREHKIALVPEDILAHRESLLANVEELPQKTVEYSTPALKEA
AFAVADADRTPNAQALAGRIELPPEVLEYEERQKKVVDLRQKRRERRVFANNEEIYCWILDRIKAGTVTETQKQWKKEYE
AWQETEAGKARRKPFTSTIGIRALTGETAEAAL

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR015378
- InterPro:   IPR009004 [H]

Pfam domain/function: PF09299 Mu-transpos_C; PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 85092; Mature: 84961

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSLTVDCTKDRFSAKELAVIMGISWQAIQKRADQEGWPCEMETGRGGKRKLFRRAVLPV
CCCEEEECCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCC
DWQARIARQRAAQAAAAIAPESPEMAGYRAARNYLEDLEREKEEKRLIKERGLVEFARLP
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
EARKREAEACWEVLKAKDAFIEAGGFGRIQGAALFCAQFNEGKIPLDDGIVEIVNKTGKL
CHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCC
HPSTLYRWEEKYETQGLAGLAWHYGKNAGRTLLTPDMQDFIRAMILEHNRVSVPKLMAGL
CCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHH
EARFAGQEIPASHVVWRWASRWRDENRVLLLSIHNPDEWKSRYGAAFGSASASVGRLNQL
HHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCHHCCCCCHHHHHHHH
WESDATPGDIMLAEGRHTVIGMIDVWSRRAKVLVVPSSKAVAIAALLRRCLLDWGVPEVL
HHCCCCCCCEEEECCCCEEEEHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHH
RTDNGKDFTARHMTRVLESLEIEQDLCPPFTPEMKPHIERFFHTFSHGIVELLPGYIGHN
HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
VAQRKAIESRKSFAERLMKKGAVLDVKLAAREFQEICDRWIESVYHQDPHGSLDGKRPAE
HHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
MVRSWTAPVRRIADERALDVLLAPAPQDGGVRKVGKKGVTVNRRHYVNTALIGYEDQSVQ
HHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHCCCCCEECCCEEEEEEEEECCCCCEE
VLLDYADVGKAYIFAASGEYVCTAVDPDWSGISAADLASHAKHTQKKAYAEMRKEARKLI
EEEEHHHCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
REHKIALVPEDILAHRESLLANVEELPQKTVEYSTPALKEAAFAVADADRTPNAQALAGR
HHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHCC
IELPPEVLEYEERQKKVVDLRQKRRERRVFANNEEIYCWILDRIKAGTVTETQKQWKKEY
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHH
EAWQETEAGKARRKPFTSTIGIRALTGETAEAAL
HHHHHHHCCHHHCCCCCHHCCEEEECCCHHHCCC
>Mature Secondary Structure 
GSLTVDCTKDRFSAKELAVIMGISWQAIQKRADQEGWPCEMETGRGGKRKLFRRAVLPV
CCEEEECCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCC
DWQARIARQRAAQAAAAIAPESPEMAGYRAARNYLEDLEREKEEKRLIKERGLVEFARLP
CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
EARKREAEACWEVLKAKDAFIEAGGFGRIQGAALFCAQFNEGKIPLDDGIVEIVNKTGKL
CHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCC
HPSTLYRWEEKYETQGLAGLAWHYGKNAGRTLLTPDMQDFIRAMILEHNRVSVPKLMAGL
CCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHH
EARFAGQEIPASHVVWRWASRWRDENRVLLLSIHNPDEWKSRYGAAFGSASASVGRLNQL
HHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCHHCCCCCHHHHHHHH
WESDATPGDIMLAEGRHTVIGMIDVWSRRAKVLVVPSSKAVAIAALLRRCLLDWGVPEVL
HHCCCCCCCEEEECCCCEEEEHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHH
RTDNGKDFTARHMTRVLESLEIEQDLCPPFTPEMKPHIERFFHTFSHGIVELLPGYIGHN
HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
VAQRKAIESRKSFAERLMKKGAVLDVKLAAREFQEICDRWIESVYHQDPHGSLDGKRPAE
HHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
MVRSWTAPVRRIADERALDVLLAPAPQDGGVRKVGKKGVTVNRRHYVNTALIGYEDQSVQ
HHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHCCCCCEECCCEEEEEEEEECCCCCEE
VLLDYADVGKAYIFAASGEYVCTAVDPDWSGISAADLASHAKHTQKKAYAEMRKEARKLI
EEEEHHHCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
REHKIALVPEDILAHRESLLANVEELPQKTVEYSTPALKEAAFAVADADRTPNAQALAGR
HHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHCC
IELPPEVLEYEERQKKVVDLRQKRRERRVFANNEEIYCWILDRIKAGTVTETQKQWKKEY
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHH
EAWQETEAGKARRKPFTSTIGIRALTGETAEAAL
HHHHHHHCCHHHCCCCCHHCCEEEECCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2170815 [H]