| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858363
Identifier: 85858363
GI number: 85858363
Start: 527763
End: 528308
Strand: Direct
Name: 85858363
Synonym: SYN_02328
Alternate gene names: NA
Gene position: 527763-528308 (Clockwise)
Preceding gene: 85858362
Following gene: 85858364
Centisome position: 16.6
GC content: 58.42
Gene sequence:
>546_bases TTGACAATGGAAAAAACAGGAAAAGATTTGAACAGGTTGCACGGGTTCACGTTGGTCATTTCGGGTTCATGTTTAAACGA GGAGGAGAGCATGAGGAGACGGAATTGCGGAAACGGAAACCAGTTGTCACTGGAAGGCCTGATCGAATTGCCGAAGCCGC CGGAACTGATCGGGGGGAGCCTGGCTTACGGAGCGGAGCTGCGGGCGACCCTGGCAGCGGCGCTCAAGGAAACCCGGCTG TCCCGCTACGAGGTGGCGGCGAAGATGAGCGAACTCACCGGGACGGAGATCTCCAAGGCCCAGATTGATTCCTGGGCTGC GGAAAGCCGGGAGGGCTGGCGGTTTCCCTTCGAATACGCCGCGGCCTTCGAGGCCGCTCTGGGGACGTACTGCCTCACGG AGCTGCTCGCCCGGAAGCGGGGCTACAAGGTTTACATGGGAGACGACATCCGCCAGGCGGAGATCGGCAAGATTTCCCAG CAGATTGCGGACCTGAACGCCAAACTGGCCATCCTCAAGAAGGGGAAAATCGAAGAGACTATATAA
Upstream 100 bases:
>100_bases AAACGGCTCGGCATGCCACTGGAGAAGGTTTTCCCGGCGTACCGACCGAAAAAACAGGCCGCGTAAACAATCAACTGCTT TTTACGTTAAATTTTAACGT
Downstream 100 bases:
>100_bases GGAAGGACAACGCCATGACTAAGGAAATGCTGCGGGATAAATCACTGGACTGGTTCGACAGACTGATGAACAGCGCCCTG CTGGAGGTGATCTGCTGGTA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTMEKTGKDLNRLHGFTLVISGSCLNEEESMRRRNCGNGNQLSLEGLIELPKPPELIGGSLAYGAELRATLAAALKETRL SRYEVAAKMSELTGTEISKAQIDSWAAESREGWRFPFEYAAAFEAALGTYCLTELLARKRGYKVYMGDDIRQAEIGKISQ QIADLNAKLAILKKGKIEETI
Sequences:
>Translated_181_residues MTMEKTGKDLNRLHGFTLVISGSCLNEEESMRRRNCGNGNQLSLEGLIELPKPPELIGGSLAYGAELRATLAAALKETRL SRYEVAAKMSELTGTEISKAQIDSWAAESREGWRFPFEYAAAFEAALGTYCLTELLARKRGYKVYMGDDIRQAEIGKISQ QIADLNAKLAILKKGKIEETI >Mature_180_residues TMEKTGKDLNRLHGFTLVISGSCLNEEESMRRRNCGNGNQLSLEGLIELPKPPELIGGSLAYGAELRATLAAALKETRLS RYEVAAKMSELTGTEISKAQIDSWAAESREGWRFPFEYAAAFEAALGTYCLTELLARKRGYKVYMGDDIRQAEIGKISQQ IADLNAKLAILKKGKIEETI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19992; Mature: 19861
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMEKTGKDLNRLHGFTLVISGSCLNEEESMRRRNCGNGNQLSLEGLIELPKPPELIGGS CCCCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHCCCCCCEEEHEEEECCCCCHHHHCCC LAYGAELRATLAAALKETRLSRYEVAAKMSELTGTEISKAQIDSWAAESREGWRFPFEYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHH AAFEAALGTYCLTELLARKRGYKVYMGDDIRQAEIGKISQQIADLNAKLAILKKGKIEET HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCHHEEEEECCCCCCC I C >Mature Secondary Structure TMEKTGKDLNRLHGFTLVISGSCLNEEESMRRRNCGNGNQLSLEGLIELPKPPELIGGS CCCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHCCCCCCEEEHEEEECCCCCHHHHCCC LAYGAELRATLAAALKETRLSRYEVAAKMSELTGTEISKAQIDSWAAESREGWRFPFEYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHH AAFEAALGTYCLTELLARKRGYKVYMGDDIRQAEIGKISQQIADLNAKLAILKKGKIEET HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCHHEEEEECCCCCCC I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA