Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858365

Identifier: 85858365

GI number: 85858365

Start: 530768

End: 531487

Strand: Direct

Name: 85858365

Synonym: SYN_02326

Alternate gene names: NA

Gene position: 530768-531487 (Clockwise)

Preceding gene: 85858364

Following gene: 85858366

Centisome position: 16.69

GC content: 64.17

Gene sequence:

>720_bases
ATGAGACACGAACTGGCAAAAACGAAGAATGTGCGGCTGTTTATCTCCGCTGTCGGCGAGCTGCGCAACCGCCCCCTGGG
GGTGGAAGGCATGGGCCTGCTGTGGGGAGAGCCGGGGGAAGGAAAGACAACGGTTGTCGCCTACGCGGCCAACACGATGG
ACGGGATCTTCCTGCGGGCGAATGCCTGTTGGACGGTGACGGCCATGCTGGGCGCCCTGGTCACGGAACTGGGAGGCGCT
CCCCGCGCGCGGAGATCAGTCATGATGGACGACATCTCGCAGCGGCTCATGAATCAGGACCGGGTGATCTTCATCGACGA
GGCGGATTATCTCTTCCGTCAGACGGAGATGCTGGACACCCTGCGGGACATCTACGACCTCACCGGGGCAGCGGTAGTCC
TGATCGGCATGGAGCGCATCGCCCGCACGATCCAGGACCGCGGCCGCTTCGCCCGGCGGATCACCCAGTGGGTGGAGTTC
AAGGGGGTGGATCTCGACGACGCCCGGACCCTGGCGGACACGGTCTGCGAGGTGAAGCTGGCGGATGATCTCCTGGAGCA
TCTGCACCGGGAGGCGAAGGCGAACGTAGGCCGGATGGTCGTCGGGCTGTCGCGGATCGAGCAGATGGCGAAGACTTCGG
GGCTGGAGACGGTAACCCTTGACGACTGGGCGGATCGCCCTCTGTACTTCGATCAGCCGAAGTTCCGGAAGAGGGGGTAG

Upstream 100 bases:

>100_bases
AGAAGGAAGCCCTTCACCAGCACCATTGGAATACGCGCACTGACAGGGGAAACCGCCGAGGCGGCCCTGTGAAATTAAGA
GGAGGAAGTTGAAATAGGCA

Downstream 100 bases:

>100_bases
CCATGCCGGGAGTGAAGGGAATGAAACAGAAACCCGCCCTCTATTCGGCGCGGCAGAAAATGTGGACGACGATCCGGATC
AAGCGGCGCTTCGATATCCG

Product: ATPase AAA

Products: NA

Alternate protein names: Prophage MuSo1 DNA Transposition Protein; Transposase Protein B; Prophage; DNA Transposition Protein; AAA ATPase Family Protein; Phage Transposition Protein B; AAA-Superfamily Of ATPases Protein; XRE Family Transcriptional Regulator; AAA ATPase; Prophage Mu DNA Transposition Protein B; Phage Transposase; B Protein

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MRHELAKTKNVRLFISAVGELRNRPLGVEGMGLLWGEPGEGKTTVVAYAANTMDGIFLRANACWTVTAMLGALVTELGGA
PRARRSVMMDDISQRLMNQDRVIFIDEADYLFRQTEMLDTLRDIYDLTGAAVVLIGMERIARTIQDRGRFARRITQWVEF
KGVDLDDARTLADTVCEVKLADDLLEHLHREAKANVGRMVVGLSRIEQMAKTSGLETVTLDDWADRPLYFDQPKFRKRG

Sequences:

>Translated_239_residues
MRHELAKTKNVRLFISAVGELRNRPLGVEGMGLLWGEPGEGKTTVVAYAANTMDGIFLRANACWTVTAMLGALVTELGGA
PRARRSVMMDDISQRLMNQDRVIFIDEADYLFRQTEMLDTLRDIYDLTGAAVVLIGMERIARTIQDRGRFARRITQWVEF
KGVDLDDARTLADTVCEVKLADDLLEHLHREAKANVGRMVVGLSRIEQMAKTSGLETVTLDDWADRPLYFDQPKFRKRG
>Mature_239_residues
MRHELAKTKNVRLFISAVGELRNRPLGVEGMGLLWGEPGEGKTTVVAYAANTMDGIFLRANACWTVTAMLGALVTELGGA
PRARRSVMMDDISQRLMNQDRVIFIDEADYLFRQTEMLDTLRDIYDLTGAAVVLIGMERIARTIQDRGRFARRITQWVEF
KGVDLDDARTLADTVCEVKLADDLLEHLHREAKANVGRMVVGLSRIEQMAKTSGLETVTLDDWADRPLYFDQPKFRKRG

Specific function: Unknown

COG id: COG2842

COG function: function code R; Uncharacterized ATPase, putative transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26962; Mature: 26962

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHELAKTKNVRLFISAVGELRNRPLGVEGMGLLWGEPGEGKTTVVAYAANTMDGIFLRA
CCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCEEEEC
NACWTVTAMLGALVTELGGAPRARRSVMMDDISQRLMNQDRVIFIDEADYLFRQTEMLDT
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH
LRDIYDLTGAAVVLIGMERIARTIQDRGRFARRITQWVEFKGVDLDDARTLADTVCEVKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ADDLLEHLHREAKANVGRMVVGLSRIEQMAKTSGLETVTLDDWADRPLYFDQPKFRKRG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEECCCCCCCCCC
>Mature Secondary Structure
MRHELAKTKNVRLFISAVGELRNRPLGVEGMGLLWGEPGEGKTTVVAYAANTMDGIFLRA
CCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCEEEEC
NACWTVTAMLGALVTELGGAPRARRSVMMDDISQRLMNQDRVIFIDEADYLFRQTEMLDT
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH
LRDIYDLTGAAVVLIGMERIARTIQDRGRFARRITQWVEFKGVDLDDARTLADTVCEVKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ADDLLEHLHREAKANVGRMVVGLSRIEQMAKTSGLETVTLDDWADRPLYFDQPKFRKRG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA