| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is algI [H]
Identifier: 85858262
GI number: 85858262
Start: 419365
End: 420801
Strand: Direct
Name: algI [H]
Synonym: SYN_01111
Alternate gene names: 85858262
Gene position: 419365-420801 (Clockwise)
Preceding gene: 85858261
Following gene: 85858263
Centisome position: 13.19
GC content: 51.91
Gene sequence:
>1437_bases TTGATGCTTTTCAACTCTCTTGAATTTGCCCTGTTCTTTTCCCTGACCGGTCTGGTTTATTTTCTCTCGCCATTCCGGCT GAGAGTTCCTCTTCTCGTTGTTGCCAGTTACATTTTCTACATAACCTGGCGCTGGGAATATGCTTTTCTGCTGCTCGCAC AGACAGGGATCAATTTCGGTTGCGGCTGGGCGATCTCCTGCTCAAAGTCACAACGTTCCCGCTCTTTATGGCTTGCCTGT GCGGTTGTTTCCAGCTTGGGAATTCTGTTCCTGTTCAAGTATTATAATTTCTTCCTTGATGCTCTCGGTTTTGTGATTCC TGCATCGTCAGAAAAAACCGGACTTGCGGCGATGAACATCGCCATTCCCGTTGGCATATCCTTCTATACCCTGCAGGCCC TGGGGTATTCCTTTGATGTCTACAGGGGGAAAATTGAACGGGAAAAAGATCCGGTGCAATTCGCACTTTTCGTCGGATTT TTCCCCCAGCTTCTCTCCGGTCCCATCGAACGTGCCGGAAACATGCTCAAGCAGTTTCGGCCGGAAAATGCGTTCGATCT GGACAGAATGTACTCCGGCCTTGCCCTCATGCTCTGGGGGCTCTTCAAGAAGGTCGTGATCGCCGACCGCCTGGCTGTTT ATGTCAATCTGGTCTACAACGATCCCCAAGGCTTTTCAGGCCCGACCCTTCTTCTGGCCACCTATTTCTTTGCGTTTCAG ATCTACTGCGACTTTTCCGGATACTCGGACATGGCGATCGGCGCTGCACGGGTCCTGGGCTACGACATCATGACCAATTT CCGGCTTCCCTATTTCGCCGATTCCATCTCGGATTTCTGGCACCGCTGGCACATTTCGCTTTCTACATGGTTCCGGGATT ACCTGTATATCCCGCTGGGAGGGAACCGGGGAAGCCTTTTCCGCCAACAGGCCAACATCCTGATGGTCTTTGCGGTCAGC GGCCTCTGGCATGGCGCGAACTGGACGTTTGTTCTCTGGGGGGCGCTCCACGGCTTCTATTATATACTGGAGCGGGTTTT TGGGGGTCCGGCTGCGCGACTCTGCGCCATTCTGGGTGTCCAAGGGTCCCTTTTGAAAGGATTGAAGATTTTCATTATCT TCCACCTTGTCACTCTGGCCTGGGTATTTTTCAAGGCCCGCTCTGTGACTGATGCACTCCATGTCCTTCGAGGCATTTTT ACGAATTTCGGAGGGGCGCTCTACCTTGGCCCTTCACAGTTGACAACGCTCATCGGCGCATCTCTGATCTTTCTTCTCAT GATCGTTCAATTCTTCCAGTATCGCGGTCTGATACCCCTGCTCAGAGCCGAACGCAGCTTCCCGATCTACATCCGCTGGC CGGCCTATGCTGCCATGATTTTCGGGATCTCCATCTTCGGAATCAGCAGCAATGAATTCATCTATTTCCAGTTTTAG
Upstream 100 bases:
>100_bases CCAGCCGTCCACCCCCATCGAGGAAGGCATCCGGCGGTTTGTGACGTGGTATCGGGAGTATTACGCGCTGTAATCATCGG CCAGGCAACGGTCAAAGGTA
Downstream 100 bases:
>100_bases GAAGCGGGAAGAGCCCCACCGTAAAAATCCGAGCAAGCTCAGCCGATCTTTTGCGCGGGCTGCCTTTTTTATGATGTTCC TTGTTGTTTTCGATCTGATG
Product: membrane-bound O-acyltransferase
Products: NA
Alternate protein names: Alginate biosynthesis protein AlgI [H]
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MMLFNSLEFALFFSLTGLVYFLSPFRLRVPLLVVASYIFYITWRWEYAFLLLAQTGINFGCGWAISCSKSQRSRSLWLAC AVVSSLGILFLFKYYNFFLDALGFVIPASSEKTGLAAMNIAIPVGISFYTLQALGYSFDVYRGKIEREKDPVQFALFVGF FPQLLSGPIERAGNMLKQFRPENAFDLDRMYSGLALMLWGLFKKVVIADRLAVYVNLVYNDPQGFSGPTLLLATYFFAFQ IYCDFSGYSDMAIGAARVLGYDIMTNFRLPYFADSISDFWHRWHISLSTWFRDYLYIPLGGNRGSLFRQQANILMVFAVS GLWHGANWTFVLWGALHGFYYILERVFGGPAARLCAILGVQGSLLKGLKIFIIFHLVTLAWVFFKARSVTDALHVLRGIF TNFGGALYLGPSQLTTLIGASLIFLLMIVQFFQYRGLIPLLRAERSFPIYIRWPAYAAMIFGISIFGISSNEFIYFQF
Sequences:
>Translated_478_residues MMLFNSLEFALFFSLTGLVYFLSPFRLRVPLLVVASYIFYITWRWEYAFLLLAQTGINFGCGWAISCSKSQRSRSLWLAC AVVSSLGILFLFKYYNFFLDALGFVIPASSEKTGLAAMNIAIPVGISFYTLQALGYSFDVYRGKIEREKDPVQFALFVGF FPQLLSGPIERAGNMLKQFRPENAFDLDRMYSGLALMLWGLFKKVVIADRLAVYVNLVYNDPQGFSGPTLLLATYFFAFQ IYCDFSGYSDMAIGAARVLGYDIMTNFRLPYFADSISDFWHRWHISLSTWFRDYLYIPLGGNRGSLFRQQANILMVFAVS GLWHGANWTFVLWGALHGFYYILERVFGGPAARLCAILGVQGSLLKGLKIFIIFHLVTLAWVFFKARSVTDALHVLRGIF TNFGGALYLGPSQLTTLIGASLIFLLMIVQFFQYRGLIPLLRAERSFPIYIRWPAYAAMIFGISIFGISSNEFIYFQF >Mature_478_residues MMLFNSLEFALFFSLTGLVYFLSPFRLRVPLLVVASYIFYITWRWEYAFLLLAQTGINFGCGWAISCSKSQRSRSLWLAC AVVSSLGILFLFKYYNFFLDALGFVIPASSEKTGLAAMNIAIPVGISFYTLQALGYSFDVYRGKIEREKDPVQFALFVGF FPQLLSGPIERAGNMLKQFRPENAFDLDRMYSGLALMLWGLFKKVVIADRLAVYVNLVYNDPQGFSGPTLLLATYFFAFQ IYCDFSGYSDMAIGAARVLGYDIMTNFRLPYFADSISDFWHRWHISLSTWFRDYLYIPLGGNRGSLFRQQANILMVFAVS GLWHGANWTFVLWGALHGFYYILERVFGGPAARLCAILGVQGSLLKGLKIFIIFHLVTLAWVFFKARSVTDALHVLRGIF TNFGGALYLGPSQLTTLIGASLIFLLMIVQFFQYRGLIPLLRAERSFPIYIRWPAYAAMIFGISIFGISSNEFIYFQF
Specific function: Together with AlgV and AlgF, forms an inner membrane complex which probably interacts with the alginate polymerization- transport complex and adds acetyl groups at the O-2 and O-3 positions of polymannuronic acid. Acetylation of alginate increases cyst re
COG id: COG1696
COG function: function code M; Predicted membrane protein involved in D-alanine export
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane-bound acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004299 [H]
Pfam domain/function: PF03062 MBOAT [H]
EC number: NA
Molecular weight: Translated: 54397; Mature: 54397
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLFNSLEFALFFSLTGLVYFLSPFRLRVPLLVVASYIFYITWRWEYAFLLLAQTGINFG CCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEHHHEEEEEECCCCCCC CGWAISCSKSQRSRSLWLACAVVSSLGILFLFKYYNFFLDALGFVIPASSEKTGLAAMNI CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEE AIPVGISFYTLQALGYSFDVYRGKIEREKDPVQFALFVGFFPQLLSGPIERAGNMLKQFR EEECCCHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCC PENAFDLDRMYSGLALMLWGLFKKVVIADRLAVYVNLVYNDPQGFSGPTLLLATYFFAFQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHE IYCDFSGYSDMAIGAARVLGYDIMTNFRLPYFADSISDFWHRWHISLSTWFRDYLYIPLG EEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEHHHHHHCEEEEEEC GNRGSLFRQQANILMVFAVSGLWHGANWTFVLWGALHGFYYILERVFGGPAARLCAILGV CCCCHHHHHHCCEEEEEEECCCEECCCHHEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCC QGSLLKGLKIFIIFHLVTLAWVFFKARSVTDALHVLRGIFTNFGGALYLGPSQLTTLIGA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHH SLIFLLMIVQFFQYRGLIPLLRAERSFPIYIRWPAYAAMIFGISIFGISSNEFIYFQF HHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECHHHHHHHHHHHEEEECCCCEEEEEC >Mature Secondary Structure MMLFNSLEFALFFSLTGLVYFLSPFRLRVPLLVVASYIFYITWRWEYAFLLLAQTGINFG CCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEHHHEEEEEECCCCCCC CGWAISCSKSQRSRSLWLACAVVSSLGILFLFKYYNFFLDALGFVIPASSEKTGLAAMNI CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEE AIPVGISFYTLQALGYSFDVYRGKIEREKDPVQFALFVGFFPQLLSGPIERAGNMLKQFR EEECCCHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCC PENAFDLDRMYSGLALMLWGLFKKVVIADRLAVYVNLVYNDPQGFSGPTLLLATYFFAFQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHE IYCDFSGYSDMAIGAARVLGYDIMTNFRLPYFADSISDFWHRWHISLSTWFRDYLYIPLG EEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEHHHHHHCEEEEEEC GNRGSLFRQQANILMVFAVSGLWHGANWTFVLWGALHGFYYILERVFGGPAARLCAILGV CCCCHHHHHHCCEEEEEEECCCEECCCHHEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCC QGSLLKGLKIFIIFHLVTLAWVFFKARSVTDALHVLRGIFTNFGGALYLGPSQLTTLIGA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHH SLIFLLMIVQFFQYRGLIPLLRAERSFPIYIRWPAYAAMIFGISIFGISSNEFIYFQF HHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECHHHHHHHHHHHEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10352233 [H]