Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858263

Identifier: 85858263

GI number: 85858263

Start: 420776

End: 421744

Strand: Direct

Name: 85858263

Synonym: SYN_01110

Alternate gene names: NA

Gene position: 420776-421744 (Clockwise)

Preceding gene: 85858262

Following gene: 85858264

Centisome position: 13.23

GC content: 50.46

Gene sequence:

>969_bases
ATGAATTCATCTATTTCCAGTTTTAGGAAGCGGGAAGAGCCCCACCGTAAAAATCCGAGCAAGCTCAGCCGATCTTTTGC
GCGGGCTGCCTTTTTTATGATGTTCCTTGTTGTTTTCGATCTGATGATCGGTTCGGTTCTGGATGTGGGATTGCGCCGCT
ATTTCGGTATGGATGGGAAAGTGGATGTTCTGTGCGTCGGGCACAGCCGCACCGTTCTGGGAATTGACGCCGAAATGCTT
TCACGGGAAACCGGCTTGAGGGTTGCCAAGTACGCCGTCAACGGTGCGAATATCGCGGACCGTGATGCCATGATCCGCCA
GTTTCTTACCGATCATCCCGAGGTCCGGCTGATCATATATGATGTGGAAGCTTCCACCTTCTCGGATGACGGCCTGAGTT
CAAATTCTTACCGTCTGTTTTTCCCCTTTCTGGATAACCCGGAAATGGGCGCTTACCTGAAAAAGCAAGGGCTTGCCAGT
TCGGATTTTTGGCTGAAAAAAATTGTCAGGACGGCCAGATATGATGAAACGACCTTTTCCCTGGCCATGCGGGGCCTGCT
GGGCATGAACCGAAACCTGAAACACGGGCGGTTTGATGAGGCCAGAGCCAGACGATGGATCGAACAGGGAAAGAACCGCT
CCGTGAAGATCGATTCCAAAAGCTACAAGGCCTTCCTGGCCACGGTGGATTTTGTGCATTCTCGTGGGGTTACCATGCTG
CTCGTGGATATGCCCACGGTGGACCTGCTGAATCAGGCTGAACGGCCGGCAAGTGAAGCGGTGAGGGCCATGTTCGGAAA
GTTTGAAGAACAATATACAAACCTGGATTATTACGACTTGAGCACCGCTTACGAGAGCGACTATGGGATCTTTTATGACA
TGATTCATCTGAATGCCGGGGGGCAGAAGATAGTTACGAGTGTCCTTACTCAAGAAGTGAAAAAAAGAATTCTGAAAATT
CAGGCATAA

Upstream 100 bases:

>100_bases
ATACCCCTGCTCAGAGCCGAACGCAGCTTCCCGATCTACATCCGCTGGCCGGCCTATGCTGCCATGATTTTCGGGATCTC
CATCTTCGGAATCAGCAGCA

Downstream 100 bases:

>100_bases
ATGTCTGATTCATTAAAAAATACGACAATTCGCAATATAGGCTACACCTCAATTACTAAGGTCATACAAATTGTTACCAG
TGCGATCGCAAACATTATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MNSSISSFRKREEPHRKNPSKLSRSFARAAFFMMFLVVFDLMIGSVLDVGLRRYFGMDGKVDVLCVGHSRTVLGIDAEML
SRETGLRVAKYAVNGANIADRDAMIRQFLTDHPEVRLIIYDVEASTFSDDGLSSNSYRLFFPFLDNPEMGAYLKKQGLAS
SDFWLKKIVRTARYDETTFSLAMRGLLGMNRNLKHGRFDEARARRWIEQGKNRSVKIDSKSYKAFLATVDFVHSRGVTML
LVDMPTVDLLNQAERPASEAVRAMFGKFEEQYTNLDYYDLSTAYESDYGIFYDMIHLNAGGQKIVTSVLTQEVKKRILKI
QA

Sequences:

>Translated_322_residues
MNSSISSFRKREEPHRKNPSKLSRSFARAAFFMMFLVVFDLMIGSVLDVGLRRYFGMDGKVDVLCVGHSRTVLGIDAEML
SRETGLRVAKYAVNGANIADRDAMIRQFLTDHPEVRLIIYDVEASTFSDDGLSSNSYRLFFPFLDNPEMGAYLKKQGLAS
SDFWLKKIVRTARYDETTFSLAMRGLLGMNRNLKHGRFDEARARRWIEQGKNRSVKIDSKSYKAFLATVDFVHSRGVTML
LVDMPTVDLLNQAERPASEAVRAMFGKFEEQYTNLDYYDLSTAYESDYGIFYDMIHLNAGGQKIVTSVLTQEVKKRILKI
QA
>Mature_322_residues
MNSSISSFRKREEPHRKNPSKLSRSFARAAFFMMFLVVFDLMIGSVLDVGLRRYFGMDGKVDVLCVGHSRTVLGIDAEML
SRETGLRVAKYAVNGANIADRDAMIRQFLTDHPEVRLIIYDVEASTFSDDGLSSNSYRLFFPFLDNPEMGAYLKKQGLAS
SDFWLKKIVRTARYDETTFSLAMRGLLGMNRNLKHGRFDEARARRWIEQGKNRSVKIDSKSYKAFLATVDFVHSRGVTML
LVDMPTVDLLNQAERPASEAVRAMFGKFEEQYTNLDYYDLSTAYESDYGIFYDMIHLNAGGQKIVTSVLTQEVKKRILKI
QA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36741; Mature: 36741

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSISSFRKREEPHRKNPSKLSRSFARAAFFMMFLVVFDLMIGSVLDVGLRRYFGMDGK
CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VDVLCVGHSRTVLGIDAEMLSRETGLRVAKYAVNGANIADRDAMIRQFLTDHPEVRLIIY
EEEEEECCCCEEEECCHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEE
DVEASTFSDDGLSSNSYRLFFPFLDNPEMGAYLKKQGLASSDFWLKKIVRTARYDETTFS
ECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH
LAMRGLLGMNRNLKHGRFDEARARRWIEQGKNRSVKIDSKSYKAFLATVDFVHSRGVTML
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCEEE
LVDMPTVDLLNQAERPASEAVRAMFGKFEEQYTNLDYYDLSTAYESDYGIFYDMIHLNAG
EEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCEEEEEEEECCC
GQKIVTSVLTQEVKKRILKIQA
CHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSSISSFRKREEPHRKNPSKLSRSFARAAFFMMFLVVFDLMIGSVLDVGLRRYFGMDGK
CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VDVLCVGHSRTVLGIDAEMLSRETGLRVAKYAVNGANIADRDAMIRQFLTDHPEVRLIIY
EEEEEECCCCEEEECCHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEE
DVEASTFSDDGLSSNSYRLFFPFLDNPEMGAYLKKQGLASSDFWLKKIVRTARYDETTFS
ECCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH
LAMRGLLGMNRNLKHGRFDEARARRWIEQGKNRSVKIDSKSYKAFLATVDFVHSRGVTML
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCEEE
LVDMPTVDLLNQAERPASEAVRAMFGKFEEQYTNLDYYDLSTAYESDYGIFYDMIHLNAG
EEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCEEEEEEEECCC
GQKIVTSVLTQEVKKRILKIQA
CHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA