| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is bacA [H]
Identifier: 85858227
GI number: 85858227
Start: 380643
End: 382241
Strand: Direct
Name: bacA [H]
Synonym: SYN_01145
Alternate gene names: 85858227
Gene position: 380643-382241 (Clockwise)
Preceding gene: 85858226
Following gene: 85858228
Centisome position: 11.97
GC content: 52.97
Gene sequence:
>1599_bases ATGCCGAACCACCTACTGCACCATCAACTGACCAATACGTCCTGGCGATGCCCGGAAAAAGAAGCGGTCATCGCCGTTGA TCGGTCGATATCCTACCAGGAACTGGAGGAGCGGAGCAATCAGCTTGCCTCGGTCCTCATGCGCGCCGGTGTTCAAAAGG GAGACCGGGTCGGGATATTTCTTCCCAAGTCCATCGAATCCCTGATCAGCCTGTTCGCTATTCTGAAAAACGGCTCCACT TATGTTCCCATCGATCCCAGGCTGCCTTCCGGCAGAATAGAGTACATTCTTCAAAATTGCGACATCGCGTGCATGATTTC CTCCTCCGCAACGTTGAAGAAAGTCCTGGCGGATTTGAGCGATGACCTTGCCCTGAAAAAGGTCATTCTTACCGACTGGG ATGGGGATGAAAACGAAAAGCCGGAGGGACATCCGCAATTCATCCCCTGGACGAGCATCAGGGATGAGGATGGACAGAGG AATCCGGGACCGGACATCGCCGATGTCAATCCCGCCTACATCCTCTATACATCCGGATCGACGGGCACCCCCAAGGGGGT GGCCATCTCCCACTTGAATTCCCTCACGTTCGTCAATATGGCCGCTGAATATTTCGGCATCGATACTCCGGACAGGCTGG CGAGTTTCGCCCCCCTTCATTTCGATCTGTCGATCTTCGACATTTTTACCGCGGTCCGTCAAGGGGCCTCCATTGTCCTC GTCCCTGAATTTTATTCCACGTTTCCGATAAGACTCGCGGAATATATCGATAAACAGCGCGTCACCGTCTGGAATTCCGT TTCTTCCGTCCTCATCATGCTCGTGGATATGGGAAAGCTCGAGAAGTGCGGCTTTGAAACGCTCAGGCTCATTCATTTTT CCGGTGACATTCTTCCTCCCAGATACCTCCGGGAATTGAAAAGTCATATGAAAAACGCGGACTTCTACAATATCTACGGC CAGACCGAGGCGAACTCGTCCATGTGTTATCACATCGGCGCCGTTCCGCCGGGTGATCACTGGAAAATCCCCATCGGCAA ACCGTTTCCCAATTTTGAAGTTTTCGCGGTCAACGAGGATGGGCGGAAAATATCCTCGCCCGGCCAGGAGGGTGAACTTT ACGTCAAAAGCTCCACGGTTGCCGTCGGGTACTGGAATGACGGAGAAAGAACGAAGGAGCGATTCACTTCCAATCCCCTG GATCCGGCTGACGCGTCACGATGCTATAAAACAGGCGATATTGTAAAACTGGATGACAAAGGAAATTTTGTCTTCGTGGG GCGCAAAGACTCCATGGTGAAGAGCAGGGGGTACCGCATCGAGCTCAATGAAATCGAAATCATTCTGAACGGCCATCCCC TGGTGAGACAGGCCGTGGCCGTCGCGGCGCCCGATGAAAAAATAGGCCACCTAGTGGTCGGTTTCGCGTCGCTCGTTGAA GGAGAATCCCTGTCGGAAATCGATCTCCTTCGTTACTGTCAGGATCGTCTGCCCAAATACATGGTTCCGGAATCGATTCA CTTTTTGAAGCGCCTTCCGACGACGTCGTCGGGAAAAGTGGACCGGAAAGCGATGGAAAAAGAGGCGCTGGAAGGGTAG
Upstream 100 bases:
>100_bases TCTCCGTGATTCCATCGCCGGAAAAATCTATTCCGGAAGCTCCGAGATTCAGAGAAATATCCTGGCAAGCTTTCTGGGGT TATAGCGGAGGGGATAAAGA
Downstream 100 bases:
>100_bases GAGGAATTCAACCCGTGCGTATTCTTGAAATCGGCATGTTCTATGAACCGGATCTCGGCCCCGGCGCTCCCCTGTGCACG ATGCTCAGCAGAGAGCTGGC
Product: fatty acid-CoA ligase
Products: NA
Alternate protein names: BA1; ATP-dependent isoleucine adenylase; IleA; Isoleucine activase; ATP-dependent cysteine adenylase; CysA; Cysteine activase; ATP-dependent leucine adenylase; LeuA; Leucine activase; ATP-dependent glutamate adenylase; GluA; Glutamate activase; ATP-dependent isoleucine adenylase; IleA; Isoleucine activase; Glutamate racemase [H]
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MPNHLLHHQLTNTSWRCPEKEAVIAVDRSISYQELEERSNQLASVLMRAGVQKGDRVGIFLPKSIESLISLFAILKNGST YVPIDPRLPSGRIEYILQNCDIACMISSSATLKKVLADLSDDLALKKVILTDWDGDENEKPEGHPQFIPWTSIRDEDGQR NPGPDIADVNPAYILYTSGSTGTPKGVAISHLNSLTFVNMAAEYFGIDTPDRLASFAPLHFDLSIFDIFTAVRQGASIVL VPEFYSTFPIRLAEYIDKQRVTVWNSVSSVLIMLVDMGKLEKCGFETLRLIHFSGDILPPRYLRELKSHMKNADFYNIYG QTEANSSMCYHIGAVPPGDHWKIPIGKPFPNFEVFAVNEDGRKISSPGQEGELYVKSSTVAVGYWNDGERTKERFTSNPL DPADASRCYKTGDIVKLDDKGNFVFVGRKDSMVKSRGYRIELNEIEIILNGHPLVRQAVAVAAPDEKIGHLVVGFASLVE GESLSEIDLLRYCQDRLPKYMVPESIHFLKRLPTTSSGKVDRKAMEKEALEG
Sequences:
>Translated_532_residues MPNHLLHHQLTNTSWRCPEKEAVIAVDRSISYQELEERSNQLASVLMRAGVQKGDRVGIFLPKSIESLISLFAILKNGST YVPIDPRLPSGRIEYILQNCDIACMISSSATLKKVLADLSDDLALKKVILTDWDGDENEKPEGHPQFIPWTSIRDEDGQR NPGPDIADVNPAYILYTSGSTGTPKGVAISHLNSLTFVNMAAEYFGIDTPDRLASFAPLHFDLSIFDIFTAVRQGASIVL VPEFYSTFPIRLAEYIDKQRVTVWNSVSSVLIMLVDMGKLEKCGFETLRLIHFSGDILPPRYLRELKSHMKNADFYNIYG QTEANSSMCYHIGAVPPGDHWKIPIGKPFPNFEVFAVNEDGRKISSPGQEGELYVKSSTVAVGYWNDGERTKERFTSNPL DPADASRCYKTGDIVKLDDKGNFVFVGRKDSMVKSRGYRIELNEIEIILNGHPLVRQAVAVAAPDEKIGHLVVGFASLVE GESLSEIDLLRYCQDRLPKYMVPESIHFLKRLPTTSSGKVDRKAMEKEALEG >Mature_531_residues PNHLLHHQLTNTSWRCPEKEAVIAVDRSISYQELEERSNQLASVLMRAGVQKGDRVGIFLPKSIESLISLFAILKNGSTY VPIDPRLPSGRIEYILQNCDIACMISSSATLKKVLADLSDDLALKKVILTDWDGDENEKPEGHPQFIPWTSIRDEDGQRN PGPDIADVNPAYILYTSGSTGTPKGVAISHLNSLTFVNMAAEYFGIDTPDRLASFAPLHFDLSIFDIFTAVRQGASIVLV PEFYSTFPIRLAEYIDKQRVTVWNSVSSVLIMLVDMGKLEKCGFETLRLIHFSGDILPPRYLRELKSHMKNADFYNIYGQ TEANSSMCYHIGAVPPGDHWKIPIGKPFPNFEVFAVNEDGRKISSPGQEGELYVKSSTVAVGYWNDGERTKERFTSNPLD PADASRCYKTGDIVKLDDKGNFVFVGRKDSMVKSRGYRIELNEIEIILNGHPLVRQAVAVAAPDEKIGHLVVGFASLVEG ESLSEIDLLRYCQDRLPKYMVPESIHFLKRLPTTSSGKVDRKAMEKEALEG
Specific function: Activates five amino acids, incorporates two D-amino acids, releases and cyclizes the mature bacitracin [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 5 acyl carrier domains [H]
Homologues:
Organism=Homo sapiens, GI156151445, Length=551, Percent_Identity=23.7749546279492, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI187761345, Length=540, Percent_Identity=26.1111111111111, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI187761343, Length=540, Percent_Identity=26.1111111111111, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI38505220, Length=510, Percent_Identity=26.6666666666667, Blast_Score=140, Evalue=4e-33, Organism=Homo sapiens, GI42544132, Length=521, Percent_Identity=27.6391554702495, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI122937307, Length=514, Percent_Identity=25.2918287937743, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI157311624, Length=513, Percent_Identity=24.1715399610136, Blast_Score=116, Evalue=6e-26, Organism=Homo sapiens, GI157311622, Length=513, Percent_Identity=24.1715399610136, Blast_Score=116, Evalue=6e-26, Organism=Homo sapiens, GI115511026, Length=519, Percent_Identity=23.6994219653179, Blast_Score=115, Evalue=9e-26, Organism=Homo sapiens, GI58082049, Length=513, Percent_Identity=24.3664717348928, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI45580730, Length=529, Percent_Identity=23.6294896030246, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI8923896, Length=553, Percent_Identity=24.2314647377938, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI253970489, Length=566, Percent_Identity=24.0282685512367, Blast_Score=96, Evalue=9e-20, Organism=Homo sapiens, GI195947378, Length=423, Percent_Identity=23.8770685579196, Blast_Score=87, Evalue=5e-17, Organism=Escherichia coli, GI1786801, Length=538, Percent_Identity=27.3234200743494, Blast_Score=176, Evalue=3e-45, Organism=Escherichia coli, GI1788107, Length=546, Percent_Identity=26.007326007326, Blast_Score=158, Evalue=1e-39, Organism=Escherichia coli, GI145693145, Length=524, Percent_Identity=24.618320610687, Blast_Score=136, Evalue=3e-33, Organism=Escherichia coli, GI221142682, Length=513, Percent_Identity=27.2904483430799, Blast_Score=136, Evalue=4e-33, Organism=Escherichia coli, GI1790505, Length=528, Percent_Identity=23.6742424242424, Blast_Score=125, Evalue=5e-30, Organism=Escherichia coli, GI1786810, Length=530, Percent_Identity=23.9622641509434, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1786529, Length=570, Percent_Identity=22.6315789473684, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71994690, Length=550, Percent_Identity=25.6363636363636, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI71994694, Length=550, Percent_Identity=25.6363636363636, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI71994703, Length=548, Percent_Identity=25.7299270072993, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17560308, Length=570, Percent_Identity=24.3859649122807, Blast_Score=135, Evalue=6e-32, Organism=Caenorhabditis elegans, GI17558820, Length=507, Percent_Identity=26.0355029585799, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17557194, Length=534, Percent_Identity=21.9101123595506, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17538037, Length=536, Percent_Identity=22.2014925373134, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71983001, Length=538, Percent_Identity=24.907063197026, Blast_Score=109, Evalue=4e-24, Organism=Caenorhabditis elegans, GI71982997, Length=538, Percent_Identity=24.907063197026, Blast_Score=109, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17531443, Length=524, Percent_Identity=22.5190839694656, Blast_Score=108, Evalue=6e-24, Organism=Caenorhabditis elegans, GI32563687, Length=516, Percent_Identity=22.6744186046512, Blast_Score=108, Evalue=7e-24, Organism=Caenorhabditis elegans, GI71996755, Length=539, Percent_Identity=23.191094619666, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI32564420, Length=357, Percent_Identity=26.0504201680672, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI32564422, Length=357, Percent_Identity=26.0504201680672, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17559526, Length=367, Percent_Identity=23.9782016348774, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71985884, Length=382, Percent_Identity=21.2041884816754, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI115534440, Length=565, Percent_Identity=22.6548672566372, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17556356, Length=359, Percent_Identity=25.6267409470752, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17560140, Length=543, Percent_Identity=21.5469613259669, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6319591, Length=593, Percent_Identity=25.4637436762226, Blast_Score=163, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6319699, Length=541, Percent_Identity=21.81146025878, Blast_Score=136, Evalue=8e-33, Organism=Saccharomyces cerevisiae, GI6323182, Length=579, Percent_Identity=26.9430051813472, Blast_Score=124, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6319264, Length=555, Percent_Identity=25.2252252252252, Blast_Score=115, Evalue=2e-26, Organism=Drosophila melanogaster, GI24648676, Length=528, Percent_Identity=27.0833333333333, Blast_Score=153, Evalue=3e-37, Organism=Drosophila melanogaster, GI24581924, Length=551, Percent_Identity=24.8638838475499, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI62472339, Length=539, Percent_Identity=25.7884972170686, Blast_Score=122, Evalue=6e-28, Organism=Drosophila melanogaster, GI24667955, Length=539, Percent_Identity=25.7884972170686, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI21355181, Length=524, Percent_Identity=22.1374045801527, Blast_Score=110, Evalue=4e-24, Organism=Drosophila melanogaster, GI18859661, Length=542, Percent_Identity=22.6937269372694, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24648260, Length=504, Percent_Identity=23.6111111111111, Blast_Score=101, Evalue=2e-21, Organism=Drosophila melanogaster, GI24667959, Length=413, Percent_Identity=27.1186440677966, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI24656500, Length=510, Percent_Identity=22.7450980392157, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI24653035, Length=512, Percent_Identity=20.5078125, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24648257, Length=522, Percent_Identity=23.3716475095785, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI21358303, Length=487, Percent_Identity=20.5338809034908, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI161076582, Length=518, Percent_Identity=20.2702702702703, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI21356947, Length=357, Percent_Identity=23.5294117647059, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24648253, Length=521, Percent_Identity=21.4971209213052, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24648255, Length=521, Percent_Identity=21.3051823416507, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI21356441, Length=528, Percent_Identity=21.0227272727273, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR001242 - InterPro: IPR013624 - InterPro: IPR010060 - InterPro: IPR006163 - InterPro: IPR006162 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF08415 NRPS; PF00550 PP-binding [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 59403; Mature: 59272
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNHLLHHQLTNTSWRCPEKEAVIAVDRSISYQELEERSNQLASVLMRAGVQKGDRVGIF CCCCCHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LPKSIESLISLFAILKNGSTYVPIDPRLPSGRIEYILQNCDIACMISSSATLKKVLADLS CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCEEEEECCCHHHHHHHHHCC DDLALKKVILTDWDGDENEKPEGHPQFIPWTSIRDEDGQRNPGPDIADVNPAYILYTSGS CCHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC TGTPKGVAISHLNSLTFVNMAAEYFGIDTPDRLASFAPLHFDLSIFDIFTAVRQGASIVL CCCCCCEEHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCEEECHHHHHHHHHHHCCCEEEE VPEFYSTFPIRLAEYIDKQRVTVWNSVSSVLIMLVDMGKLEKCGFETLRLIHFSGDILPP ECHHHCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCHHHCCHHHEEEEEECCCCCCH RYLRELKSHMKNADFYNIYGQTEANSSMCYHIGAVPPGDHWKIPIGKPFPNFEVFAVNED HHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEECCCCCCCCEEEEEECCC GRKISSPGQEGELYVKSSTVAVGYWNDGERTKERFTSNPLDPADASRCYKTGDIVKLDDK CCCCCCCCCCCEEEEEEEEEEEEEECCCHHHHHHHCCCCCCCCHHHHHCCCCCEEEECCC GNFVFVGRKDSMVKSRGYRIELNEIEIILNGHPLVRQAVAVAAPDEKIGHLVVGFASLVE CCEEEEECCCCHHHCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHC GESLSEIDLLRYCQDRLPKYMVPESIHFLKRLPTTSSGKVDRKAMEKEALEG CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure PNHLLHHQLTNTSWRCPEKEAVIAVDRSISYQELEERSNQLASVLMRAGVQKGDRVGIF CCCCHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LPKSIESLISLFAILKNGSTYVPIDPRLPSGRIEYILQNCDIACMISSSATLKKVLADLS CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCEEEEECCCHHHHHHHHHCC DDLALKKVILTDWDGDENEKPEGHPQFIPWTSIRDEDGQRNPGPDIADVNPAYILYTSGS CCHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC TGTPKGVAISHLNSLTFVNMAAEYFGIDTPDRLASFAPLHFDLSIFDIFTAVRQGASIVL CCCCCCEEHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCEEECHHHHHHHHHHHCCCEEEE VPEFYSTFPIRLAEYIDKQRVTVWNSVSSVLIMLVDMGKLEKCGFETLRLIHFSGDILPP ECHHHCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCHHHCCHHHEEEEEECCCCCCH RYLRELKSHMKNADFYNIYGQTEANSSMCYHIGAVPPGDHWKIPIGKPFPNFEVFAVNED HHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEECCCCCCCCEEEEEECCC GRKISSPGQEGELYVKSSTVAVGYWNDGERTKERFTSNPLDPADASRCYKTGDIVKLDDK CCCCCCCCCCCEEEEEEEEEEEEEECCCHHHHHHHCCCCCCCCHHHHHCCCCCEEEECCC GNFVFVGRKDSMVKSRGYRIELNEIEIILNGHPLVRQAVAVAAPDEKIGHLVVGFASLVE CCEEEEECCCCHHHCCCCEEEEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHC GESLSEIDLLRYCQDRLPKYMVPESIHFLKRLPTTSSGKVDRKAMEKEALEG CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9427658 [H]