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The map label for this gene is wrbA

Identifier: 85858197

GI number: 85858197

Start: 348821

End: 349432

Strand: Direct

Name: wrbA

Synonym: SYN_00514

Alternate gene names: 85858197

Gene position: 348821-349432 (Clockwise)

Preceding gene: 85858196

Following gene: 85858198

Centisome position: 10.97

GC content: 56.37

Gene sequence:

>612_bases
ATGAAGATTATGGTTGTTTATTACTCGGCCTACGGTCACGTGCACCGTCTGGCCGAGGCCGTGGCTGAAGGGGCGAGTGA
AATCGTTGACGTCGAGGTCGTAATGCGGCGTGTTCCGGAAACCCTTCCTGAAGCACTTCTGAAGAAGATCGGTGTTTTTG
AAGCTCAGCAGGCCTTTGCCCATGTTCCCGTCTGTGAGGTGGCGGAACTGGAGACGGCGGATGCGATTCTCTTCGGCACT
CCCGCCCGCTTCGGGAATATGTGCGGACAGATGCGCTCCTTTCTGGATGCAACGGGCGGCCTGTGGGCCAAAGGGGCGCT
GGTCGGCAAGGTGGGCAGTGTTTTCACCAGTACGGGTACGCAGCACGGCGGTCAGGAGTCCACCATTCTCAGCTTCCATA
CGACACTCCTTCATCACGGTATGATCATTGTGGGACTGCCGTATACGTTTCAGGGGCAGTCAAGGAATGACGAGATTACA
GGTTGTTCACCCTACGGCGCATCCACGATTGCCGGGTCAGCGAATGATCGATGGCCCACCGAAAATGAACTGGCCGGAGC
GAATTTTCAGGGGCGTCATGTGGCCTGCATTGCCGGGAAACTTTTTCAGTAA

Upstream 100 bases:

>100_bases
CTTATGCTGATTAAAAGGCATTTCGAATGCCGGATAAAAGAGTTCCGTAAAATGTTTTATTGGAAAGAATCCTGAAAAAC
GATTTGAAAGGAGGGACATT

Downstream 100 bases:

>100_bases
GGAAGCCGGAAAAGATCACGCGCATTCCTCAGGCGGCAGCCGGAGGAATGCGTCGTTTCAAGGGAGTTCTTGACTTTCAA
TGAGCCGTTCCCTATACTCC

Product: TrpR binding protein WrbA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKIMVVYYSAYGHVHRLAEAVAEGASEIVDVEVVMRRVPETLPEALLKKIGVFEAQQAFAHVPVCEVAELETADAILFGT
PARFGNMCGQMRSFLDATGGLWAKGALVGKVGSVFTSTGTQHGGQESTILSFHTTLLHHGMIIVGLPYTFQGQSRNDEIT
GCSPYGASTIAGSANDRWPTENELAGANFQGRHVACIAGKLFQ

Sequences:

>Translated_203_residues
MKIMVVYYSAYGHVHRLAEAVAEGASEIVDVEVVMRRVPETLPEALLKKIGVFEAQQAFAHVPVCEVAELETADAILFGT
PARFGNMCGQMRSFLDATGGLWAKGALVGKVGSVFTSTGTQHGGQESTILSFHTTLLHHGMIIVGLPYTFQGQSRNDEIT
GCSPYGASTIAGSANDRWPTENELAGANFQGRHVACIAGKLFQ
>Mature_203_residues
MKIMVVYYSAYGHVHRLAEAVAEGASEIVDVEVVMRRVPETLPEALLKKIGVFEAQQAFAHVPVCEVAELETADAILFGT
PARFGNMCGQMRSFLDATGGLWAKGALVGKVGSVFTSTGTQHGGQESTILSFHTTLLHHGMIIVGLPYTFQGQSRNDEIT
GCSPYGASTIAGSANDRWPTENELAGANFQGRHVACIAGKLFQ

Specific function: Seems To Enhance The Formation And/Or Stability Of Noncovalent Complexes Between The Trp Repressor Protein And Operator-Bearing DNA. However, Wrba Does Not Specifically Influence The Affinity Or Mode Of Binding Of Trpr To Its Operator. It Seems Possible T

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain

Homologues:

Organism=Escherichia coli, GI1787239, Length=200, Percent_Identity=55, Blast_Score=206, Evalue=6e-55,
Organism=Saccharomyces cerevisiae, GI6319849, Length=204, Percent_Identity=42.156862745098, Blast_Score=144, Evalue=9e-36,
Organism=Saccharomyces cerevisiae, GI6320235, Length=193, Percent_Identity=42.4870466321244, Blast_Score=130, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6319526, Length=201, Percent_Identity=31.3432835820896, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): WRBA_SYNAS (Q2LPM7)

Other databases:

- EMBL:   CP000252
- RefSeq:   YP_460399.1
- ProteinModelPortal:   Q2LPM7
- SMR:   Q2LPM7
- STRING:   Q2LPM7
- GeneID:   3884431
- GenomeReviews:   CP000252_GR
- KEGG:   sat:SYN_00514
- NMPDR:   fig|56780.10.peg.345
- eggNOG:   COG0655
- HOGENOM:   HBG686708
- OMA:   PAQFKAF
- PhylomeDB:   Q2LPM7
- ProtClustDB:   PRK03767
- BioCyc:   SACI56780:SYN_00514-MONOMER
- HAMAP:   MF_01017
- InterPro:   IPR008254
- InterPro:   IPR010089
- InterPro:   IPR005025
- TIGRFAMs:   TIGR01755

Pfam domain/function: PF03358 FMN_red

EC number: NA

Molecular weight: Translated: 21714; Mature: 21714

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIMVVYYSAYGHVHRLAEAVAEGASEIVDVEVVMRRVPETLPEALLKKIGVFEAQQAFA
CEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHH
HVPVCEVAELETADAILFGTPARFGNMCGQMRSFLDATGGLWAKGALVGKVGSVFTSTGT
CCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHCCCC
QHGGQESTILSFHTTLLHHGMIIVGLPYTFQGQSRNDEITGCSPYGASTIAGSANDRWPT
CCCCCCCHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ENELAGANFQGRHVACIAGKLFQ
CCCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MKIMVVYYSAYGHVHRLAEAVAEGASEIVDVEVVMRRVPETLPEALLKKIGVFEAQQAFA
CEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHH
HVPVCEVAELETADAILFGTPARFGNMCGQMRSFLDATGGLWAKGALVGKVGSVFTSTGT
CCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHCCCC
QHGGQESTILSFHTTLLHHGMIIVGLPYTFQGQSRNDEITGCSPYGASTIAGSANDRWPT
CCCCCCCHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ENELAGANFQGRHVACIAGKLFQ
CCCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA