| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858196
Identifier: 85858196
GI number: 85858196
Start: 348222
End: 348620
Strand: Direct
Name: 85858196
Synonym: SYN_00513
Alternate gene names: NA
Gene position: 348222-348620 (Clockwise)
Preceding gene: 85858195
Following gene: 85858197
Centisome position: 10.95
GC content: 53.13
Gene sequence:
>399_bases ATGAACTGGTTTTTTCTTCATGTCGGATTCATGTTGACCGCAGCCGGTTTTTTAATGATCGGGGTGACGGTGGCCATGAC TTTGCGGCGTAATCGCTGGTGGCTGAAGATCCATCGACGGGCAGGCATCGGCGGAGCCGGCCTCATGGCGTCAGGGTTTC TCGCTGCCGTTCTTATGATTTCCCTTTCCGGCCGGCCGCATTTTGGTAATCCTCATACCTGGCTGGGCGGATTGACGCTG GCTGCAGCATTTTCGACGCTTACTCTGGGATTTTTACAGTTTCGCCTGCCGGCTTATGGGGGGACGATTCGATGGATACA TCGGATGTCAGGACGTCTGACCGTGATTCTGGCGATAGTTACTATCTCTTTCGGACTGATTCTGGTCGGTTTTCTCTAA
Upstream 100 bases:
>100_bases TTCATGCCGGGCTGCGTTCGAAAGTTCAACTGAGAGACGGGCAGGCGGTGCAGCTCGATCTCGGAGCAGAAAGAAGACAA AAGAGTAGCGGGATGTCGCC
Downstream 100 bases:
>100_bases AATTGAAAAAGGGGATTCAAAGGGAGAATGTCTGCCTTTCCTTTATAACCCCGGATGCTTTTTTGCAGGAAAAAAAGCAG GAGATTTTTTTAAGTAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MNWFFLHVGFMLTAAGFLMIGVTVAMTLRRNRWWLKIHRRAGIGGAGLMASGFLAAVLMISLSGRPHFGNPHTWLGGLTL AAAFSTLTLGFLQFRLPAYGGTIRWIHRMSGRLTVILAIVTISFGLILVGFL
Sequences:
>Translated_132_residues MNWFFLHVGFMLTAAGFLMIGVTVAMTLRRNRWWLKIHRRAGIGGAGLMASGFLAAVLMISLSGRPHFGNPHTWLGGLTL AAAFSTLTLGFLQFRLPAYGGTIRWIHRMSGRLTVILAIVTISFGLILVGFL >Mature_132_residues MNWFFLHVGFMLTAAGFLMIGVTVAMTLRRNRWWLKIHRRAGIGGAGLMASGFLAAVLMISLSGRPHFGNPHTWLGGLTL AAAFSTLTLGFLQFRLPAYGGTIRWIHRMSGRLTVILAIVTISFGLILVGFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14474; Mature: 14474
Theoretical pI: Translated: 13.10; Mature: 13.10
Prosite motif: PS50939 CYTOCHROME_B561
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWFFLHVGFMLTAAGFLMIGVTVAMTLRRNRWWLKIHRRAGIGGAGLMASGFLAAVLMI CCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH SLSGRPHFGNPHTWLGGLTLAAAFSTLTLGFLQFRLPAYGGTIRWIHRMSGRLTVILAIV HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHH TISFGLILVGFL HHHHHHHHHHCC >Mature Secondary Structure MNWFFLHVGFMLTAAGFLMIGVTVAMTLRRNRWWLKIHRRAGIGGAGLMASGFLAAVLMI CCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH SLSGRPHFGNPHTWLGGLTLAAAFSTLTLGFLQFRLPAYGGTIRWIHRMSGRLTVILAIV HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHH TISFGLILVGFL HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA