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The map label for this gene is crtI [H]

Identifier: 85374804

GI number: 85374804

Start: 2007217

End: 2008671

Strand: Direct

Name: crtI [H]

Synonym: ELI_09885

Alternate gene names: 85374804

Gene position: 2007217-2008671 (Clockwise)

Preceding gene: 85374803

Following gene: 85374805

Centisome position: 65.76

GC content: 62.75

Gene sequence:

>1455_bases
ATGGCGCTCGCCATGCGGCTGCAGAGCGCAGGGATCGCCACCACCGTGATCGAAGGGCGCGACAAGCCCGGCGGCCGCGC
CTATTACTGGGAACGCGAGGGCTTCACCTTCGACGGCGGGCCGACCGTCGTCACCGACCCCGATTGCCTCAAGGAATTGT
GGGAAGTGTCCGGCCACGACATGGCCGACGATGTCGAGCTGATGCGGGTCAAGCCGTTCTACCGGCTCAATTGGCCCGAC
GGGCACAATTTCGATTATTCGAACGATCACGACGAGCTGTTCAAGGAGATCGCGGAGCTCAATCCCAAAGATGTCGAAGG
CTACCAGCGTTTCCTCGAATACAGCGCGGGCGTATACGAGGAAGGTTACGTCAAGCTCGGCACCGTGCCCTTCCTCGACT
TCAAGTCGATGCTCAAGGCGGCCCCGGCGCTGACCAAGAAGCAGGCGTGGCGCAGCGTCTATTCGATGGTCTCCAGCTTC
GTCGAGAACGAGAAGCTGCGCGAGGCGCTGAGCTTCCACACCCTGCTGGTCGGCGGCAACCCGATGAAGACCAGCGCGAT
CTATGCGCTGATCCACAAGCTGGAGATGGATGGCGGCGTGTGGTGGACGCGCGGCGGCACCAACCGCCTGATCGCCGGCA
TGATCCGCCATTTCGAGCGGCTTGGCGGAAAAATGATCGTCGGCGACCCGGTGGTGCAGGTGCATACCGAGAACGACAAG
GCGACCGAAGTCGAAACGCAAAGCGGCTTCAGGCAGCGCTTCGATGCCGTCGCTTCCAATGCCGATATCATGCATTCCTA
CCGCGATCTGCTGGGCCGCAGCCAGCGCGGCTGGCGCATGGGCAAGAAGCTCGCACGCAAGAGCTTCAGCCCCGGGCTGT
TCGTGGTCCATTTCGGCCTCGAAGGCAGCTGGCCCGGTATCCCGCACCACATGATCCTGTTCGGGCCGCGCTACAAAGGA
TTGCTGGACGACATCTACGACAACGGCGTGTTGCCGCAGGATTTCAGCATCTACCTGCACCACCCCACCGTGACCGACCC
GAGCATGGCCCCGCCGGGCAAGAGCACGTTCTACGCGCTGGTTCCGGTCGCCCACATGGGCAAGCTCAAGGTCGACTGGG
ACGAGATCGGCCCGATCCTGGAGAAGCGCATCCTCGACGAAGTCGGTCGCCGCCTGATCCCCGACATCCACGACCGGATC
GTCACCAAGTTCAGCTATGCGCCCAAGGATTTCGCGCACGATTTGAACGCGCATCTGGGCAGCGCTTTCAGCCTCGAACC
GGTGCTGTGGCAAAGCGCTTACCTGCGCGGCCACAACCGCGACGACGTGATCGATAACTTCTACCTCGTCGGCGCAGGTA
CGCATCCGGGCGCAGGCATTCCCGGCGTCGTCGGCAGCGCGAAAGCCACCGCAGGCTTGATGATCGAGGATTTGCTCGCC
AAAGCGGCGGCATGA

Upstream 100 bases:

>100_bases
AGAGTGCGCCGCTGGTGGTGCCGGACAGAACGAAAGGTCGCGTGTCGACATGAGTGCAGAAGGCAGGACAGCCTGCGTTA
TAGGGTCGGGCTTCGGCGGT

Downstream 100 bases:

>100_bases
AACGTCTCGCTGTCTATTGCGGCTCTGCCACGCCGGACGACCCGCGCTACATCGAACTCGCGCGCGAAGTCGGCGCCGGG
CTTGCCGAGCGCGATATCGG

Product: phytoene dehydrogenase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MALAMRLQSAGIATTVIEGRDKPGGRAYYWEREGFTFDGGPTVVTDPDCLKELWEVSGHDMADDVELMRVKPFYRLNWPD
GHNFDYSNDHDELFKEIAELNPKDVEGYQRFLEYSAGVYEEGYVKLGTVPFLDFKSMLKAAPALTKKQAWRSVYSMVSSF
VENEKLREALSFHTLLVGGNPMKTSAIYALIHKLEMDGGVWWTRGGTNRLIAGMIRHFERLGGKMIVGDPVVQVHTENDK
ATEVETQSGFRQRFDAVASNADIMHSYRDLLGRSQRGWRMGKKLARKSFSPGLFVVHFGLEGSWPGIPHHMILFGPRYKG
LLDDIYDNGVLPQDFSIYLHHPTVTDPSMAPPGKSTFYALVPVAHMGKLKVDWDEIGPILEKRILDEVGRRLIPDIHDRI
VTKFSYAPKDFAHDLNAHLGSAFSLEPVLWQSAYLRGHNRDDVIDNFYLVGAGTHPGAGIPGVVGSAKATAGLMIEDLLA
KAAA

Sequences:

>Translated_484_residues
MALAMRLQSAGIATTVIEGRDKPGGRAYYWEREGFTFDGGPTVVTDPDCLKELWEVSGHDMADDVELMRVKPFYRLNWPD
GHNFDYSNDHDELFKEIAELNPKDVEGYQRFLEYSAGVYEEGYVKLGTVPFLDFKSMLKAAPALTKKQAWRSVYSMVSSF
VENEKLREALSFHTLLVGGNPMKTSAIYALIHKLEMDGGVWWTRGGTNRLIAGMIRHFERLGGKMIVGDPVVQVHTENDK
ATEVETQSGFRQRFDAVASNADIMHSYRDLLGRSQRGWRMGKKLARKSFSPGLFVVHFGLEGSWPGIPHHMILFGPRYKG
LLDDIYDNGVLPQDFSIYLHHPTVTDPSMAPPGKSTFYALVPVAHMGKLKVDWDEIGPILEKRILDEVGRRLIPDIHDRI
VTKFSYAPKDFAHDLNAHLGSAFSLEPVLWQSAYLRGHNRDDVIDNFYLVGAGTHPGAGIPGVVGSAKATAGLMIEDLLA
KAAA
>Mature_483_residues
ALAMRLQSAGIATTVIEGRDKPGGRAYYWEREGFTFDGGPTVVTDPDCLKELWEVSGHDMADDVELMRVKPFYRLNWPDG
HNFDYSNDHDELFKEIAELNPKDVEGYQRFLEYSAGVYEEGYVKLGTVPFLDFKSMLKAAPALTKKQAWRSVYSMVSSFV
ENEKLREALSFHTLLVGGNPMKTSAIYALIHKLEMDGGVWWTRGGTNRLIAGMIRHFERLGGKMIVGDPVVQVHTENDKA
TEVETQSGFRQRFDAVASNADIMHSYRDLLGRSQRGWRMGKKLARKSFSPGLFVVHFGLEGSWPGIPHHMILFGPRYKGL
LDDIYDNGVLPQDFSIYLHHPTVTDPSMAPPGKSTFYALVPVAHMGKLKVDWDEIGPILEKRILDEVGRRLIPDIHDRIV
TKFSYAPKDFAHDLNAHLGSAFSLEPVLWQSAYLRGHNRDDVIDNFYLVGAGTHPGAGIPGVVGSAKATAGLMIEDLLAK
AAA

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 54084; Mature: 53953

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: PS00982 PHYTOENE_DH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAMRLQSAGIATTVIEGRDKPGGRAYYWEREGFTFDGGPTVVTDPDCLKELWEVSGHD
CCCEEEECCCCCEEEEEECCCCCCCCEEEEECCCEEECCCCEEECCHHHHHHHHHCCCCC
MADDVELMRVKPFYRLNWPDGHNFDYSNDHDELFKEIAELNPKDVEGYQRFLEYSAGVYE
CCCCCHHEEECCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
EGYVKLGTVPFLDFKSMLKAAPALTKKQAWRSVYSMVSSFVENEKLREALSFHTLLVGGN
CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC
PMKTSAIYALIHKLEMDGGVWWTRGGTNRLIAGMIRHFERLGGKMIVGDPVVQVHTENDK
CCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCC
ATEVETQSGFRQRFDAVASNADIMHSYRDLLGRSQRGWRMGKKLARKSFSPGLFVVHFGL
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECC
EGSWPGIPHHMILFGPRYKGLLDDIYDNGVLPQDFSIYLHHPTVTDPSMAPPGKSTFYAL
CCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEE
VPVAHMGKLKVDWDEIGPILEKRILDEVGRRLIPDIHDRIVTKFSYAPKDFAHDLNAHLG
EEHHHCCCEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHC
SAFSLEPVLWQSAYLRGHNRDDVIDNFYLVGAGTHPGAGIPGVVGSAKATAGLMIEDLLA
CCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
KAAA
HHCC
>Mature Secondary Structure 
ALAMRLQSAGIATTVIEGRDKPGGRAYYWEREGFTFDGGPTVVTDPDCLKELWEVSGHD
CCEEEECCCCCEEEEEECCCCCCCCEEEEECCCEEECCCCEEECCHHHHHHHHHCCCCC
MADDVELMRVKPFYRLNWPDGHNFDYSNDHDELFKEIAELNPKDVEGYQRFLEYSAGVYE
CCCCCHHEEECCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
EGYVKLGTVPFLDFKSMLKAAPALTKKQAWRSVYSMVSSFVENEKLREALSFHTLLVGGN
CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC
PMKTSAIYALIHKLEMDGGVWWTRGGTNRLIAGMIRHFERLGGKMIVGDPVVQVHTENDK
CCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCC
ATEVETQSGFRQRFDAVASNADIMHSYRDLLGRSQRGWRMGKKLARKSFSPGLFVVHFGL
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECC
EGSWPGIPHHMILFGPRYKGLLDDIYDNGVLPQDFSIYLHHPTVTDPSMAPPGKSTFYAL
CCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEE
VPVAHMGKLKVDWDEIGPILEKRILDEVGRRLIPDIHDRIVTKFSYAPKDFAHDLNAHLG
EEHHHCCCEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHC
SAFSLEPVLWQSAYLRGHNRDDVIDNFYLVGAGTHPGAGIPGVVGSAKATAGLMIEDLLA
CCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
KAAA
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7592436 [H]