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The map label for this gene is crtY [H]

Identifier: 85374803

GI number: 85374803

Start: 2005967

End: 2007169

Strand: Direct

Name: crtY [H]

Synonym: ELI_09880

Alternate gene names: 85374803

Gene position: 2005967-2007169 (Clockwise)

Preceding gene: 85374801

Following gene: 85374804

Centisome position: 65.72

GC content: 64.42

Gene sequence:

>1203_bases
ATGAACGGGCGCAGGGCAGATCTGGCGATTGTTGGCGGCGGCCTGTCGGGCGGCCTGATCGCGCTGGCGCTGAGGAACGC
GCGGCCCGAGCTCGACGTCAGGCTGATAGAAGCGGGCGAGAGGCTGGGCGGCAATCACCGCTGGAGCTGGTTCGAGAACG
ATCTCGGCAAAAGCGGCAACGAACTCATGCAGCCGTTTCGCAAGACCGAATGGCAGGGCTACGATGTTTATTTCCCGAAA
TATTCCCGCCGTCTGAAATCTCGCTACTATTCTCTGGCATCGCCCGATTTCGACGCCGGATTGCGGCGGGAATTGGCGCA
AGACACTGTTCATACCGGCAGGAAAGTGGTGGAATGCACGCCTGACAGTGTCACGCTGGAAGGGGGAGACGCCATACCGG
CCCGTGCCGTGGTGGATTGCCGAGGGTTCGAGCCGAGCGAGCTCGTGCGTGGCGGCTGGCAGGTCTTCATGGGCCGCCAC
CTGCGCACCCATGCCCCGCACGGCATTACCCGACCGGTCATCATGGACGTGACCGTAGAACAGCTCGACGGCTACCGCTT
CGTTTACGTCCTCCCGCTCGGCGCAAGCGACATCTTCATCGAGGACACCTATTACAATTCCAACCCCGAGCTGGATCGCG
GCGCGCTGTCGAGCCGGCTCGACCGATATTGCCGCCAGAACGGGTGGGAAGGCGACATCGTCGGCAGCGAGACCGGGGTC
CTGCCGGTCATTACCGGCGGCGATTTCGCTGCCTATCGCCGCGAGCGCGAGCTCGACCGGATGCCGCAGGCGGGTGCCCG
CGCGCTGCTGGCCCACCCGCTGACCAGCTACACCCTGCCGCAGGCGGTCGAAACCGCGCGCCTGATCGCGCGCAACGCGG
ACCTGCCTGGCGACCAGCTGGCCGCGCTGCTCGCCGCCCATGCCCAGCGGCACTGGAATCGCACGAGCTATTACCGCCTA
TTGGGCAGGATACTTTTCGAAGCCCCGCAGCCTAAGGAACGCTATCGAATCTTCGAGCGTTTCTACACACTCGACGAGGA
CTTGATCGAGCGGTTCTATGCCGCGCGTTCGCGCCCGCAGGAAAAGGCCCGCGTTTTGTGGGGCAATCCGCCGGTCGCGA
TCCACCGCGCCATCGCGGCGATCTTCAGCAAGAGTGCGCCGCTGGTGGTGCCGGACAGAACGAAAGGTCGCGTGTCGACA
TGA

Upstream 100 bases:

>100_bases
TCCCTTCCTTGCCCCTGAAACGGACCAGACCCGCCCCGGTTCCGCCCCGCGCTGCTTTGCCATTGCCCCGGACCACCGCA
CCGCTTAGGCCGGGCGCACA

Downstream 100 bases:

>100_bases
GTGCAGAAGGCAGGACAGCCTGCGTTATAGGGTCGGGCTTCGGCGGTATGGCGCTCGCCATGCGGCTGCAGAGCGCAGGG
ATCGCCACCACCGTGATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MNGRRADLAIVGGGLSGGLIALALRNARPELDVRLIEAGERLGGNHRWSWFENDLGKSGNELMQPFRKTEWQGYDVYFPK
YSRRLKSRYYSLASPDFDAGLRRELAQDTVHTGRKVVECTPDSVTLEGGDAIPARAVVDCRGFEPSELVRGGWQVFMGRH
LRTHAPHGITRPVIMDVTVEQLDGYRFVYVLPLGASDIFIEDTYYNSNPELDRGALSSRLDRYCRQNGWEGDIVGSETGV
LPVITGGDFAAYRRERELDRMPQAGARALLAHPLTSYTLPQAVETARLIARNADLPGDQLAALLAAHAQRHWNRTSYYRL
LGRILFEAPQPKERYRIFERFYTLDEDLIERFYAARSRPQEKARVLWGNPPVAIHRAIAAIFSKSAPLVVPDRTKGRVST

Sequences:

>Translated_400_residues
MNGRRADLAIVGGGLSGGLIALALRNARPELDVRLIEAGERLGGNHRWSWFENDLGKSGNELMQPFRKTEWQGYDVYFPK
YSRRLKSRYYSLASPDFDAGLRRELAQDTVHTGRKVVECTPDSVTLEGGDAIPARAVVDCRGFEPSELVRGGWQVFMGRH
LRTHAPHGITRPVIMDVTVEQLDGYRFVYVLPLGASDIFIEDTYYNSNPELDRGALSSRLDRYCRQNGWEGDIVGSETGV
LPVITGGDFAAYRRERELDRMPQAGARALLAHPLTSYTLPQAVETARLIARNADLPGDQLAALLAAHAQRHWNRTSYYRL
LGRILFEAPQPKERYRIFERFYTLDEDLIERFYAARSRPQEKARVLWGNPPVAIHRAIAAIFSKSAPLVVPDRTKGRVST
>Mature_400_residues
MNGRRADLAIVGGGLSGGLIALALRNARPELDVRLIEAGERLGGNHRWSWFENDLGKSGNELMQPFRKTEWQGYDVYFPK
YSRRLKSRYYSLASPDFDAGLRRELAQDTVHTGRKVVECTPDSVTLEGGDAIPARAVVDCRGFEPSELVRGGWQVFMGRH
LRTHAPHGITRPVIMDVTVEQLDGYRFVYVLPLGASDIFIEDTYYNSNPELDRGALSSRLDRYCRQNGWEGDIVGSETGV
LPVITGGDFAAYRRERELDRMPQAGARALLAHPLTSYTLPQAVETARLIARNADLPGDQLAALLAAHAQRHWNRTSYYRL
LGRILFEAPQPKERYRIFERFYTLDEDLIERFYAARSRPQEKARVLWGNPPVAIHRAIAAIFSKSAPLVVPDRTKGRVST

Specific function: Catalyzes the cyclization reaction which converts lycopene to beta-carotene [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008461
- InterPro:   IPR010108
- InterPro:   IPR008671 [H]

Pfam domain/function: PF05834 Lycopene_cycl [H]

EC number: NA

Molecular weight: Translated: 45083; Mature: 45083

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGRRADLAIVGGGLSGGLIALALRNARPELDVRLIEAGERLGGNHRWSWFENDLGKSGN
CCCCEEEEEEEECCCCCCHHHEEHHCCCCCCCEEEEHHHHHCCCCCCCCHHHHHHCCCCH
ELMQPFRKTEWQGYDVYFPKYSRRLKSRYYSLASPDFDAGLRRELAQDTVHTGRKVVECT
HHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEC
PDSVTLEGGDAIPARAVVDCRGFEPSELVRGGWQVFMGRHLRTHAPHGITRPVIMDVTVE
CCEEEECCCCCCCCHHEEECCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEEHH
QLDGYRFVYVLPLGASDIFIEDTYYNSNPELDRGALSSRLDRYCRQNGWEGDIVGSETGV
HCCCEEEEEEEEECCCEEEEEECEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCE
LPVITGGDFAAYRRERELDRMPQAGARALLAHPLTSYTLPQAVETARLIARNADLPGDQL
EEEEECCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCCHHHH
AALLAAHAQRHWNRTSYYRLLGRILFEAPQPKERYRIFERFYTLDEDLIERFYAARSRPQ
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
EKARVLWGNPPVAIHRAIAAIFSKSAPLVVPDRTKGRVST
HHCEEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MNGRRADLAIVGGGLSGGLIALALRNARPELDVRLIEAGERLGGNHRWSWFENDLGKSGN
CCCCEEEEEEEECCCCCCHHHEEHHCCCCCCCEEEEHHHHHCCCCCCCCHHHHHHCCCCH
ELMQPFRKTEWQGYDVYFPKYSRRLKSRYYSLASPDFDAGLRRELAQDTVHTGRKVVECT
HHHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEC
PDSVTLEGGDAIPARAVVDCRGFEPSELVRGGWQVFMGRHLRTHAPHGITRPVIMDVTVE
CCEEEECCCCCCCCHHEEECCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEEHH
QLDGYRFVYVLPLGASDIFIEDTYYNSNPELDRGALSSRLDRYCRQNGWEGDIVGSETGV
HCCCEEEEEEEEECCCEEEEEECEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCE
LPVITGGDFAAYRRERELDRMPQAGARALLAHPLTSYTLPQAVETARLIARNADLPGDQL
EEEEECCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCCHHHH
AALLAAHAQRHWNRTSYYRLLGRILFEAPQPKERYRIFERFYTLDEDLIERFYAARSRPQ
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
EKARVLWGNPPVAIHRAIAAIFSKSAPLVVPDRTKGRVST
HHCEEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8422926; 7808389 [H]